Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES10216
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:69260461:69264619:-1 gene:SORBI_3005G206500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCAACATCGCCATGGTGGCTGCTCCTCCATCGTCGTCGTGTGACAGTGACACCTAC
CTGCTGTTCCATGGCGAGACTCTGCTTTCCACCGGCGCCCGCGCCTCCCTCTACACCGTC
GCGCTCGCGTACTGCTTCATCGGACTGTCCGCGATCACCGCCCGGTTCTTCAAATCCATG
GAGCAGATCATGAAACACTCCCGGGAGGTGGTTGTCATTGACCCGCACACCAAGGAGCCT
GTTGTCAAGCACGAGAAGGTGTGGAACTACACTGTCGCGGACATTGCTCTGCTTGCGTTT
GGTACCAGTTTCCCTCAGATCTCCCTCGCCATCATCGACGCCATCCGAAATCTGGGTCAA
CTGACAGCAGGAGGTCTAGGTCCAGGCACACTTGTTGGTTCTGCGGCATTTGATCTGTTT
CCAATCCATGCTGTCTGTGTGGTTATGCCAAGGGCAGGGTCTAAGAAAAAGATCTCTGAC
TTGGGTGTTTGGTTGGTTGAGCTCGTCTGGTCTTTCTGGGCATATATTTGGCTCTATGTT
ATCTTAGAGGTGTGGACGCCTAAAGTGATCACCCTCTGGGAGGCACTGCTGACAGTCTTG
CAGTATGGGTTACTTCTGCTTCATGCATATGCACAGGATAAACGGTGGCCATTTGTATCC
ATCCCATTTGTGAGAGGTGAGAGGCCTGAAGATTGGGTTCCACCAGAAGATGTTTCTGTT
GATTACGACAACTGTGATGACACTAATGAGACACTCCCTATAAGTGCTAACCGGAATGAT
GGCATTGTAGACGTATTCTCTGCACATTCCTACCACATTGCAGAGTACAGTCGAGTTCCA
GAAAAGGATATGGAAGGATCATCAACAATGGATCAAGTTGTAAAGAACACACAAGAAGAT
ATATCCTGGCTTTCTATTTGGTGGCAACAATTTGTTGATGCTTCAATGTTGGAGAGCCCT
GAGTCAAGGAAGATGCATTCCATCTGCCTGAGGTTCACCACAATATTTTGGAACTTGATC
ATTGCGCCTTGGAAATTTTTGTTTGCTTTTGTGCCCCCATACAATATTGCACATGGCTGG
ATTGCTTTTATATGCTCACTGATCTTCATAAGTGGTATTGCTTATGGTGTTACTAAGCTT
ACAGATCAGATAAGCTGTGTCACAGGAGTAAGTCCATATGTTATTGCATTCACAGCACTG
GCTGCTGGAACCTCATGGCCAGATCTAGTTGCCAGCAAGATAGCTGCTGAGCGTCAAGTC
ACTGCAGACTCTGCAATAGCCAACATCACCTGCAGTAACTCGGTGAACATATATGTTGGC
ATTGGTGTTCCGTGGTTGATTGACACAGTGTACAACTTCTTCGTTTACCAGGAGCCATTG
TACATAGATAATGCTGCTGGTCTCAGCTTCTCCCTTCTAGTCTTCTTTGCGACATCATTT
GGATGTATTACGGTTTTGGTTCTGCGCCGCATTATACTCGGTGCTGAGCTTGGCGGCCCT
AGGCTATGGGCTTGGGTTACATCAGTCTACTTCATGATCCTTTGGGTTGTTTTTGTTGTT
TTTTCCTCTCTAAGAGTTTCAGGAGTAATATAG

Peptide Sequence

PEP ID

EES10216
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:69260461:69264619:-1 gene:SORBI_3005G206500 transcript:EES10216 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSNIAMVAAPPSSSCDSDTYLLFHGETLLSTGARASLYTVALAYCFIGLSAITARFFKSM
EQIMKHSREVVVIDPHTKEPVVKHEKVWNYTVADIALLAFGTSFPQISLAIIDAIRNLGQ
LTAGGLGPGTLVGSAAFDLFPIHAVCVVMPRAGSKKKISDLGVWLVELVWSFWAYIWLYV
ILEVWTPKVITLWEALLTVLQYGLLLLHAYAQDKRWPFVSIPFVRGERPEDWVPPEDVSV
DYDNCDDTNETLPISANRNDGIVDVFSAHSYHIAEYSRVPEKDMEGSSTMDQVVKNTQED
ISWLSIWWQQFVDASMLESPESRKMHSICLRFTTIFWNLIIAPWKFLFAFVPPYNIAHGW
IAFICSLIFISGIAYGVTKLTDQISCVTGVSPYVIAFTALAAGTSWPDLVASKIAAERQV
TADSAIANITCSNSVNIYVGIGVPWLIDTVYNFFVYQEPLYIDNAAGLSFSLLVFFATSF
GCITVLVLRRIILGAELGGPRLWAWVTSVYFMILWVVFVVFSSLRVSGVI

Transcript Sequence

Transcript ID

EES10216
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:69260461:69264619:-1 gene:SORBI_3005G206500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACCCCTCGCTAATACTCCTCCTATAATCGCCACCATCAAATTGGTGTGCGCGCGTGTGG
TGTGGCCGAAGCAGCGGCAGCATTTCAGCTCACAAATGCAGTAGCTTCCGTCACCGCTCC
CCACTATCAAATCTGTCGCAAGTTCACGAAGCACAGTACCGGCAGCACGGAATCTGCGGG
ACCGTCCTCGCCTGCGCCACCGCGGGGGTCCCGCGCCGCCCGGCTCCGGCGAGGCTGCGA
CCCGCCGCTGACTGCTGGTACTGGTAAGCCGCACCCGTCCCCGCCCATTCCTCTTCCGCG
GTCTCCTGGATGGCTGGACGCCCCCCTTCGTCTCCGGTTGGGATGCGATCCGATTCGTCG
CCTTTTTCTTTTCGGTGCTGTCCTTTTTGTTTTGCCTCGCCAAGAAGTTGGGAATGATCT
GTTGTCGTCTACCGTAAAAATGCAAACTTTTTTTTAATCCGTAGTACTATCGATTGGCTT
CGTCAATCTGCAGTCTTTGTGCCTCAATCAGGATCCCCTGATCCGCTCGCTATAATCTGC
AGTCTCAGAGCGGCGCATTGGACTGGACAGTGGAGCAGAGCAACGGGGCCTCGCCGTCGG
CGGAGAAGAAGGAGGCTGCAGCTGCTGTGCTTCGTGGTGATCCGATTCCTGCCACGGATT
GGACCACTGGTGCGTTCTTGTCCCCTCCTGTCTTGCTCCCATGGCCTCAGCGGAATCTGC
ACGATTTCGCCATGGCCATATGGCGCCTCTGCTTCAATATCAACATTTTTTCATAAAAAA
CTCTGCTGATGGATTAGATTTTTAATTACCTGTGTTATCCGTGATACAACAGGAACCAGC
TAGAATTCTTTTCCCAGCTTCTCGTCTCATCTGATGTCCAACATCGCCATGGTGGCTGCT
CCTCCATCGTCGTCGTGTGACAGTGACACCTACCTGCTGTTCCATGGCGAGACTCTGCTT
TCCACCGGCGCCCGCGCCTCCCTCTACACCGTCGCGCTCGCGTACTGCTTCATCGGACTG
TCCGCGATCACCGCCCGGTTCTTCAAATCCATGGAGCAGATCATGAAACACTCCCGGGAG
GTGGTTGTCATTGACCCGCACACCAAGGAGCCTGTTGTCAAGCACGAGAAGGTGTGGAAC
TACACTGTCGCGGACATTGCTCTGCTTGCGTTTGGTACCAGTTTCCCTCAGATCTCCCTC
GCCATCATCGACGCCATCCGAAATCTGGGTCAACTGACAGCAGGAGGTCTAGGTCCAGGC
ACACTTGTTGGTTCTGCGGCATTTGATCTGTTTCCAATCCATGCTGTCTGTGTGGTTATG
CCAAGGGCAGGGTCTAAGAAAAAGATCTCTGACTTGGGTGTTTGGTTGGTTGAGCTCGTC
TGGTCTTTCTGGGCATATATTTGGCTCTATGTTATCTTAGAGGTGTGGACGCCTAAAGTG
ATCACCCTCTGGGAGGCACTGCTGACAGTCTTGCAGTATGGGTTACTTCTGCTTCATGCA
TATGCACAGGATAAACGGTGGCCATTTGTATCCATCCCATTTGTGAGAGGTGAGAGGCCT
GAAGATTGGGTTCCACCAGAAGATGTTTCTGTTGATTACGACAACTGTGATGACACTAAT
GAGACACTCCCTATAAGTGCTAACCGGAATGATGGCATTGTAGACGTATTCTCTGCACAT
TCCTACCACATTGCAGAGTACAGTCGAGTTCCAGAAAAGGATATGGAAGGATCATCAACA
ATGGATCAAGTTGTAAAGAACACACAAGAAGATATATCCTGGCTTTCTATTTGGTGGCAA
CAATTTGTTGATGCTTCAATGTTGGAGAGCCCTGAGTCAAGGAAGATGCATTCCATCTGC
CTGAGGTTCACCACAATATTTTGGAACTTGATCATTGCGCCTTGGAAATTTTTGTTTGCT
TTTGTGCCCCCATACAATATTGCACATGGCTGGATTGCTTTTATATGCTCACTGATCTTC
ATAAGTGGTATTGCTTATGGTGTTACTAAGCTTACAGATCAGATAAGCTGTGTCACAGGA
GTAAGTCCATATGTTATTGCATTCACAGCACTGGCTGCTGGAACCTCATGGCCAGATCTA
GTTGCCAGCAAGATAGCTGCTGAGCGTCAAGTCACTGCAGACTCTGCAATAGCCAACATC
ACCTGCAGTAACTCGGTGAACATATATGTTGGCATTGGTGTTCCGTGGTTGATTGACACA
GTGTACAACTTCTTCGTTTACCAGGAGCCATTGTACATAGATAATGCTGCTGGTCTCAGC
TTCTCCCTTCTAGTCTTCTTTGCGACATCATTTGGATGTATTACGGTTTTGGTTCTGCGC
CGCATTATACTCGGTGCTGAGCTTGGCGGCCCTAGGCTATGGGCTTGGGTTACATCAGTC
TACTTCATGATCCTTTGGGTTGTTTTTGTTGTTTTTTCCTCTCTAAGAGTTTCAGGAGTA
ATATAGACCGGAAAACAAAGGTACTGGGGTTTGAATTTTCTGTTTTTCAGTTTTGTTATT
ACTACTGGTTTTCACATCCACAAAGAAAATGCCTATTGCGGCGAAGATTAGGGTCCTTGA
ATTAGGGATTATAGATACAAGTGCTTGTTATATATCATGGTTATTGAAGTCAACAATATA
TTGTACAACATAGTGGAAGTTGATCTCCCAGAAAGAAGGAAAACCAGCTGCATCGCTCTC
AAATATTGATTCAAACTCAGTGTTACTTGTATAATCAATCATACAACATGTAAATATCAA
GGCTTATGTGTAAGTTGCGTTGGCATTTTACTAGTACTATATTTTTATTGATTATCAACA
ATACATTTGAGTGG