Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES10000
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:64114092:64118521:-1 gene:SORBI_3005G165400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACAAAGATGGGCTCGAGATCACAAGCTGTGTCTGTCTCACCATCGGTACTACTCCTT
CAGTTCCTCGTGCTACTGCTGGCCCTGCTGTCTGCTGATGCATCCTCAAGCCAAACGACG
ATCTACGTTGTGTACATGGGTGAGAGGAAGGACGATGATCCTTCCGTGGTCATGGCATCG
CACCACGCCGCGCTGACCTCCATTCTTGGGAGCAAGGATGAAGCACGCAAGTCCATAGTC
TACAGCTATAAGCACGGATTCTCCGGTTTCGCGGCGAAGCTTACCGAGCCCCAAGCGGAG
GAGCTTAAGAAACACCATGGAGTTGTGAGCGTGAAGCCAAACACTTACCACCAAGTGCAC
ACGACTCGGAGTTGGGATTTTCTTGGCATCAGCTACGGCCAACAGCCATCGTCATTGTCG
TCGTCGTCGCGGCTCCTTAGGAAGGCCAAGTACGGCGAGGATGTCATCGTCGGCGTCATA
GACACAGGCATCTGGCCGGAATCACGGAGCTTCGACGACACCGGGTATGGCCCTGTGCCG
AAGCGGTGGAAAGGCGTGTGCGAGACCGGCCAGGCGTTCAACGCGAGCAACTGCAACCGG
AAGGTCATCGGCGCGCGGTGGTACGCCGGGGACGCCACCGAGGAGGACCTCAAGGGAGAG
TACAGGTCGGCGCGGGACGCCAACGGCCACGGCACGCACACCGCGTCGACGGTGGCCGGC
TCGCCGGTGCGGGACGCGAGCCACGCCGGCAGCGGCCTGGCCGCCGGCCTGGTGCGCGGC
GGGGCGCCGCGCGCGCGGCTCGCGATCTACAAGTCGTGCCACGCCGTCGGCCTCGACGCG
CGCTGCGGCGACGCGTCGGTCCTCGCGGCCCTCGACGACGCCATCGGGGACGGCGTCGAC
GTGCTGTCCCTGTCGCTGGGAGGCGTCAATGAGAAACCCGAGACGCTGCACGCCGTGGCG
GCCGGGATCACCGTGGTGTTCGCTGCGGGGAACGAAGGCCCCGTGCAGCAGACCGTCAAG
AACGCCCTGCCGTGGGTCATCACGGTGGCCGCCGCCACCGTGGATCGCTCCTTCCCAACC
GTCATCACACTCGGCGACGGACAGAAGATGGTGGGTCAATCATTGTACTACCACAACCGC
TCAGCGGCATCCAAGAGCAACAACGGCTTTACTTCGCTCCATTTCGCGGCTACTGGGTGC
GACAGGAAGAACCTGGGGTCTGGAAACATCACCGGGAAAATCATTGTATGCTTTGCACCG
GCAATCCCGTCCACCTATTCTCCAGGGGCGGAGTTTGTCAAGGCCACACAAGCCGCCATT
GCCGGCGGGGCGAAGGGCATAATCTTCGAGCAGTACAGCACCGACATCCTCGACTACCAG
CTGTACTGCCAAGGCCACATGCCCTGCGTCGTGGTGGACAAAGAAACCATATTCAGGATC
ATCCAAAGTAACAACAGTGTGGTAGCCAAGATATCTCCGGCGGCGACGGTGGTCGGAGCA
CAGGTTGCCTCACCGAGAGTCGCCACGTTCTCCTCCAGGGGCCCGAGTGCACAGTTCCCT
GGTATACTCAAGCCCGACATAGCTGCCCCTGGAGTGAGCATCTTGGCAGCCAAGGGTGAC
TCGTACGAGCTCATGTCCGGGACATCCATGGCATGCCCTCATGTCTCCGCGATCGTTGCC
TTGCTCAAGTCGGTTCACCTGGACTGGTCGCCTGCCATGATCAAGTCCGCCATCGTTACC
ACAGCATCGGTGACGGATCGATTCGGCCTGCCAATCCAAGCCAACTCAGTGCAAAGAAAA
CCGGCCGACCCCTTCGACTTCGGCAGCGGCCACATACAGCCAGACAGGGCCATGGATCCT
GGCCTGGTATACGACATCAAACCAGACGACTACAACAACGACGACCTCGACATTGAACAG
CTCAACCTGCCATCCATCGCCGTGCCTGACCTCAAGGAGTCCGTCACGCTCACACGCACG
GTGACCAACGTCGGGCCGGCGAAGGCGACGTACCGGGCGGTGGTGGAGGCGCCGGCGGGG
GTGAAGATGAGCGTGGAGCCTCCGGTGATCGCCTTCCAGAAAGGTGGCCCTAGGAACACG
ACATTTAAGGTGACGTTCATGGCGAAGCAGAGAGTGCAGGGCGGCTACGCGTTTGGGAGC
CTGACATGGTTGGACGATGGCAAGCACTCGGTGAGGATCCCTATCGCCGTTCGGACCGTC
GTAAGGGACTTCGTTGCTGATGCATCTTAA

Peptide Sequence

PEP ID

EES10000
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:64114092:64118521:-1 gene:SORBI_3005G165400 transcript:EES10000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTKMGSRSQAVSVSPSVLLLQFLVLLLALLSADASSSQTTIYVVYMGERKDDDPSVVMAS
HHAALTSILGSKDEARKSIVYSYKHGFSGFAAKLTEPQAEELKKHHGVVSVKPNTYHQVH
TTRSWDFLGISYGQQPSSLSSSSRLLRKAKYGEDVIVGVIDTGIWPESRSFDDTGYGPVP
KRWKGVCETGQAFNASNCNRKVIGARWYAGDATEEDLKGEYRSARDANGHGTHTASTVAG
SPVRDASHAGSGLAAGLVRGGAPRARLAIYKSCHAVGLDARCGDASVLAALDDAIGDGVD
VLSLSLGGVNEKPETLHAVAAGITVVFAAGNEGPVQQTVKNALPWVITVAAATVDRSFPT
VITLGDGQKMVGQSLYYHNRSAASKSNNGFTSLHFAATGCDRKNLGSGNITGKIIVCFAP
AIPSTYSPGAEFVKATQAAIAGGAKGIIFEQYSTDILDYQLYCQGHMPCVVVDKETIFRI
IQSNNSVVAKISPAATVVGAQVASPRVATFSSRGPSAQFPGILKPDIAAPGVSILAAKGD
SYELMSGTSMACPHVSAIVALLKSVHLDWSPAMIKSAIVTTASVTDRFGLPIQANSVQRK
PADPFDFGSGHIQPDRAMDPGLVYDIKPDDYNNDDLDIEQLNLPSIAVPDLKESVTLTRT
VTNVGPAKATYRAVVEAPAGVKMSVEPPVIAFQKGGPRNTTFKVTFMAKQRVQGGYAFGS
LTWLDDGKHSVRIPIAVRTVVRDFVADAS

Transcript Sequence

Transcript ID

EES10000
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:64114092:64118521:-1 gene:SORBI_3005G165400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAGAATATGACAAAGATGGGCTCGAGATCACAAGCTGTGTCTGTCTCACCATCGGTACTA
CTCCTTCAGTTCCTCGTGCTACTGCTGGCCCTGCTGTCTGCTGATGCATCCTCAAGCCAA
ACGACGATCTACGTTGTGTACATGGGTGAGAGGAAGGACGATGATCCTTCCGTGGTCATG
GCATCGCACCACGCCGCGCTGACCTCCATTCTTGGGAGCAAGGATGAAGCACGCAAGTCC
ATAGTCTACAGCTATAAGCACGGATTCTCCGGTTTCGCGGCGAAGCTTACCGAGCCCCAA
GCGGAGGAGCTTAAGAAACACCATGGAGTTGTGAGCGTGAAGCCAAACACTTACCACCAA
GTGCACACGACTCGGAGTTGGGATTTTCTTGGCATCAGCTACGGCCAACAGCCATCGTCA
TTGTCGTCGTCGTCGCGGCTCCTTAGGAAGGCCAAGTACGGCGAGGATGTCATCGTCGGC
GTCATAGACACAGGCATCTGGCCGGAATCACGGAGCTTCGACGACACCGGGTATGGCCCT
GTGCCGAAGCGGTGGAAAGGCGTGTGCGAGACCGGCCAGGCGTTCAACGCGAGCAACTGC
AACCGGAAGGTCATCGGCGCGCGGTGGTACGCCGGGGACGCCACCGAGGAGGACCTCAAG
GGAGAGTACAGGTCGGCGCGGGACGCCAACGGCCACGGCACGCACACCGCGTCGACGGTG
GCCGGCTCGCCGGTGCGGGACGCGAGCCACGCCGGCAGCGGCCTGGCCGCCGGCCTGGTG
CGCGGCGGGGCGCCGCGCGCGCGGCTCGCGATCTACAAGTCGTGCCACGCCGTCGGCCTC
GACGCGCGCTGCGGCGACGCGTCGGTCCTCGCGGCCCTCGACGACGCCATCGGGGACGGC
GTCGACGTGCTGTCCCTGTCGCTGGGAGGCGTCAATGAGAAACCCGAGACGCTGCACGCC
GTGGCGGCCGGGATCACCGTGGTGTTCGCTGCGGGGAACGAAGGCCCCGTGCAGCAGACC
GTCAAGAACGCCCTGCCGTGGGTCATCACGGTGGCCGCCGCCACCGTGGATCGCTCCTTC
CCAACCGTCATCACACTCGGCGACGGACAGAAGATGGTGGGTCAATCATTGTACTACCAC
AACCGCTCAGCGGCATCCAAGAGCAACAACGGCTTTACTTCGCTCCATTTCGCGGCTACT
GGGTGCGACAGGAAGAACCTGGGGTCTGGAAACATCACCGGGAAAATCATTGTATGCTTT
GCACCGGCAATCCCGTCCACCTATTCTCCAGGGGCGGAGTTTGTCAAGGCCACACAAGCC
GCCATTGCCGGCGGGGCGAAGGGCATAATCTTCGAGCAGTACAGCACCGACATCCTCGAC
TACCAGCTGTACTGCCAAGGCCACATGCCCTGCGTCGTGGTGGACAAAGAAACCATATTC
AGGATCATCCAAAGTAACAACAGTGTGGTAGCCAAGATATCTCCGGCGGCGACGGTGGTC
GGAGCACAGGTTGCCTCACCGAGAGTCGCCACGTTCTCCTCCAGGGGCCCGAGTGCACAG
TTCCCTGGTATACTCAAGCCCGACATAGCTGCCCCTGGAGTGAGCATCTTGGCAGCCAAG
GGTGACTCGTACGAGCTCATGTCCGGGACATCCATGGCATGCCCTCATGTCTCCGCGATC
GTTGCCTTGCTCAAGTCGGTTCACCTGGACTGGTCGCCTGCCATGATCAAGTCCGCCATC
GTTACCACAGCATCGGTGACGGATCGATTCGGCCTGCCAATCCAAGCCAACTCAGTGCAA
AGAAAACCGGCCGACCCCTTCGACTTCGGCAGCGGCCACATACAGCCAGACAGGGCCATG
GATCCTGGCCTGGTATACGACATCAAACCAGACGACTACAACAACGACGACCTCGACATT
GAACAGCTCAACCTGCCATCCATCGCCGTGCCTGACCTCAAGGAGTCCGTCACGCTCACA
CGCACGGTGACCAACGTCGGGCCGGCGAAGGCGACGTACCGGGCGGTGGTGGAGGCGCCG
GCGGGGGTGAAGATGAGCGTGGAGCCTCCGGTGATCGCCTTCCAGAAAGGTGGCCCTAGG
AACACGACATTTAAGGTGACGTTCATGGCGAAGCAGAGAGTGCAGGGCGGCTACGCGTTT
GGGAGCCTGACATGGTTGGACGATGGCAAGCACTCGGTGAGGATCCCTATCGCCGTTCGG
ACCGTCGTAAGGGACTTCGTTGCTGATGCATCTTAATTGATGATCGAGTTCGTTCTGGAC
AGGATGCATGGTACGCGCATGCATGTGTTCCGCGTTGTTGATTCACCCTTTCGATTTCCT
TGTCTCACTTTGCCTTTAATTTGGTTTACTGTCCGCCAGCCATTCGTGTTCTTGTAATAA
AAGAAAGGACGACGTGGAAACACTTCAATAATACCACCCCTATTCCAAGTCAGTTCTATA
TGTAACATTTGCCTGGGAAAAACACGATTTGATGACCAACAATAATATATAT