Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES09641
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:17179472:17188617:-1 gene:SORBI_3005G101400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGGGCGCCAGCCACATGCTCCTGGAGGAGCCCGTCCGCCTCGCCTCCGTCCTCTCC
CCGGCCAAGCCCAAAGTATTCCCATCCCTCACCAAGATTGTTGGCACGCTCGGGCCCAAG
TCACACTCGGTTGAGGTTATTCAGGAATGTCTCACTGCTGGAATGTCAGTTGCACGGTTT
GATTTCTCAGGGATGGATGCTGCATATCACCAGGAGACCCTTGACAATCTGAGGAAAGCA
GCACAGAATGCGAAGAAGTTGTGCCCGGTAATGCTGGATACTCTGGGTCCAGAAATTCAG
GTTCAAAATTCCACTGGTGAGCCAATTGAGTTGAAAGCTGGGAATCATGTTATCATAACT
CCAGATATTTCTAAAGCTCCCTCTGCTGAGATCCTACCAATTAAATTTGGTGATCTTGCA
AAAGTTGTGAAGAAGGGTGATACTCTTTTTATGGGCCAATATCTCTTCACAGGAAGTGAA
ACAACTTCTGTGTGGCTAGAAGTTGTGGAGACTTCTGGGGAAAATGTAAATTGTCTAGTG
AAGAATGCAGCTACGCTTGCTGGCCCCATTTTCACTTTGCATGTTTCACAAGTTCACATC
AGTTTGCCTACTTTGAGTGAATATGATAAACATGTCATTTCAACTTGGGGTTCATGTAAC
AGCGTTGATATTATATCACTTTCCCATACCCGCTGTGCTGAAGATGTCAGGGAGCTCAGA
GCCTTTTTACAATCACATGCCCTTCCTGACACACAAATATATGCGAAGATTGAAAATTCT
GAGGGTTTGGATCATTTTGATGACATTCTCAAAGAGGCGGATGGCATCATTATTTCTCGA
GGAGACCTGGGAATTGACCTTCCTCCAGAAAACGTTTTCATGTTCCAAAAGAAAGCTATT
CATAAATGCAATCTGGAGGGTAAACCTGTGATCATCACTCGAGTTGTGGACAGCATGATT
GACAATCTACGCCCTACCCGTGCAGAGGCAACTGATGTTGCAAATGCTGTCCTAGATGGC
ACTGATGGCATTTTGCTTGGTGCGGAGACATTTCGAGGGCTTTATCCTGTTGATGCAGTG
AGTACTGTGGGGAGAATATGCGCAGAAGCTGAGACTGTGTATAATCAGCCACTTCAATTC
AAGAAAGTAATGTGGCATGTAGGTGACCCAATGCCCCATGAGGAATCTGTGGCATCAGCA
GCGGTTGGTTCTGCAATCAAGGTAAAAGCTGCTGCAATTGTTGTGTTCACATTCTCAGGG
AGAGCTGCGAGGTTAATTTCTAAGTACAGGCCAACAATGCCAGTTTTAGCAGTTATCTTC
CCACGTGAAGGATCTGATCCATCAAAGTGGCGTTCTTATGGCACAACACAGGCAAGGCAA
TGTTTCGCAGTGAGAGGCGTGTACCCTTTGATGGGGAGTACAGATGAGGCTGAAACTGGT
GGACTAACAAAGGAAGAGTATGGGATAAAACTTGCGGTGAGCTATGGTCGGTCAGTTGGC
ATAGTGAAGCCTTTCGACAGGTTGATAATCTTTGAAAAGATTGGTGATTCTTCTGTTGTC
AAGATCATCGAGTGTGAAGGTTAA

Peptide Sequence

PEP ID

EES09641
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:17179472:17188617:-1 gene:SORBI_3005G101400 transcript:EES09641 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQGASHMLLEEPVRLASVLSPAKPKVFPSLTKIVGTLGPKSHSVEVIQECLTAGMSVARF
DFSGMDAAYHQETLDNLRKAAQNAKKLCPVMLDTLGPEIQVQNSTGEPIELKAGNHVIIT
PDISKAPSAEILPIKFGDLAKVVKKGDTLFMGQYLFTGSETTSVWLEVVETSGENVNCLV
KNAATLAGPIFTLHVSQVHISLPTLSEYDKHVISTWGSCNSVDIISLSHTRCAEDVRELR
AFLQSHALPDTQIYAKIENSEGLDHFDDILKEADGIIISRGDLGIDLPPENVFMFQKKAI
HKCNLEGKPVIITRVVDSMIDNLRPTRAEATDVANAVLDGTDGILLGAETFRGLYPVDAV
STVGRICAEAETVYNQPLQFKKVMWHVGDPMPHEESVASAAVGSAIKVKAAAIVVFTFSG
RAARLISKYRPTMPVLAVIFPREGSDPSKWRSYGTTQARQCFAVRGVYPLMGSTDEAETG
GLTKEEYGIKLAVSYGRSVGIVKPFDRLIIFEKIGDSSVVKIIECEG

Transcript Sequence

Transcript ID

EES09641
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:17179472:17188617:-1 gene:SORBI_3005G101400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTCCCTTCTTTCTTTCTTTCTCTCCACGACTCGCCCGCTCCTCTCTCTCTCTCCTTTCTC
TGATTCTCTCCCGTCCTCGTCATCGTCTTGCTGCTCGAGCCGCGAGGCGATCGCATCGGA
GACTCGGAGCCGGCAAAAACCCTAAGGGGAAGAAGGTTTCTGCAAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGGAGATGCAGGGCGCCAGCCACATGCTCCTGGAGGAGCCCGTCCGCC
TCGCCTCCGTCCTCTCCCCGGCCAAGCCCAAAGTATTCCCATCCCTCACCAAGATTGTTG
GCACGCTCGGGCCCAAGTCACACTCGGTTGAGGTTATTCAGGAATGTCTCACTGCTGGAA
TGTCAGTTGCACGGTTTGATTTCTCAGGGATGGATGCTGCATATCACCAGGAGACCCTTG
ACAATCTGAGGAAAGCAGCACAGAATGCGAAGAAGTTGTGCCCGGTAATGCTGGATACTC
TGGGTCCAGAAATTCAGGTTCAAAATTCCACTGGTGAGCCAATTGAGTTGAAAGCTGGGA
ATCATGTTATCATAACTCCAGATATTTCTAAAGCTCCCTCTGCTGAGATCCTACCAATTA
AATTTGGTGATCTTGCAAAAGTTGTGAAGAAGGGTGATACTCTTTTTATGGGCCAATATC
TCTTCACAGGAAGTGAAACAACTTCTGTGTGGCTAGAAGTTGTGGAGACTTCTGGGGAAA
ATGTAAATTGTCTAGTGAAGAATGCAGCTACGCTTGCTGGCCCCATTTTCACTTTGCATG
TTTCACAAGTTCACATCAGTTTGCCTACTTTGAGTGAATATGATAAACATGTCATTTCAA
CTTGGGGTTCATGTAACAGCGTTGATATTATATCACTTTCCCATACCCGCTGTGCTGAAG
ATGTCAGGGAGCTCAGAGCCTTTTTACAATCACATGCCCTTCCTGACACACAAATATATG
CGAAGATTGAAAATTCTGAGGGTTTGGATCATTTTGATGACATTCTCAAAGAGGCGGATG
GCATCATTATTTCTCGAGGAGACCTGGGAATTGACCTTCCTCCAGAAAACGTTTTCATGT
TCCAAAAGAAAGCTATTCATAAATGCAATCTGGAGGGTAAACCTGTGATCATCACTCGAG
TTGTGGACAGCATGATTGACAATCTACGCCCTACCCGTGCAGAGGCAACTGATGTTGCAA
ATGCTGTCCTAGATGGCACTGATGGCATTTTGCTTGGTGCGGAGACATTTCGAGGGCTTT
ATCCTGTTGATGCAGTGAGTACTGTGGGGAGAATATGCGCAGAAGCTGAGACTGTGTATA
ATCAGCCACTTCAATTCAAGAAAGTAATGTGGCATGTAGGTGACCCAATGCCCCATGAGG
AATCTGTGGCATCAGCAGCGGTTGGTTCTGCAATCAAGGTAAAAGCTGCTGCAATTGTTG
TGTTCACATTCTCAGGGAGAGCTGCGAGGTTAATTTCTAAGTACAGGCCAACAATGCCAG
TTTTAGCAGTTATCTTCCCACGTGAAGGATCTGATCCATCAAAGTGGCGTTCTTATGGCA
CAACACAGGCAAGGCAATGTTTCGCAGTGAGAGGCGTGTACCCTTTGATGGGGAGTACAG
ATGAGGCTGAAACTGGTGGACTAACAAAGGAAGAGTATGGGATAAAACTTGCGGTGAGCT
ATGGTCGGTCAGTTGGCATAGTGAAGCCTTTCGACAGGTTGATAATCTTTGAAAAGATTG
GTGATTCTTCTGTTGTCAAGATCATCGAGTGTGAAGGTTAAGCATTAGATACCTACAACC
CATGCTATAGTTTCATGTATGGCATGGGATTTCAGATACCTCCAGTTTTCTCAATTATTT
AACCAATGATAACTAGATAGTACAGAATGCACCAGATATCTTGTTAGGCGATATTGCCTC
CTTTTTCCTTCAGATTTTGTATCTTTAGATGCAATAATCCATGATGTCACAGATTTATAC
TGGAACTATGATTTGATAGCAAATATAGGATTGTTGGCACCATACCTTATTGTATTTGAC
ATCACATGACGCACTGCATAACATCCGAAAAGACAATCTTAGGACATTAACCTATACTGT
TGTCTATGGTACACTCCTGCAACTGCGATCAGTACTGCTCCTTGAAGTACACAGCATAGA
TGATGCTGCAGATTGAGATGATGATGATGACGATATCAAAGGTGAGCGCAGTCATGGCCT
GGTCGCTGAGCTCCATGTTCTTGCCACCGAGGCGGTCAACCATGTCCGGCACGGACTTGT
AGTTGATGATGTCCTGCTCGTAGGGGTCTTCGAGCCTGGACCTGAGCTGCTGCAGGCGGC
GGCTCTCGGCCTCCTGTGCCAGCGTCCAGTCGTAGAAGCGCCGCGTCTCCTCCTTGCTCA
GCACGTTGTACACCTCCCGCAGGCGGATGAACTTCTGCGACGCCACCTTGAGCGGCAGCG
TCGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGC