Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES09180
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:1915480:1920800:-1 gene:SORBI_3005G020700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATGAGCAAAGTAGCGGCGGCGGTGAGGCGGCGGCGAAGGTGCCACTGCTGGAGCCA
CGGGCGGCGGCGGCGGCGGAGGAGGAGGAGCACCACCACCACCACAACGGGGCAGGAGGA
GGAGGAGGAGGGGCGGCGGCGGCGGTGGTCGTGGGCAAGTCGGACGAGGCGGAGTGGTCG
GCGCAGCCGCTGCGGCGGCGGGCGTGGGAGGAGAACAAGCGGCTGTGGGTGGTGGCGGGG
CCGTCCATCTGCGCGCGCTTCGCGTCGTTCGGCGTCACCGTCATCAGCCAGGCCTTCATC
GGCCACATCGGCGCCACCGAGCTCGCCGCCTACGCCCTCGTCTCCACCGTCCTCATGAGG
TTCAGCAACGGCGTCCTCCTGGGGATGGCGAGCGCACTGGAGACGCTATGTGGGCAATCC
TACGGCGCGAAGCAGTACCACATGCTGGGCATCTACCTACAGCGGTCCTGGATCATCCTC
TTCGCGTGCTCCGTCGTGCTGCTCCCGATCTACCTCTTCACGGCGCCGCTGCTGGTCGCG
CTGGGCCAGGACCCGGAGATCGCCGTGGTGGCGGGCACCATCTCGCTCTGGTACATCCCC
GTCATGTTCTCCTACGTCTGGGCCTTCACGCTCCAGATGTACCTGCAGGCGCAGAGCAAG
AACATCATCATCACCTACCTGGCATTGCTCAACCTCGGCCTCCACCTCCTCCTGTCATGG
CTCATGACTGTCAAGTTCCAGCTCGGCGTGGCGGGGGTCATGGGGTCGATGGTCATCGCC
ATGTGGATCCCCGTGTTTGGGCAGCTTGCCTTCGTCTTCTTTGGTGGATGCCCTCACACG
TGGACTGGGTTCTCCTCGGCTGCGTTTGCTGATCTCGGTGCCATCGTCAAGCTCTCGCTA
TCTTCTGGTGTCATGCTCTGTTTGGAATTGTGGTACAACACCATATTGGTGCTGCTCACA
GGGTACATGAAGAATGCAGAGGTTGCACTCGACGCCCTTTCAATATGCCTTAATATCAAC
GGTTGGGAGATGATGATTTCCTTCGGCTTTTTGGCTGCAACAGGAGTGCGAGTGGCAAAT
GAGCTTGGAGCTGGAAGCGCAAGAAGGGCAAAGTTTGCCATTTACAATGTGGTCATCACA
TCTTTCTCGATCGGATTTGTGTTGTTCGTGCTCTTCCTTTTCTTCCGTGGAGGCCTTGCC
TACATATTTACCGACAGTCAAGCGGTAGCTGAGTCAGTTGCTGACCTCTCACCTCTGCTA
GCCTTCTCCATATTGCTAAACAGTGTTCAGCCAGTGCTATCAGGCGTCGCCGTCGGCGCA
GGCTGGCAAAGCGTAGTCGCCTATGTCAACGTCACTTCCTACTACCTGATTGGCATCCCT
CTTGGAGCAGTCCTGGGATATGTGGTGGGATTTGAAGTAAAGGGCATTTGGATTGGCATG
CTGCTCGGAACACTAGTCCAAACTATTGTGCTTCTCTTCATAACATTAAAGACCGACTGG
GAAAAACAGGTGGCGGTTGCTCAAGAGAGACTGAAGAGATGGTACATGCAAGAGAACAGA
AGACTTCAGGGGTTGAGTGGAAACTCTTGA

Peptide Sequence

PEP ID

EES09180
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:1915480:1920800:-1 gene:SORBI_3005G020700 transcript:EES09180 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDEQSSGGGEAAAKVPLLEPRAAAAAEEEEHHHHHNGAGGGGGGAAAAVVVGKSDEAEWS
AQPLRRRAWEENKRLWVVAGPSICARFASFGVTVISQAFIGHIGATELAAYALVSTVLMR
FSNGVLLGMASALETLCGQSYGAKQYHMLGIYLQRSWIILFACSVVLLPIYLFTAPLLVA
LGQDPEIAVVAGTISLWYIPVMFSYVWAFTLQMYLQAQSKNIIITYLALLNLGLHLLLSW
LMTVKFQLGVAGVMGSMVIAMWIPVFGQLAFVFFGGCPHTWTGFSSAAFADLGAIVKLSL
SSGVMLCLELWYNTILVLLTGYMKNAEVALDALSICLNINGWEMMISFGFLAATGVRVAN
ELGAGSARRAKFAIYNVVITSFSIGFVLFVLFLFFRGGLAYIFTDSQAVAESVADLSPLL
AFSILLNSVQPVLSGVAVGAGWQSVVAYVNVTSYYLIGIPLGAVLGYVVGFEVKGIWIGM
LLGTLVQTIVLLFITLKTDWEKQVAVAQERLKRWYMQENRRLQGLSGNS

Transcript Sequence

Transcript ID

EES09180
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:1915480:1920800:-1 gene:SORBI_3005G020700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCTCATCATCATGACCATCACGGCTAGCTAATCCTCTTCTTCTCAGATCTTATTAGAGC
TTGTCGCACGCGGCCGTGCCGCAGCCATCTCCTCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCGTCCACACAGGCCCCGGCGCCAGCGGTGACCGGCCGGTGAGTCGACGCGAGGGTACG
GTATGGATGAGCAAAGTAGCGGCGGCGGTGAGGCGGCGGCGAAGGTGCCACTGCTGGAGC
CACGGGCGGCGGCGGCGGCGGAGGAGGAGGAGCACCACCACCACCACAACGGGGCAGGAG
GAGGAGGAGGAGGGGCGGCGGCGGCGGTGGTCGTGGGCAAGTCGGACGAGGCGGAGTGGT
CGGCGCAGCCGCTGCGGCGGCGGGCGTGGGAGGAGAACAAGCGGCTGTGGGTGGTGGCGG
GGCCGTCCATCTGCGCGCGCTTCGCGTCGTTCGGCGTCACCGTCATCAGCCAGGCCTTCA
TCGGCCACATCGGCGCCACCGAGCTCGCCGCCTACGCCCTCGTCTCCACCGTCCTCATGA
GGTTCAGCAACGGCGTCCTCCTGGGGATGGCGAGCGCACTGGAGACGCTATGTGGGCAAT
CCTACGGCGCGAAGCAGTACCACATGCTGGGCATCTACCTACAGCGGTCCTGGATCATCC
TCTTCGCGTGCTCCGTCGTGCTGCTCCCGATCTACCTCTTCACGGCGCCGCTGCTGGTCG
CGCTGGGCCAGGACCCGGAGATCGCCGTGGTGGCGGGCACCATCTCGCTCTGGTACATCC
CCGTCATGTTCTCCTACGTCTGGGCCTTCACGCTCCAGATGTACCTGCAGGCGCAGAGCA
AGAACATCATCATCACCTACCTGGCATTGCTCAACCTCGGCCTCCACCTCCTCCTGTCAT
GGCTCATGACTGTCAAGTTCCAGCTCGGCGTGGCGGGGGTCATGGGGTCGATGGTCATCG
CCATGTGGATCCCCGTGTTTGGGCAGCTTGCCTTCGTCTTCTTTGGTGGATGCCCTCACA
CGTGGACTGGGTTCTCCTCGGCTGCGTTTGCTGATCTCGGTGCCATCGTCAAGCTCTCGC
TATCTTCTGGTGTCATGCTCTGTTTGGAATTGTGGTACAACACCATATTGGTGCTGCTCA
CAGGGTACATGAAGAATGCAGAGGTTGCACTCGACGCCCTTTCAATATGCCTTAATATCA
ACGGTTGGGAGATGATGATTTCCTTCGGCTTTTTGGCTGCAACAGGAGTGCGAGTGGCAA
ATGAGCTTGGAGCTGGAAGCGCAAGAAGGGCAAAGTTTGCCATTTACAATGTGGTCATCA
CATCTTTCTCGATCGGATTTGTGTTGTTCGTGCTCTTCCTTTTCTTCCGTGGAGGCCTTG
CCTACATATTTACCGACAGTCAAGCGGTAGCTGAGTCAGTTGCTGACCTCTCACCTCTGC
TAGCCTTCTCCATATTGCTAAACAGTGTTCAGCCAGTGCTATCAGGCGTCGCCGTCGGCG
CAGGCTGGCAAAGCGTAGTCGCCTATGTCAACGTCACTTCCTACTACCTGATTGGCATCC
CTCTTGGAGCAGTCCTGGGATATGTGGTGGGATTTGAAGTAAAGGGCATTTGGATTGGCA
TGCTGCTCGGAACACTAGTCCAAACTATTGTGCTTCTCTTCATAACATTAAAGACCGACT
GGGAAAAACAGGTGGCGGTTGCTCAAGAGAGACTGAAGAGATGGTACATGCAAGAGAACA
GAAGACTTCAGGGGTTGAGTGGAAACTCTTGAACCGCCCTCCCTCAGGCCTCAGCTCCAT
CTCTATCTCTGCAGGCTGTTATAAGTATCTACTCGGCATCCGAGACCCTTGGGGCAGACA
CACACGTATGACTAATTTTCCATTCACCGTCTCACAAGAACGAAATGAGGGAGCTGTTAG
TTAGTCTACCCAGGATTTTAATTGCTCCTCAAGCCGAGGCCAAGCAGCGGAAGTGGTTGT
CAGCAGCAGAGAAAAAGACACTCTATTGTTTGGCAGTGGCATGGCATGGAGGATGTGTGT
GCAACCTTGTTGGGTTTGTGCGAGTTTGGCTCAGGTTTGGTTTGGGCAGTATGGTAATGC
CCTCTTCATCAGAGCAGCGATTGTGGTGTGTTGGGGATGTTGGAATCTGTAACAGATTTG
TTTCAATACGTTTGCATTACAAATAATGATCTGAGGGGTGTGTTGCATACAAATAAATAA
TCATCTGATCGAGGGGTGTCTTGCACACACACACACAAAAATAATCATCTGGGCGTGTGG
TGGTGTGTGTCACGTTGAGGCCTCTCCGTCTTGTGTTTATCTAATTCTACTTGACTGCAA
TGCTAATCGTTGGGGCTACTGCATTGCAATCTGGGCCTCATTGTTAGGGCTACCGCTTTG
CAATCTGGG