Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES08398
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:19797305:19799526:1 gene:SORBI_3005G105700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCACCTACCCCTCCACGCTAGGCGCTGCTCCTAAATCATTCTTCTTGTCCAACTCT
CTCTTCAATATCAGCTTGGGAACGGCAACTCCTAGCCGTATCAGCTCGGTGAAGGCCGCT
GGAGAGTGCTGGACGAAGCATCCTGCCTGGACCAATGTCCGGCAAGAACGGTGGGAGGGT
CATTTGGCCGTGGAAGGACACCTGCCTACTTGGCTGAATGGCACGTACCTAAGGAACGGG
CCAGGTCTCTGGGAAGTCGGCGACCACTCCTCCCACCACATATTCGACGGGTACGCCACA
CTGGTGCGCATCTCCTTCCGGCGAGGATGCGCCACCGGAGCACATCGTCAGGTCGAGTCG
GACGCGTACAAAGCTGCCCGGGCGCACGGCCGTCCTCTCCACCGGGAATTCTCCCAACTG
TGTCCCTCGGAGCCTGGAACCCTGCTCGACCGCGTGCGCGACGTCGTCGGCCTCGCAAGC
GGCACTTTGCTCACCGACAACGCCAACGTCTCCGTGCTTCCTCTAGGGGATGGCCGGGTG
CTGTGCCTCACCGAGGCCACCAAGGGCTCCGTCCTGATAGACCCGGAAACTCTCGACACA
ATCGGCAAGTTTCGGTACGCGGATAGGCTATGGGGCTTGCTGCAGTCCGCGCACCCGGTT
GTGACAGGGAACGAGCTGTTGACGCTGCTCCCGGACATGTTCCGCCGTGGCCATCGTGTG
GTCAGGATGGCAGCCGGGAGCAACGAGAGGAAAATGGTCGGGAGAGTGCACTGCCGGGGA
GGGCAAGCACCGGGATGGGTGCATTCCTTCGCCGTGACGGAGAAGTACATCGTCGTGCCG
GAGATGCCCCTCCGATACTCCCTCGCCGGCGTTCTCAAGTCTCAGATGACACCTTGGTAT
CTCTTCGACTGGCTACCGGAGTCTGGGAGCTACATGCATGCCATATGCAGGTTCACCGGA
AAGACTGTGGCGAGCGTGGAGGTTCCTCCGTTCATGGCATTACACTTCATTAACGCATAC
GAACAAGGAGATGCGATCATTGCTGACTGCTGCGAGTACTATGCCGATCCTTCTGTCATC
AAGGCACTTGCACTGCGTAGACTAAGATCTCCCGGGATGAACAATGATGCATTCCCTGAT
GTTAGGGTTGCCCGGTTCAGTATACCACTGGATGGAACCCTCATGGGTGAGCTGGAGACT
GTGCTGGACCCTGAGGTGCATGGCCGGGGAGTGGAGATGCCTTCCATCAATCCGGCTTAC
CAGGGTAAGGAATACCGTTATGTGTACGCGTGTAGCGCGCGAAGGCCATGCAATTTCTTG
AACTGCCTCACCAAGATCGATCTTGGGGAGAAAGAGGCCAAGAACTGGCACGAGCTGGGC
TCTGTGCCATCAGAGCCCTTTTTTGTGGCGAGGCCAGGGGGATCTGATGAAGATGACGGG
GTTGTGATCTCCATCGTAAGCACCATGGAAGGTGATGGGTATGCGCTACTGCTGGACGCC
ATGACTTTTCAGGAAATTGCTCGAGTAAGGCTCCCCTACGGCCTACCATACGGCTTCCAT
GGCTGCTGGATTCCAGAGAATGTATGA

Peptide Sequence

PEP ID

EES08398
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:19797305:19799526:1 gene:SORBI_3005G105700 transcript:EES08398 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATYPSTLGAAPKSFFLSNSLFNISLGTATPSRISSVKAAGECWTKHPAWTNVRQERWEG
HLAVEGHLPTWLNGTYLRNGPGLWEVGDHSSHHIFDGYATLVRISFRRGCATGAHRQVES
DAYKAARAHGRPLHREFSQLCPSEPGTLLDRVRDVVGLASGTLLTDNANVSVLPLGDGRV
LCLTEATKGSVLIDPETLDTIGKFRYADRLWGLLQSAHPVVTGNELLTLLPDMFRRGHRV
VRMAAGSNERKMVGRVHCRGGQAPGWVHSFAVTEKYIVVPEMPLRYSLAGVLKSQMTPWY
LFDWLPESGSYMHAICRFTGKTVASVEVPPFMALHFINAYEQGDAIIADCCEYYADPSVI
KALALRRLRSPGMNNDAFPDVRVARFSIPLDGTLMGELETVLDPEVHGRGVEMPSINPAY
QGKEYRYVYACSARRPCNFLNCLTKIDLGEKEAKNWHELGSVPSEPFFVARPGGSDEDDG
VVISIVSTMEGDGYALLLDAMTFQEIARVRLPYGLPYGFHGCWIPENV

Transcript Sequence

Transcript ID

EES08398
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:19797305:19799526:1 gene:SORBI_3005G105700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCTCACAACACAAGAATGGCCACCTACCCCTCCACGCTAGGCGCTGCTCCTAAATCATTC
TTCTTGTCCAACTCTCTCTTCAATATCAGCTTGGGAACGGCAACTCCTAGCCGTATCAGC
TCGGTGAAGGCCGCTGGAGAGTGCTGGACGAAGCATCCTGCCTGGACCAATGTCCGGCAA
GAACGGTGGGAGGGTCATTTGGCCGTGGAAGGACACCTGCCTACTTGGCTGAATGGCACG
TACCTAAGGAACGGGCCAGGTCTCTGGGAAGTCGGCGACCACTCCTCCCACCACATATTC
GACGGGTACGCCACACTGGTGCGCATCTCCTTCCGGCGAGGATGCGCCACCGGAGCACAT
CGTCAGGTCGAGTCGGACGCGTACAAAGCTGCCCGGGCGCACGGCCGTCCTCTCCACCGG
GAATTCTCCCAACTGTGTCCCTCGGAGCCTGGAACCCTGCTCGACCGCGTGCGCGACGTC
GTCGGCCTCGCAAGCGGCACTTTGCTCACCGACAACGCCAACGTCTCCGTGCTTCCTCTA
GGGGATGGCCGGGTGCTGTGCCTCACCGAGGCCACCAAGGGCTCCGTCCTGATAGACCCG
GAAACTCTCGACACAATCGGCAAGTTTCGGTACGCGGATAGGCTATGGGGCTTGCTGCAG
TCCGCGCACCCGGTTGTGACAGGGAACGAGCTGTTGACGCTGCTCCCGGACATGTTCCGC
CGTGGCCATCGTGTGGTCAGGATGGCAGCCGGGAGCAACGAGAGGAAAATGGTCGGGAGA
GTGCACTGCCGGGGAGGGCAAGCACCGGGATGGGTGCATTCCTTCGCCGTGACGGAGAAG
TACATCGTCGTGCCGGAGATGCCCCTCCGATACTCCCTCGCCGGCGTTCTCAAGTCTCAG
ATGACACCTTGGTATCTCTTCGACTGGCTACCGGAGTCTGGGAGCTACATGCATGCCATA
TGCAGGTTCACCGGAAAGACTGTGGCGAGCGTGGAGGTTCCTCCGTTCATGGCATTACAC
TTCATTAACGCATACGAACAAGGAGATGCGATCATTGCTGACTGCTGCGAGTACTATGCC
GATCCTTCTGTCATCAAGGCACTTGCACTGCGTAGACTAAGATCTCCCGGGATGAACAAT
GATGCATTCCCTGATGTTAGGGTTGCCCGGTTCAGTATACCACTGGATGGAACCCTCATG
GGTGAGCTGGAGACTGTGCTGGACCCTGAGGTGCATGGCCGGGGAGTGGAGATGCCTTCC
ATCAATCCGGCTTACCAGGGTAAGGAATACCGTTATGTGTACGCGTGTAGCGCGCGAAGG
CCATGCAATTTCTTGAACTGCCTCACCAAGATCGATCTTGGGGAGAAAGAGGCCAAGAAC
TGGCACGAGCTGGGCTCTGTGCCATCAGAGCCCTTTTTTGTGGCGAGGCCAGGGGGATCT
GATGAAGATGACGGGGTTGTGATCTCCATCGTAAGCACCATGGAAGGTGATGGGTATGCG
CTACTGCTGGACGCCATGACTTTTCAGGAAATTGCTCGAGTAAGGCTCCCCTACGGCCTA
CCATACGGCTTCCATGGCTGCTGGATTCCAGAGAATGTATGAGAACGCTGTGTATTGCCC
CTCAGTTCAACATTGAAGCATGACCTATCAATTACTCCAGTACATTGATATGCATTCGCA
TAAATATGCAGAAATCCACTTCGTAGCTATGATATTAATTACTATCCCATCACCATGGCA
ATGTTGTTCATAAAAAAACCATGGGTAATGTTGTGTGGTACGATTGCAAGCATGTCAACA
GCACATGCTTCATCAGCAAATGACTTCTT