Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES09088
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:330638:334281:-1 gene:SORBI_3005G004100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGACACCGACCCCCCTCCCTCCGTCACCCACGACGATGACGAGGATGATGACGAT
GAAGAATTCGATGACGACCTGGATGACGAAGCCGACGACGGCGGCGAACCCCCGGCGTCC
TCATCCGAGGCGGCTCGCCTCGAGGCCGTGCTCCGGCGGCTGACGGCGGACGAGGTCCGG
ATCCGGGTGCACCAGGTCACGATCCGGGGCTGCGACCGCACGCGCCGCGCCGCGGTCGAG
GCGGCGGTCGGCTTGGACCTCGCGCGCGCTGCCACTGTGCGGGACCTCGTGCGCGCCGCC
GCCGCGGCCGGCGACCGGCTCCGTCGCCTCGGCGCCTTCGACACTGTCTCCATCACCCTC
GACGCGGCGCCGCCTGGGATCCCCGGTAGCGCCGTCGTCGTCCTCGTTGACGTCGCGGAG
GCCCGAGGTCGCGCTGCCGGTGATTTTGGCGTCTTCGCCCACACGCAGACTAGATCATGC
TCACTTGAAGGTTCAGTGAAGTTGAAGAACCTATTTGGATTCTGTGAGACCTGGGATGCA
TCAGGCGCTCTTGAATTAGATAAGACAGCAGAACTAAGTGCTGGAGTCCAAATGCCTAGA
ATCGGAGCAATACCAACTCCGCTAGTGGCTAGAATATCATTTCTGTCTGATGACTGGTTA
AAGTCCTCGCTCAAAGAACACCTGATGGGCGTTTCTGTTGGCTTGCTCTCCACCATGAAC
CACAACCTTGCTTACAATTTGACATGGAGAAAATTAACTGATCCAACTCGCATGTCATCC
AATTCCGTACAGGAGGAATTAGGACATAGCCTTTTGTCCTCTATAAAGTACGCATACAAG
GTTGACCAAAGGGACTCAAGCATAAGACCTACACGTGGATATGCTTTTCTGTCGTCTTCT
CAAGTTGGAGGCCTTGCACCAGGGAGCAAATATTCACGATTTCTTAGGCAGGAATTTGAT
GTTCGTGTGGCTTTGCCTCTGGGTGTGCTGAATGGCGCTCTCAATGCCGGAGTGGCTGCG
GGAGTCATCCATCCATTGGAAAGGGGATCCACAGGATCTGTCTCACCACTTTTAGAAAGA
TTTTACTTGGGTGGTAATAGGCCTCTTGTATGCCGCTTGGGTGGACCATCTTCACTATTA
GGCTTCAAAACAAGAGGACTGGGGGCAACAGAATCCAGAACATATGACCCCAATAATTCT
GACAATGGCACTTCCAGTTCTCCTGAGCTAAATGGACTTGGAGGTGACATAGCAGTGACA
GCCTTTGCCGACCTGTCATTTGATCTGCCTCTGAAGCCGCTCAGGGAGCTGGGAATTCAT
GGCCATGCCTTTGTCTGTGCTGGAAATCTTGGTAAATTAACTGAGTGTGATCTAAGGAAG
TTCCCTGTTACTGACTTCCTACAAACATTCAGAAGTTCTGCAGGATTCGGCGTAGTTGTG
CCAACCAGACTGTTCCGCATAGAGATGAATTACTGCTACATCCTAAAACAGCTTGATCAT
GACAAGGGGAAGACAGGCATACAGTTTAACTTTTCATCGCCCTAA

Peptide Sequence

PEP ID

EES09088
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:330638:334281:-1 gene:SORBI_3005G004100 transcript:EES09088 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADTDPPPSVTHDDDEDDDDEEFDDDLDDEADDGGEPPASSSEAARLEAVLRRLTADEVR
IRVHQVTIRGCDRTRRAAVEAAVGLDLARAATVRDLVRAAAAAGDRLRRLGAFDTVSITL
DAAPPGIPGSAVVVLVDVAEARGRAAGDFGVFAHTQTRSCSLEGSVKLKNLFGFCETWDA
SGALELDKTAELSAGVQMPRIGAIPTPLVARISFLSDDWLKSSLKEHLMGVSVGLLSTMN
HNLAYNLTWRKLTDPTRMSSNSVQEELGHSLLSSIKYAYKVDQRDSSIRPTRGYAFLSSS
QVGGLAPGSKYSRFLRQEFDVRVALPLGVLNGALNAGVAAGVIHPLERGSTGSVSPLLER
FYLGGNRPLVCRLGGPSSLLGFKTRGLGATESRTYDPNNSDNGTSSSPELNGLGGDIAVT
AFADLSFDLPLKPLRELGIHGHAFVCAGNLGKLTECDLRKFPVTDFLQTFRSSAGFGVVV
PTRLFRIEMNYCYILKQLDHDKGKTGIQFNFSSP

Transcript Sequence

Transcript ID

EES09088
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:330638:334281:-1 gene:SORBI_3005G004100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CATGTCAAGTGTTGTAGCTTGGGGACTTCATCATTTCGAATGTGTTGTAGCTTGGGGACT
GATATGGTGGAATACACAGCATTAGTGCTGCTGTGTACTTCCTAGTTCCTGTTCTTCTCC
TTGTTTCTGTCTTAGGTTTGGGCTCTTGTTCTTCCATCTTTGAACAAAGTGTGGAGAATT
TTGATGGGCAATGAAAAAACAGATGACAATTTAGTTGTTCCATTCATTTGGATTCCAGCA
TAAACATTTATATTGCAAAAAAATAAATAAAAAAAATCACAAGTCTCTTCCTTTTCTCGG
TCAGAGATGCTTTAACCATCTGCGAAGTCCATTTTTCAGAAGAGAAGCAAAGTAAAGTAA
CAGACCACACTCCAGGTTAGTCTCTGCTCTCAACTGCTGCCATGGCAGACACCGACCCCC
CTCCCTCCGTCACCCACGACGATGACGAGGATGATGACGATGAAGAATTCGATGACGACC
TGGATGACGAAGCCGACGACGGCGGCGAACCCCCGGCGTCCTCATCCGAGGCGGCTCGCC
TCGAGGCCGTGCTCCGGCGGCTGACGGCGGACGAGGTCCGGATCCGGGTGCACCAGGTCA
CGATCCGGGGCTGCGACCGCACGCGCCGCGCCGCGGTCGAGGCGGCGGTCGGCTTGGACC
TCGCGCGCGCTGCCACTGTGCGGGACCTCGTGCGCGCCGCCGCCGCGGCCGGCGACCGGC
TCCGTCGCCTCGGCGCCTTCGACACTGTCTCCATCACCCTCGACGCGGCGCCGCCTGGGA
TCCCCGGTAGCGCCGTCGTCGTCCTCGTTGACGTCGCGGAGGCCCGAGGTCGCGCTGCCG
GTGATTTTGGCGTCTTCGCCCACACGCAGACTAGATCATGCTCACTTGAAGGTTCAGTGA
AGTTGAAGAACCTATTTGGATTCTGTGAGACCTGGGATGCATCAGGCGCTCTTGAATTAG
ATAAGACAGCAGAACTAAGTGCTGGAGTCCAAATGCCTAGAATCGGAGCAATACCAACTC
CGCTAGTGGCTAGAATATCATTTCTGTCTGATGACTGGTTAAAGTCCTCGCTCAAAGAAC
ACCTGATGGGCGTTTCTGTTGGCTTGCTCTCCACCATGAACCACAACCTTGCTTACAATT
TGACATGGAGAAAATTAACTGATCCAACTCGCATGTCATCCAATTCCGTACAGGAGGAAT
TAGGACATAGCCTTTTGTCCTCTATAAAGTACGCATACAAGGTTGACCAAAGGGACTCAA
GCATAAGACCTACACGTGGATATGCTTTTCTGTCGTCTTCTCAAGTTGGAGGCCTTGCAC
CAGGGAGCAAATATTCACGATTTCTTAGGCAGGAATTTGATGTTCGTGTGGCTTTGCCTC
TGGGTGTGCTGAATGGCGCTCTCAATGCCGGAGTGGCTGCGGGAGTCATCCATCCATTGG
AAAGGGGATCCACAGGATCTGTCTCACCACTTTTAGAAAGATTTTACTTGGGTGGTAATA
GGCCTCTTGTATGCCGCTTGGGTGGACCATCTTCACTATTAGGCTTCAAAACAAGAGGAC
TGGGGGCAACAGAATCCAGAACATATGACCCCAATAATTCTGACAATGGCACTTCCAGTT
CTCCTGAGCTAAATGGACTTGGAGGTGACATAGCAGTGACAGCCTTTGCCGACCTGTCAT
TTGATCTGCCTCTGAAGCCGCTCAGGGAGCTGGGAATTCATGGCCATGCCTTTGTCTGTG
CTGGAAATCTTGGTAAATTAACTGAGTGTGATCTAAGGAAGTTCCCTGTTACTGACTTCC
TACAAACATTCAGAAGTTCTGCAGGATTCGGCGTAGTTGTGCCAACCAGACTGTTCCGCA
TAGAGATGAATTACTGCTACATCCTAAAACAGCTTGATCATGACAAGGGGAAGACAGGCA
TACAGTTTAACTTTTCATCGCCCTAATTTCTCTGGCAGCGTTGTCTATTTATTAAGATGA
ATATTCCAATTTTTCCCTCACTATTCTGATCTTCTTATGGAGGAGCCTGTCTAGAACTGC
CACATGTAAAAAGAAAGGCTCTCACGCTGTAACTATAAGTGATAAATTGTTTGTACTGTG
ATATGCATTTGATGCTGTGACCTGTAAAGCACAAAAGCAAACAAGGTTGGGAGCTTAAGT
TTTCAACGCTGATATGCATGTTTTGGACTGG