Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES08970
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:70130797:70134868:1 gene:SORBI_3005G215300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGCAGCAGCAGCAGCAGCCATCGCCGTAGTTGCCGCCACCATCATCCTCTCCGCC
GCTACTACCATAACGCCGGCGGCCGCGGCGGCTGTCGAGCACACGTTCGTGGTGAGCCAG
GTGAACATGACGCACATGTGCAACGAGATTCCGGTCACTGTGGTGAACGGGCAGCTGCCG
GGGCCAACGATAGAGGTCACTGAGGGAGACTCGGTGATCGTGCACGTTGTCAACAAGTCG
CCCTACAATATGACAATCCATTGGCATGGAGTGTATCAGATGCGAAACTGTTGGAACGAC
GGGGTGCCAATGGTCACCCAACGCCCCATCCCTCCCAACGGCAACTTCACCTACCGGTTC
GACGTCGCCGGGCAGGAAGGCACCCTTTGGTGGCACGCCCACGACGCCTTCCTCCGGGGA
ACCATCTATGGCGCTCTCATCATCCGGCCCCGGCAAGGCGGCGCCGCCGCCTATCCGTTT
CCCAAGCCTCACAAGGAGGTCCCCATTCTCATAGGGGAATGGTGGGAGAAGGACCTTGCA
GCGGTGGACAGGAATTTTTCCAAAGGTCTATATGACGAATTCTCCAGTGGGTCCACAATC
AACGGCAAGCTTGGAGATCTCTTCAACTGCTCCGGTGTGTTTGAAGATGGCTACGTGCTG
GACGTGGAGCCCGGCAAGACATACCTGCTTCGAATAATCAACGCCGCGCTCTTCTCCGAG
TACTTCCTCAAGATCGCCGGGCACAAGTTCACGGTGGTCGCCGCCGACGCCAACTACCTC
ACGCCCTACACCACGGACGTCATCGTGATCGCGCCCGGCGAGACGATGGACGCCCTGGTC
GTCGCCGACGCGGCCCCCGGCAGGTACTACATCGCCGCCCAGCCTATCCAGGCGCCTCCG
CCGGACACGCAGACGCCGGAGTTCGCCACCCGGGGGACCTTGCAGTACAACACCGGCGGC
GCCACGAACTCGAGCCGTGACGACAACGTCGTGGCTCTGGCACCTGAGATGCCTGACGAG
CACGACACCATCAAGTCCTTCTACTTCCACGGCAACCTGACGGGCCTCCGCCACCGGCGG
CAGCGCGCGCGTGTGCCGGCGAGCGCCGACGAGCGGCTCTACGTCACGCTCGGGCTGGGC
TCCATCTGCCGGCACGGCCGCAAGACGTGCAAGAGAGGGGACGAGCCGGAGAGCAACCTG
GTGATCGCGAACATGAACAACGTCTCCTTCCACGACGCGACGGCGACGCCGATCCTCGAG
GCGCACTACTACCACCGCCGCCGCGACGACGACAACGGCGGCGAGGGCACGGCGGCGGTG
CTCCCCGACCATCCGCCGAGCGCGTTCAACTTCACCGACACGGCGCTGATCCCGTTCGGC
CCCGAGGAGATGCGGCTGGAGCCGACGAACAGGGGTACGGTGGTGCGGCGGTTCAGGCAC
GGCGCCGTGGTGGACGTCGTGTTCCAGAGCACCGCCATGCTGCAGAGCGACTCCAACCCG
ATGCATCTCCATGGACACGACATGTTCGTGCTCGCGCAGGGGATCGGCAACTACGACGCG
GCAAGGGACGAGGCCAAGTTCAACCTGGTGAACCCGGCGAGGAAGAACACTGTCCTCGTC
CCAAATCTTGGCTGGGCGGCCATAAGATTTGTCGCCGATAATCCAGGGGCATGGTTCATA
CATTGCCATTTTGAGTTCCATTTGGCGATGGGCATGGCTGCAGTGTTCATTGTAGAGGAT
GGACCAACGCCAAATACATCCCTCCCTCCACCACCACCGGGTTTCATGGAAGGAAGTCCA
TGA

Peptide Sequence

PEP ID

EES08970
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:70130797:70134868:1 gene:SORBI_3005G215300 transcript:EES08970 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAAAAAIAVVAATIILSAATTITPAAAAAVEHTFVVSQVNMTHMCNEIPVTVVNGQLP
GPTIEVTEGDSVIVHVVNKSPYNMTIHWHGVYQMRNCWNDGVPMVTQRPIPPNGNFTYRF
DVAGQEGTLWWHAHDAFLRGTIYGALIIRPRQGGAAAYPFPKPHKEVPILIGEWWEKDLA
AVDRNFSKGLYDEFSSGSTINGKLGDLFNCSGVFEDGYVLDVEPGKTYLLRIINAALFSE
YFLKIAGHKFTVVAADANYLTPYTTDVIVIAPGETMDALVVADAAPGRYYIAAQPIQAPP
PDTQTPEFATRGTLQYNTGGATNSSRDDNVVALAPEMPDEHDTIKSFYFHGNLTGLRHRR
QRARVPASADERLYVTLGLGSICRHGRKTCKRGDEPESNLVIANMNNVSFHDATATPILE
AHYYHRRRDDDNGGEGTAAVLPDHPPSAFNFTDTALIPFGPEEMRLEPTNRGTVVRRFRH
GAVVDVVFQSTAMLQSDSNPMHLHGHDMFVLAQGIGNYDAARDEAKFNLVNPARKNTVLV
PNLGWAAIRFVADNPGAWFIHCHFEFHLAMGMAAVFIVEDGPTPNTSLPPPPPGFMEGSP

Transcript Sequence

Transcript ID

EES08970
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:70130797:70134868:1 gene:SORBI_3005G215300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TATCTACACACACCACACATAGAAGTAGCTAGACTGCTCACACGCTACGTAGAAGTAGAC
GTGCAGAGCATCTTAAACAAAACTATACAAAGCTTCAAACATTGTTGTCCCCCATGGCAG
CAGCAGCAGCAGCAGCCATCGCCGTAGTTGCCGCCACCATCATCCTCTCCGCCGCTACTA
CCATAACGCCGGCGGCCGCGGCGGCTGTCGAGCACACGTTCGTGGTGAGCCAGGTGAACA
TGACGCACATGTGCAACGAGATTCCGGTCACTGTGGTGAACGGGCAGCTGCCGGGGCCAA
CGATAGAGGTCACTGAGGGAGACTCGGTGATCGTGCACGTTGTCAACAAGTCGCCCTACA
ATATGACAATCCATTGGCATGGAGTGTATCAGATGCGAAACTGTTGGAACGACGGGGTGC
CAATGGTCACCCAACGCCCCATCCCTCCCAACGGCAACTTCACCTACCGGTTCGACGTCG
CCGGGCAGGAAGGCACCCTTTGGTGGCACGCCCACGACGCCTTCCTCCGGGGAACCATCT
ATGGCGCTCTCATCATCCGGCCCCGGCAAGGCGGCGCCGCCGCCTATCCGTTTCCCAAGC
CTCACAAGGAGGTCCCCATTCTCATAGGGGAATGGTGGGAGAAGGACCTTGCAGCGGTGG
ACAGGAATTTTTCCAAAGGTCTATATGACGAATTCTCCAGTGGGTCCACAATCAACGGCA
AGCTTGGAGATCTCTTCAACTGCTCCGGTGTGTTTGAAGATGGCTACGTGCTGGACGTGG
AGCCCGGCAAGACATACCTGCTTCGAATAATCAACGCCGCGCTCTTCTCCGAGTACTTCC
TCAAGATCGCCGGGCACAAGTTCACGGTGGTCGCCGCCGACGCCAACTACCTCACGCCCT
ACACCACGGACGTCATCGTGATCGCGCCCGGCGAGACGATGGACGCCCTGGTCGTCGCCG
ACGCGGCCCCCGGCAGGTACTACATCGCCGCCCAGCCTATCCAGGCGCCTCCGCCGGACA
CGCAGACGCCGGAGTTCGCCACCCGGGGGACCTTGCAGTACAACACCGGCGGCGCCACGA
ACTCGAGCCGTGACGACAACGTCGTGGCTCTGGCACCTGAGATGCCTGACGAGCACGACA
CCATCAAGTCCTTCTACTTCCACGGCAACCTGACGGGCCTCCGCCACCGGCGGCAGCGCG
CGCGTGTGCCGGCGAGCGCCGACGAGCGGCTCTACGTCACGCTCGGGCTGGGCTCCATCT
GCCGGCACGGCCGCAAGACGTGCAAGAGAGGGGACGAGCCGGAGAGCAACCTGGTGATCG
CGAACATGAACAACGTCTCCTTCCACGACGCGACGGCGACGCCGATCCTCGAGGCGCACT
ACTACCACCGCCGCCGCGACGACGACAACGGCGGCGAGGGCACGGCGGCGGTGCTCCCCG
ACCATCCGCCGAGCGCGTTCAACTTCACCGACACGGCGCTGATCCCGTTCGGCCCCGAGG
AGATGCGGCTGGAGCCGACGAACAGGGGTACGGTGGTGCGGCGGTTCAGGCACGGCGCCG
TGGTGGACGTCGTGTTCCAGAGCACCGCCATGCTGCAGAGCGACTCCAACCCGATGCATC
TCCATGGACACGACATGTTCGTGCTCGCGCAGGGGATCGGCAACTACGACGCGGCAAGGG
ACGAGGCCAAGTTCAACCTGGTGAACCCGGCGAGGAAGAACACTGTCCTCGTCCCAAATC
TTGGCTGGGCGGCCATAAGATTTGTCGCCGATAATCCAGGGGCATGGTTCATACATTGCC
ATTTTGAGTTCCATTTGGCGATGGGCATGGCTGCAGTGTTCATTGTAGAGGATGGACCAA
CGCCAAATACATCCCTCCCTCCACCACCACCGGGTTTCATGGAAGGAAGTCCATGACAAT
AATCTCCTGTTCCAAGTTATTTCTACCTCATCCAAAAAAAAAAGAACTGCGAACTCTCAA
GAGACATGGAGTCAGCGTCTATCTAGAAGATAATCTTCTACTGTTAGTAGTTTCTGAATA
AACCAATTAATTTATGAATTAATGATGTATGTATTCTTAGAGACAAATAAACGTATGTGT
CATTTTCATGTAGCTTGCTCAAATATTCATTATGGTGCTTGATTGCATGTGTAAGCATCT
TTGTCTGTGTGGGGGTATAAAACCCCTATACCCTTACGGCTAGACTTGGGCCAGGAAGCT
TGGCCCATTACGAGACGAGTTTAAGGCTTGATCCGACAGCTTGGAGTCTTGCGCAAGGAA
ACAAGACGTGGAGATCAAGCAAGATTCTAGTCGGTTAGGATAGGAATTGATATCGAACTA
TCTATGGCAATTGTAACCGACTAGGATTAGTTTCCAGATCTGTAACCCTGCCCTCCGGAC
TATATAAGGAGAGGCAAGGGACCCCCCTAGATCATCATATTCTCTCAACACAAATCAATA
CAACCAGACGCAGGACGTAGGTATTACGCCAACTCGACG