Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES09371
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:5708500:5713071:-1 gene:SORBI_3005G056400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCATCTGCTACTCTCCTCAAGTCATCTTTCCTTCCCAAGAAGGCTGAATGGGGTGCC
ATGCGCCAGGCTGCCACTCCCAAGCCGGTGACTGTCTCCATGGTTGTCCGTGCTAGCGCC
TATGCTGATGAGCTTGTCCAAACCGCGAAAACCATCGCGTCACCAGGAAGGGGTATCCTT
GCCATGGATGAGTCGAACGCTACCTGCGGCAAGAGGCTTGACTCCATTGGCCTTGAGAAC
ACTGAGGCCAACCGCCAGGCTTACAGGACCCTCCTTGTCAGTGCCCCAGGCCTAGGACAG
TACATCTCTGGTGCTATCCTCTTCGAGGAGACCCTCTACCAGTCAACTGTTGATGGAAAG
AAGATTGTTGACGTCCTTAATGAGCAGGGAATCGTGCCTGGTATCAAGGTCGACAAGGGT
CTTGTGCCACTTGCTGGCTCCAACAACGAGTCGTGGTGCCAAGGTCTTGATGGCCTTGCT
TCACGTGAAGCAGCCTACTACCAGGCTGGTGCCCGCTTCGCCAAGTGGCGCACTGTTGTC
AGCATCCCCAACGGTCCATCTGAACTTGCCGTGAAGGAAGCTGCCTGGGGCCTTGCCCGC
TATGCCGCCATTTCACAGGAAAATGGTCTGGTGCCAATTGTGGAGCCCGAAATCCTTCTT
GATGGTGAGCATGGCATCGAGAGGACCTTCGAGGTCGCACAGAAGGTGTGGGCAGAGACC
TTCTACTACATGGCTGAGAACAATGTGATGTTTGAGGGCATCTTGCTCAAGCCCAGCATG
GTTACCCCTGGTGCTGAGTGCGAGGAGAAGGCCACTCCTGAGCAAGTAGCCGAGTACACC
CTCAAGCTCCTCCACAGAAGGATCCCTCCTGCCGTTCCCGGCATCATGTTCCTGTCTGGT
GGGCAGTCTGAGGTTGAGGCGACCCAGAACCTGAACGCCATGAACCAGAGCCCCAACCCG
TGGCATGTGTCATTCTCCTACGCTAGGGCGCTGCAGAACACCTGCCTCAAGACATGGGGA
GGCAGGCCTGAGAACGTGAAGGCAGCACAGGACGCGCTGCTGCTGCGCGCCAAGGCCAAT
TCCCTGGCACAGCTCGGCAAGTACACCGGCGATGGTGAGGCCGCTGCCGCCAAGGAGGGC
ATGTTCGTCAAGAACTACAGCTACTAA

Peptide Sequence

PEP ID

EES09371
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:5708500:5713071:-1 gene:SORBI_3005G056400 transcript:EES09371 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASATLLKSSFLPKKAEWGAMRQAATPKPVTVSMVVRASAYADELVQTAKTIASPGRGIL
AMDESNATCGKRLDSIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTVDGK
KIVDVLNEQGIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQAGARFAKWRTVV
SIPNGPSELAVKEAAWGLARYAAISQENGLVPIVEPEILLDGEHGIERTFEVAQKVWAET
FYYMAENNVMFEGILLKPSMVTPGAECEEKATPEQVAEYTLKLLHRRIPPAVPGIMFLSG
GQSEVEATQNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLLRAKAN
SLAQLGKYTGDGEAAAAKEGMFVKNYSY

Transcript Sequence

Transcript ID

EES09371
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:5708500:5713071:-1 gene:SORBI_3005G056400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGGCCCAAGAAGCAGCACCATTAATTCTGCCTTTGGGAGCTAGGACTAGAAGTGTCACAG
AAGGAACCCTGCAGCATCCAGCAAACAACTCAGAGCTGGAGTTTGTTACCACCAAAATAC
TGACTGGAAAAATATAATGTATTTTATGGAATAAATGAAAACTGGGCAATTTTGACGGAT
GCAATCTCTCAGGACATTTCTGCCGTTGGTAGACACGAATGGGCAACAGTTGGTGGTGAA
ATCCACCCACAGAAACCCAGATTTCCTCATCAGGCAGGATCCATGTTAAGGTCAAGAATG
CACATCCCATATTTTTCACATCCGATATTTTTTGACCACGACGTTATCGCGCAAAGAGGA
AAATGTTTCTTTTGCAAGTTTGACATGGTATATACACAAAAAAGAAAAGAGAAGGGAAAA
ATATATATGTGCCAGAGACAGGACAAAAGAGAGGGTGGCAAGAGGATTGGCTGATTGCAG
CAACCAAAGCATAGCCATTCATTTCCAGAAGGCCAGTCTCCACCACACAGCTCATATCCC
TTGTCCTTGTGTGCCCTCAGGTGCACCACCTTATTATATGCCAGCTGCTGCACCACTTCT
CAAGTCTCAACGACTGTGTCATCAAAGAGAGGGTAGCACCTGATCTCATCTTTCACCTTC
AGAACCAGAGCAATGGCATCTGCTACTCTCCTCAAGTCATCTTTCCTTCCCAAGAAGGCT
GAATGGGGTGCCATGCGCCAGGCTGCCACTCCCAAGCCGGTGACTGTCTCCATGGTTGTC
CGTGCTAGCGCCTATGCTGATGAGCTTGTCCAAACCGCGAAAACCATCGCGTCACCAGGA
AGGGGTATCCTTGCCATGGATGAGTCGAACGCTACCTGCGGCAAGAGGCTTGACTCCATT
GGCCTTGAGAACACTGAGGCCAACCGCCAGGCTTACAGGACCCTCCTTGTCAGTGCCCCA
GGCCTAGGACAGTACATCTCTGGTGCTATCCTCTTCGAGGAGACCCTCTACCAGTCAACT
GTTGATGGAAAGAAGATTGTTGACGTCCTTAATGAGCAGGGAATCGTGCCTGGTATCAAG
GTCGACAAGGGTCTTGTGCCACTTGCTGGCTCCAACAACGAGTCGTGGTGCCAAGGTCTT
GATGGCCTTGCTTCACGTGAAGCAGCCTACTACCAGGCTGGTGCCCGCTTCGCCAAGTGG
CGCACTGTTGTCAGCATCCCCAACGGTCCATCTGAACTTGCCGTGAAGGAAGCTGCCTGG
GGCCTTGCCCGCTATGCCGCCATTTCACAGGAAAATGGTCTGGTGCCAATTGTGGAGCCC
GAAATCCTTCTTGATGGTGAGCATGGCATCGAGAGGACCTTCGAGGTCGCACAGAAGGTG
TGGGCAGAGACCTTCTACTACATGGCTGAGAACAATGTGATGTTTGAGGGCATCTTGCTC
AAGCCCAGCATGGTTACCCCTGGTGCTGAGTGCGAGGAGAAGGCCACTCCTGAGCAAGTA
GCCGAGTACACCCTCAAGCTCCTCCACAGAAGGATCCCTCCTGCCGTTCCCGGCATCATG
TTCCTGTCTGGTGGGCAGTCTGAGGTTGAGGCGACCCAGAACCTGAACGCCATGAACCAG
AGCCCCAACCCGTGGCATGTGTCATTCTCCTACGCTAGGGCGCTGCAGAACACCTGCCTC
AAGACATGGGGAGGCAGGCCTGAGAACGTGAAGGCAGCACAGGACGCGCTGCTGCTGCGC
GCCAAGGCCAATTCCCTGGCACAGCTCGGCAAGTACACCGGCGATGGTGAGGCCGCTGCC
GCCAAGGAGGGCATGTTCGTCAAGAACTACAGCTACTAAGACGATGATACCACTGCTGCT
AGTACGTTCCTCGGGGGCACTGTAGGCAGTCTGCCATTACAGGTTCAGCTGGAAAAGTAC
ACTGCAATTTCACTACTACCTTGAGGCCTGATTACATTTCATTTGGAGGAATTGGAATCT
ACTTAGTGGACTAGGCTATTTGGCTTGGAATTTGACATTCCACAACTTTCAAAGTTGACA
TATAAGCCTATCTCAAATTCATAGGGTCGAAGATATAAATTGATTCTATATAGATCACAG
AAACTTGTAGCATGCTCTTCGGCTCGCTCCCCTACTATAGAATGCAGCACATAGGTATCT
GTATCTCCCCCCTATGGCCAACGGTCGTATACAATAGGGAAATCACTTTCGTGGCACTTT
GTTTCTTTCGCTGTGTCTTGTAAACATTTTGTCACTATTCAGTTTTCGTTATTGAGTAGT
GAAATCACTTTCATGGCACTTTGTTTCTTTCGCTGTCATGGAGATCAATTGGTGCCATGT
GTGGCCAATTTGCTCTTGTAAACATTTTGTCACTGTTCAGCTCTTGTTAGTCAATAGTGA
AATGAGTTTCATAGCACTTTGTTTCTTTCGTTGTCATGGAGATCAGTAGGTGCCATTTGG
CCAAATTGCTCGCTGGTGTCAGATAGCTCGTTTTTTTGTTGTTGCAATTGTTATAATTTC
TTTTCTCCCATTTACTGAACGCAAACAACTTTTATTATTCAAAATATGATATTTGCATTT
TCTTTCTCTATTATCTTCTAGCTGGTTCATTTATTAATTTTTATGGTATGGCATTAGACA
ATGTCAGTTCTCTTTTGCAAGGCCATGAGAAAAAAAAAATTCCTTGGAAATCATCACGTA
CATATTGTAATCAAAATTGATCTTCCAGAATGCTATACTGAATCCTTATGTTGGCATCTT
GGTTGGGAGGTTTCAAAATGAGTGGTGGTGATTGTCCCATTGTGCAGCTAGGCCCATGAA
GCAGCACCGTTAATTCTGCCTTTGGATGCTAGGACCAGAAGTGTGTCACAGTCTCACAGA
AGGAACCCTGCAGCATCCAGCAAACAACTAAGAGCTGGAGTTTGTTACCACCAAAATACT
GACTGGAAAAGAAATATAATGTACTGTATTTCATGGAATAACAGACAACTGCGCAATTTC
ACTGGATGCAGTCTATCAGGACACAGACACGAATGGGCAACTGTTGGTGGTGAAATCCGG
CCACAGAAACGCAGAATTGCTCATCAGGCAGGATCCATCTTGAGGTCAAGAATGCACATC
CAATATCTACGGTTCACGTCGTTGTCGCGCAAAGAGGAAACTGTTTGTTTTGCAAGTTTT
ACACGGTACACTGTACACAGAAGAAGAGAAAGGAAATATCTGCCAGGGACAGAACAAAAG
AGAGGGTGACAAGAGGATTGGCTGATTGCAGCTACCAAAAGCACAGCCGTTCATTTCCAG
AAGGCCAGTCTCCACCTCACAACTCATATCCCTTGACCAAACCGCGGTATTGTTTCTCTA
CACCAGCAGTAAAATTATGCGCTTATATTACCATGCAGATTATTGTGTATGCTTTATTAG
G