Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES09541
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:11558594:11563138:-1 gene:SORBI_3005G084800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAAGTGGACAGAAGGAAGAATTTGCAGATTGGATCCAAGGGGAAGGAGGAGGTTCAG
AGCAAGAATCAGAGGCGGGAGGAGCCGCTGGCATCGTCGGAGGTGGACATGGATGAGCCA
GAGGCTGCCGAGAGCGGCGACATGGTTGTTGATGGCAACAATGGCAGCTCCAAAGAGAGC
CCCGTGCCACCCATGGATTCCAAGAACTCCAAGGGCTGTGCGGCCAAGAAGCGGAGATCC
GTGAGCGCCGACTTTGGGGCGGAGCTGGACTTGGACCTTGGCAATGGGGAGGAGAGTGGG
GCACAGCAGGAGGAGAGGAAGCTCTCTAGGCAGGACCGGGTTGAGCTTTGCAGGTCGTTC
CAGCACGCAGTCAGCTCCCATGATTGGGAGAGCGCAGAGGGGCTGGTAGGAATGGCCGAT
GCACAAGGGCTCAACGATGTGCTCTGCGTGGCTGTGGATGCGATTTGGTTCTTGAGTGAC
AAGGACGAGCTCCTTGCTATTGTGGGGTTGATCAGGAGGATTGTGTCTGAGGGCGCAAAG
GATTTTACCCGTGCTGCGCTCCGGACATCATTCCTCGCATCGTGCGTATCAGCATGTAGG
GGACGGTCGACTAGCCTTGCTGATGCAGTGAGCTTCATGGGTCAGAAATTGCATGAACGA
CTCCAAGAATCCCAAGGTGATGAGGTATTGAAAGCAGAAGCAAGTGCAAAGGTGCACAGG
TTTACAGAATGGGCTCTAAAGTGTATCGGGCTGCATTCGCGTGTTCGAGAGAATAGGGGC
AAAGGAAACCATGACACTGTCATCGAGGTTCAACTTCAGTTGTCTGCTTTCAAGACATTT
CTTGATCTTGCTGATAATGAGCTTACTGGGAAGGATTTTACGGAGGCTTTTGATGCTGCA
TGCTTCCCTCTTACACTCTTTTCAACCACCTTCGACCAAGGATGGGCGTCAGGAATATCA
GCAGCTGCAGTACAAGGGCTTTTAGAGTTGTTGGTAGAGGGTGGTGCAGACAATGTAAAC
CAATGCTTTCTTGAAGCTGCACGCTATGGCAGCACTGAGCTTGTCCGGATCTTACTTCAG
ATTGCTCAAAGGAACAGCTTGGACATTGATGTGGATCTAGCCCTTGGCTTTGCTGCTCAC
TATGGGAAGATAGAAACCATGGGATGCTTGGTTGAAGAAGGTAATGCTGTTGGCTTTCTT
GGCCCTTTGATGCGTGCTGCTGAACGTGGATGCCTCCAAGTTGTGGAATGGTTTGTCAAC
CACGGGTGTCGAGAAATGGAGCTTTGTCTAGCTCTTACTGCTGCCACCTCTAGTAGCCAG
ATTGCAGTTGCTGCTTATCTTCTTCCTCTTGTCCCGCAACATGTTCTTGCCCCCCTCAGC
ATCGAGATTATCAAGGCTGCTGGTGAGAGGAGTACAGGTTCCCTGCATGGTGTCGATTTT
CTTCTCCGTTCAGATTTCCTCAATGACCCAGCTGCCACATATGCTGTGGCAGACAGTATT
GCAAGATGTACCGATGAAGCTGTGGATGCAAAGCTTAGGTCTTTCATGAATGAGCATTGG
AGCGAGGCAGCTTTTTCTGCAGGATTTGAATCTGCACAACAGCACTTTGTTAATTTCATG
AGGATAATGGAAAGGGGGGAATCACCAATCCGCCTAGGGGACCTACCTCTTGAGCTGGTA
ATTGCCATGGCCTACCTGCCACTCTATAAGGAATGTATGAATTCCATTGGGCGACTTTTG
CCTCAAAGGCTTAGAGGTCAGCTTGTGGAGGCTGCAAGCAGGCTCGAGGATCGGCAAGTG
GAAAGGGATAGCCAAAGCAGAGAACTCTTGGCCATCTTGGAGCACCACATCCCACGATTC
ATGACCCAAACTTGA

Peptide Sequence

PEP ID

EES09541
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:11558594:11563138:-1 gene:SORBI_3005G084800 transcript:EES09541 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEVDRRKNLQIGSKGKEEVQSKNQRREEPLASSEVDMDEPEAAESGDMVVDGNNGSSKES
PVPPMDSKNSKGCAAKKRRSVSADFGAELDLDLGNGEESGAQQEERKLSRQDRVELCRSF
QHAVSSHDWESAEGLVGMADAQGLNDVLCVAVDAIWFLSDKDELLAIVGLIRRIVSEGAK
DFTRAALRTSFLASCVSACRGRSTSLADAVSFMGQKLHERLQESQGDEVLKAEASAKVHR
FTEWALKCIGLHSRVRENRGKGNHDTVIEVQLQLSAFKTFLDLADNELTGKDFTEAFDAA
CFPLTLFSTTFDQGWASGISAAAVQGLLELLVEGGADNVNQCFLEAARYGSTELVRILLQ
IAQRNSLDIDVDLALGFAAHYGKIETMGCLVEEGNAVGFLGPLMRAAERGCLQVVEWFVN
HGCREMELCLALTAATSSSQIAVAAYLLPLVPQHVLAPLSIEIIKAAGERSTGSLHGVDF
LLRSDFLNDPAATYAVADSIARCTDEAVDAKLRSFMNEHWSEAAFSAGFESAQQHFVNFM
RIMERGESPIRLGDLPLELVIAMAYLPLYKECMNSIGRLLPQRLRGQLVEAASRLEDRQV
ERDSQSRELLAILEHHIPRFMTQT

Transcript Sequence

Transcript ID

EES09541
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:11558594:11563138:-1 gene:SORBI_3005G084800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGAGCGCGCGCGCGAGCGAGAGTGGTGGGTGGTGTGTGCGCGAGGCCGCGAGCGCAACAG
AGAGGGAGAGGGGAGAGAGAGTGAGCGTATTTCTTCTTCCTCCTCCCCGTCAAGGAGAGA
GAGAGGGCAGCTCCGGAGCCGCACGGGCGCGGGCGAGGCAGGCAGGCAGGCAGTGGCTCC
TCCTCCCCCTGCTTTCGAAATCAGCTCATCAATTCGACCTATCACACAGCTATCATCATC
GTCATCATCCCCTACCACTCCTCTTTCTCTCCTATGCTGCTCTAATTCATTGGGGAAAAA
GAAAACAAAAAAAAAAAGAGTCCTTGTATCGATTTCTGGTATGGTTACGAATCCGCGCGC
CTTGTTTTGGATTTCGGTTCTTCCCCTTTTGGTTGCCCGTCAGGCGGCCGATTCCTGCCG
CTCCTAATTCGTTTGATTTCGATCTGTTCTTGCAGGTGGCGACTGTTGCTGGGGTTTCCT
TGTCTGGTTCTTGATTTGCGCCAGGACGGATTTGCCGTCCACTCGGGTTCCGCCGTGCGG
TGTGGTGCTGAATCCTCCTCTGTTCCCTTATTAGGTGGGTTCGATCTGTTTCGTGCCTCA
TTTATTGGCTCCGGTTCCTCGATCCATTTATGTGACTTTTTGAAGAAATTTTTCTCAGGT
TTGGATCGGGGGTAGGGATGGAAGTGGACAGAAGGAAGAATTTGCAGATTGGATCCAAGG
GGAAGGAGGAGGTTCAGAGCAAGAATCAGAGGCGGGAGGAGCCGCTGGCATCGTCGGAGG
TGGACATGGATGAGCCAGAGGCTGCCGAGAGCGGCGACATGGTTGTTGATGGCAACAATG
GCAGCTCCAAAGAGAGCCCCGTGCCACCCATGGATTCCAAGAACTCCAAGGGCTGTGCGG
CCAAGAAGCGGAGATCCGTGAGCGCCGACTTTGGGGCGGAGCTGGACTTGGACCTTGGCA
ATGGGGAGGAGAGTGGGGCACAGCAGGAGGAGAGGAAGCTCTCTAGGCAGGACCGGGTTG
AGCTTTGCAGGTCGTTCCAGCACGCAGTCAGCTCCCATGATTGGGAGAGCGCAGAGGGGC
TGGTAGGAATGGCCGATGCACAAGGGCTCAACGATGTGCTCTGCGTGGCTGTGGATGCGA
TTTGGTTCTTGAGTGACAAGGACGAGCTCCTTGCTATTGTGGGGTTGATCAGGAGGATTG
TGTCTGAGGGCGCAAAGGATTTTACCCGTGCTGCGCTCCGGACATCATTCCTCGCATCGT
GCGTATCAGCATGTAGGGGACGGTCGACTAGCCTTGCTGATGCAGTGAGCTTCATGGGTC
AGAAATTGCATGAACGACTCCAAGAATCCCAAGGTGATGAGGTATTGAAAGCAGAAGCAA
GTGCAAAGGTGCACAGGTTTACAGAATGGGCTCTAAAGTGTATCGGGCTGCATTCGCGTG
TTCGAGAGAATAGGGGCAAAGGAAACCATGACACTGTCATCGAGGTTCAACTTCAGTTGT
CTGCTTTCAAGACATTTCTTGATCTTGCTGATAATGAGCTTACTGGGAAGGATTTTACGG
AGGCTTTTGATGCTGCATGCTTCCCTCTTACACTCTTTTCAACCACCTTCGACCAAGGAT
GGGCGTCAGGAATATCAGCAGCTGCAGTACAAGGGCTTTTAGAGTTGTTGGTAGAGGGTG
GTGCAGACAATGTAAACCAATGCTTTCTTGAAGCTGCACGCTATGGCAGCACTGAGCTTG
TCCGGATCTTACTTCAGATTGCTCAAAGGAACAGCTTGGACATTGATGTGGATCTAGCCC
TTGGCTTTGCTGCTCACTATGGGAAGATAGAAACCATGGGATGCTTGGTTGAAGAAGGTA
ATGCTGTTGGCTTTCTTGGCCCTTTGATGCGTGCTGCTGAACGTGGATGCCTCCAAGTTG
TGGAATGGTTTGTCAACCACGGGTGTCGAGAAATGGAGCTTTGTCTAGCTCTTACTGCTG
CCACCTCTAGTAGCCAGATTGCAGTTGCTGCTTATCTTCTTCCTCTTGTCCCGCAACATG
TTCTTGCCCCCCTCAGCATCGAGATTATCAAGGCTGCTGGTGAGAGGAGTACAGGTTCCC
TGCATGGTGTCGATTTTCTTCTCCGTTCAGATTTCCTCAATGACCCAGCTGCCACATATG
CTGTGGCAGACAGTATTGCAAGATGTACCGATGAAGCTGTGGATGCAAAGCTTAGGTCTT
TCATGAATGAGCATTGGAGCGAGGCAGCTTTTTCTGCAGGATTTGAATCTGCACAACAGC
ACTTTGTTAATTTCATGAGGATAATGGAAAGGGGGGAATCACCAATCCGCCTAGGGGACC
TACCTCTTGAGCTGGTAATTGCCATGGCCTACCTGCCACTCTATAAGGAATGTATGAATT
CCATTGGGCGACTTTTGCCTCAAAGGCTTAGAGGTCAGCTTGTGGAGGCTGCAAGCAGGC
TCGAGGATCGGCAAGTGGAAAGGGATAGCCAAAGCAGAGAACTCTTGGCCATCTTGGAGC
ACCACATCCCACGATTCATGACCCAAACTTGAAGGTAGGCAGGCATCCTCTCTGAACCAC
TGCTGTCAATGCAAGCAAAAAGCAACTTAGAAGGGCAATGCACCGTCTTCAGTGCCGCCA
CCATGTCCCTGCTTGGGGACATCCCCAAAACGATAGCATCTTGAGTTGGCTCTCCTGGAG
GCGATGATCTTCGGAGAGTATATAATTTTGGGGAATGGTGTGTGTGTGTGGCCTTGTCGA
GGCATGTGTCGGAGTGTTTTACTGGGATCATAATCTTCCATGAAAAATGATATAAGCCTT
CAGCATGTAATCTGAGTTTTCGGTGTAATTCAACACTAGTCTTGTGACAACATGTCGCTA
GCTATGGCTAGTGACTTTTTTGATCATGGACTGGCCATCTGTCCTGGCTTCATAAACATA
AACGAAGAGACAGAGTATATTCATAC