Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES09889
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:60714321:60718373:-1 gene:SORBI_3005G143500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATB description:hypothetical protein
Sequence

ATGGCTCTAACCCTCCTCCGAGGGATGAGGACGCCAGTCTCCTCCGGCTCAAACCCCGGC
CTCTTCTTCGCCGTTCTACGTCCTCGGCTGTCCCGCTTCACGGCTCGGGCGGAGAGTGCG
CAGGCCACGGAGCCCAAAGCGGCGCCCCCGCCCAGGTCGATTCAGCTGGCGACCAAGGAG
GCGGCGGAGCAGAAGACACAGGGCTTCGAAGCCGTCATCGGGATCGAGACCCACGTCCAG
CTCTCCACCGTCACCAAGGCGTTCTGCTCCTGCCCGTACAGCTACGGCGCCCAGCCCAAC
AGCACCGTCTGCCCCACCTGCATGGGCCACCCGGGGACGCTGCCGGTTCTCAACGAGAAG
GTGGTCGAGTGCGCCGTGAAGCTGGGGCTCGCACTCAACTGCGAGATCTCGATGACGTCC
AAGTTTGATCGCAAGCAGTATTTCTACCCGGACCTCCCCAAGGGGTACCAGATTTCGCAG
TTTGACATCCCCATTGCCAAGAAGGGTCATGTCGATTTGGACCTTCCGGTGGAGTTTGGT
GGTGGGCATAGGAAGTTTGGGATCACCAGGGTTCACATGGAAGAAGATGCAGGCAAGCTG
CTTCATTCTGAATCCAGCAGTTACTCTCAGGTCGACCTAAACAGGGCTGGTGTACCTTTG
CTTGAAATTGTCTCAGAGCCAGACATGAGAACAGGGATAGAGGCTGCTGAGTATGGTGCT
GAGCTGCAAAGGATCGTTAGGTACCTGGGAGTGAGTAATGGTAACATGCAAGAAGGTTCC
CTTCGTTGTGATGTGAATGTTTCTATTCGACCAGTTGGGCAATCAGAATTTGGCACAAAG
GTGGAAATAAAGAATATGAACTCATTTTCTGCGATAAATAGGGCAATCGATTATGAGATC
TCCCGGCAGATTCTGCTCCATAAAGAAGGCCAGGCTGATCAAATTGTACAAGAAACCCGC
CTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGAGAAAAAAGGAGGGACTTGCCGAC
TATAGATATTTTCCAGAACCCGATCTTCCTGAAGTAGTTCTCACTAGTGACTATATTAAT
GAAATCAGCAAGTCAATGCCGGAACTTCCAGAAGCAAAGCGTAGGCGTTATGAAAATATG
GGACTCAGCATGCAAGATGTTCTGTTCCTTGCTAATGATGATAATATTGGTCATTTCTAT
GATTCTACTCTTGAGCATGGTGCTGACGCAAAGCTGGCTGCCAACTGGATCATGGGTGAC
ATTGCTGCTTATCTCAAAGATGAAAAGGTCTCCATTGATGAAATTAAATTAACACCTCTA
GAGCTTTCTGAACTGATAGCATCCATTAAGAATGGAACAATAAGTGGGAAGATCGGCAAG
GAGATACTGGCCGAGCTCATTGCCAAAGGTGGAACAGTTAAGGGTGTGATAGAAGAGAAA
GATTTGGTTCAGATAGCAGATCCAGCAGCAATCGAGGCAATGGTGGATAAAGTAATTGCT
GATAATCCAAAGCAACTTGAGCAGTACCGTGCTGGAAAAACTAAGCTACAAGGATTTTTT
GCTGGCCAGGTGATGAAAGCATCGAAGGGCAAGGCCAACCCAGTTTTGTTGAATAAAATC
CTTGGAGAGAAGTTGAATGCCAATTAG

Peptide Sequence

PEP ID

EES09889
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:60714321:60718373:-1 gene:SORBI_3005G143500 transcript:EES09889 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATB description:hypothetical protein
Sequence

MALTLLRGMRTPVSSGSNPGLFFAVLRPRLSRFTARAESAQATEPKAAPPPRSIQLATKE
AAEQKTQGFEAVIGIETHVQLSTVTKAFCSCPYSYGAQPNSTVCPTCMGHPGTLPVLNEK
VVECAVKLGLALNCEISMTSKFDRKQYFYPDLPKGYQISQFDIPIAKKGHVDLDLPVEFG
GGHRKFGITRVHMEEDAGKLLHSESSSYSQVDLNRAGVPLLEIVSEPDMRTGIEAAEYGA
ELQRIVRYLGVSNGNMQEGSLRCDVNVSIRPVGQSEFGTKVEIKNMNSFSAINRAIDYEI
SRQILLHKEGQADQIVQETRLWDESSQKTFTMRKKEGLADYRYFPEPDLPEVVLTSDYIN
EISKSMPELPEAKRRRYENMGLSMQDVLFLANDDNIGHFYDSTLEHGADAKLAANWIMGD
IAAYLKDEKVSIDEIKLTPLELSELIASIKNGTISGKIGKEILAELIAKGGTVKGVIEEK
DLVQIADPAAIEAMVDKVIADNPKQLEQYRAGKTKLQGFFAGQVMKASKGKANPVLLNKI
LGEKLNAN

Transcript Sequence

Transcript ID

EES09889
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:60714321:60718373:-1 gene:SORBI_3005G143500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATB description:hypothetical protein
Sequence

CCAGCAGCGCGGCCACGCCCTCCCCTCCGCCGCTCCTCTTCCTCTGCGCCCCGGTCATCG
CCCACACCCGCTTCCGGCGGCCACGCCCTCCGCTTCTCCGTACTTGCTGCTCGCCCCGCC
CACCACCCCGTATTCTCCGCCAGCGATTCTAACCTCTGCGCGGCACGCGGCACACTCGCC
GACGATGGCTCTAACCCTCCTCCGAGGGATGAGGACGCCAGTCTCCTCCGGCTCAAACCC
CGGCCTCTTCTTCGCCGTTCTACGTCCTCGGCTGTCCCGCTTCACGGCTCGGGCGGAGAG
TGCGCAGGCCACGGAGCCCAAAGCGGCGCCCCCGCCCAGGTCGATTCAGCTGGCGACCAA
GGAGGCGGCGGAGCAGAAGACACAGGGCTTCGAAGCCGTCATCGGGATCGAGACCCACGT
CCAGCTCTCCACCGTCACCAAGGCGTTCTGCTCCTGCCCGTACAGCTACGGCGCCCAGCC
CAACAGCACCGTCTGCCCCACCTGCATGGGCCACCCGGGGACGCTGCCGGTTCTCAACGA
GAAGGTGGTCGAGTGCGCCGTGAAGCTGGGGCTCGCACTCAACTGCGAGATCTCGATGAC
GTCCAAGTTTGATCGCAAGCAGTATTTCTACCCGGACCTCCCCAAGGGGTACCAGATTTC
GCAGTTTGACATCCCCATTGCCAAGAAGGGTCATGTCGATTTGGACCTTCCGGTGGAGTT
TGGTGGTGGGCATAGGAAGTTTGGGATCACCAGGGTTCACATGGAAGAAGATGCAGGCAA
GCTGCTTCATTCTGAATCCAGCAGTTACTCTCAGGTCGACCTAAACAGGGCTGGTGTACC
TTTGCTTGAAATTGTCTCAGAGCCAGACATGAGAACAGGGATAGAGGCTGCTGAGTATGG
TGCTGAGCTGCAAAGGATCGTTAGGTACCTGGGAGTGAGTAATGGTAACATGCAAGAAGG
TTCCCTTCGTTGTGATGTGAATGTTTCTATTCGACCAGTTGGGCAATCAGAATTTGGCAC
AAAGGTGGAAATAAAGAATATGAACTCATTTTCTGCGATAAATAGGGCAATCGATTATGA
GATCTCCCGGCAGATTCTGCTCCATAAAGAAGGCCAGGCTGATCAAATTGTACAAGAAAC
CCGCCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGAGAAAAAAGGAGGGACTTGC
CGACTATAGATATTTTCCAGAACCCGATCTTCCTGAAGTAGTTCTCACTAGTGACTATAT
TAATGAAATCAGCAAGTCAATGCCGGAACTTCCAGAAGCAAAGCGTAGGCGTTATGAAAA
TATGGGACTCAGCATGCAAGATGTTCTGTTCCTTGCTAATGATGATAATATTGGTCATTT
CTATGATTCTACTCTTGAGCATGGTGCTGACGCAAAGCTGGCTGCCAACTGGATCATGGG
TGACATTGCTGCTTATCTCAAAGATGAAAAGGTCTCCATTGATGAAATTAAATTAACACC
TCTAGAGCTTTCTGAACTGATAGCATCCATTAAGAATGGAACAATAAGTGGGAAGATCGG
CAAGGAGATACTGGCCGAGCTCATTGCCAAAGGTGGAACAGTTAAGGGTGTGATAGAAGA
GAAAGATTTGGTTCAGATAGCAGATCCAGCAGCAATCGAGGCAATGGTGGATAAAGTAAT
TGCTGATAATCCAAAGCAACTTGAGCAGTACCGTGCTGGAAAAACTAAGCTACAAGGATT
TTTTGCTGGCCAGGTGATGAAAGCATCGAAGGGCAAGGCCAACCCAGTTTTGTTGAATAA
AATCCTTGGAGAGAAGTTGAATGCCAATTAGTTATTTTTGCCATCATACTGAAAATCTCA
AGGAGTGCACGAAGAATGCAACTGCAAACGAAGTCCCTGAACCAGCAACCGTTGAGTTGA
GAATGTGATTAATGTGAATGATGTAGAAGTTTTGTTCACAATACGGATATCATTGTACTT
AGGTGATACATTGAAATGGCATGTTGATTATAATTTATGCAGTAGCTTACCCCA