Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES08104
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:5:6940551:6944599:1 gene:SORBI_3005G063400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATCGGTGATGAAGTGGATTCAGATGTTGTTGTACGCTACTTCAGAGGCAAGAGCATC
CTGATCACTGGTTCAACTGGCTTCCTGGGGAAAGTGCTTGTGGAGAAGATACTGAGGGTT
CAGCCGGACGTCAAGAAGATCTTCCTCCTTATTCGAGCCGCCGATGTCGAGTCTGCGAAG
CAGAGGGTCGAGACCGAGGTGACAGGAAGGGAGATCTTCCAAATTTTGAAAAACAAGCAT
GGTAATGGGTTTGAAGGTTTCATCCAAGAAAAAATATGCCCTTTACCAGGAGACGTCATG
TATGAGAACTTGGGCCTAGGCCCTGCCAAACTGAGAGAAGTATGCAAAGAAATAGACATC
ATTGTCAATGGAGCTGCAACTACAAATTTCTACGAAAGGTATGATGTGGCTTTCGACACA
AATGTCATGGGAGCCAAACACATTTGTGAGTTTGCAAAAAGGTGCAGTAAACTCAAGATG
CTGCTACATGTTTCAACAGCTTATGTAGCCGGTGAACAAGAAGGGGTAGTGCTAGAGAAG
CCATTCCGTTTGGGTGAAACCCTGAGGGAAGGCACGCACCTGGACATCGAATCCGAACTA
AATCTGATAAAAGAGACCAGGAGAGAACTGAAAGCCAACTGTTCTTCGGAAAAGGTTGAG
AGAAGAACCATGAAGGATCTTGGCCTCAAGAGGGCAAGGGAGTTTGGGTGGCCAAACACC
TATGTGTTCACCAAAGCCATGGGGGAGATGCTGCTGGGACACCTTCGAGGAGATCTCCCA
GTCGTCATCGTCCGGCCGAGCATCATAACCAGCATCCTGAACGAGCCGTTGCCTGGATGG
ATGGAAGGGATCAGGACAATTGACTCGTTCATCATCGGCTACGCGAAGCAGGCTCTGTCA
ATCTTCTTAGTTGACCTCGAGTTGATAATGGACGTGATTCCGGGGGACATGGTGGTGAAC
GCCATGATGGTGGCCATGGCGGCGCACTCGGAGGAGCAGGCGCAGCAACTGAGCATCTAC
CACCTGACGTCGTCGGTGCGGCACCCGGCGCCGTACGCCGTCCTCGCGGAGTGCGGCCAC
CGCTACTTCCTCCACAATCCACTGATGAGGTCCGGGTCCGGGTCCGGCGGCAAGAACAGC
GGCGAGCCCGTGCGGCCTGCCAGGATGCGCTTCTTCCGCACGCTCCCCAGGTTCCGCGCC
TACATGGCCGTCAAGTTCAGGCTTCCCCGCGAGATCCTTCGCCTGCTCAACATCGCCCTG
TGCGGCGCGTTCTCCCGGCGCTACGACGAGCTCAGCAGGAAGTACAGATACGTCATGCAT
ATTGCAGAGCTGTACGCGCCATACGCCTTGTTCAAAGGATGCTTTGATGACTCCAACACG
GAGAGGCTGAGGGTGGCGATGGCGAACAACAACAACAACAACAATAATAACGGGCAAGAC
AGGAAATATGATGAGTTTGGTTTTGATCCCAAGTGCATAGACTGGGACGACTACTTCTAC
AGGGTTCACATCCCCGGTGTTGTCAAGTACCTGTGGGATTAG

Peptide Sequence

PEP ID

EES08104
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:5:6940551:6944599:1 gene:SORBI_3005G063400 transcript:EES08104 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MIGDEVDSDVVVRYFRGKSILITGSTGFLGKVLVEKILRVQPDVKKIFLLIRAADVESAK
QRVETEVTGREIFQILKNKHGNGFEGFIQEKICPLPGDVMYENLGLGPAKLREVCKEIDI
IVNGAATTNFYERYDVAFDTNVMGAKHICEFAKRCSKLKMLLHVSTAYVAGEQEGVVLEK
PFRLGETLREGTHLDIESELNLIKETRRELKANCSSEKVERRTMKDLGLKRAREFGWPNT
YVFTKAMGEMLLGHLRGDLPVVIVRPSIITSILNEPLPGWMEGIRTIDSFIIGYAKQALS
IFLVDLELIMDVIPGDMVVNAMMVAMAAHSEEQAQQLSIYHLTSSVRHPAPYAVLAECGH
RYFLHNPLMRSGSGSGGKNSGEPVRPARMRFFRTLPRFRAYMAVKFRLPREILRLLNIAL
CGAFSRRYDELSRKYRYVMHIAELYAPYALFKGCFDDSNTERLRVAMANNNNNNNNNGQD
RKYDEFGFDPKCIDWDDYFYRVHIPGVVKYLWD

Transcript Sequence

Transcript ID

EES08104
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:5:6940551:6944599:1 gene:SORBI_3005G063400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACGTCTCTCTCTGCTTCGCGCCTATAAATACATGGTCTGAGGATATTGATCCCAAAGCTA
ACAGAGCATAGTAAATCTCATCAGAAACTCTTAGATATATAGACCGACACGGACCACACT
TGCACATTCCAAGATGATCGGTGATGAAGTGGATTCAGATGTTGTTGTACGCTACTTCAG
AGGCAAGAGCATCCTGATCACTGGTTCAACTGGCTTCCTGGGGAAAGTGCTTGTGGAGAA
GATACTGAGGGTTCAGCCGGACGTCAAGAAGATCTTCCTCCTTATTCGAGCCGCCGATGT
CGAGTCTGCGAAGCAGAGGGTCGAGACCGAGGTGACAGGAAGGGAGATCTTCCAAATTTT
GAAAAACAAGCATGGTAATGGGTTTGAAGGTTTCATCCAAGAAAAAATATGCCCTTTACC
AGGAGACGTCATGTATGAGAACTTGGGCCTAGGCCCTGCCAAACTGAGAGAAGTATGCAA
AGAAATAGACATCATTGTCAATGGAGCTGCAACTACAAATTTCTACGAAAGGTATGATGT
GGCTTTCGACACAAATGTCATGGGAGCCAAACACATTTGTGAGTTTGCAAAAAGGTGCAG
TAAACTCAAGATGCTGCTACATGTTTCAACAGCTTATGTAGCCGGTGAACAAGAAGGGGT
AGTGCTAGAGAAGCCATTCCGTTTGGGTGAAACCCTGAGGGAAGGCACGCACCTGGACAT
CGAATCCGAACTAAATCTGATAAAAGAGACCAGGAGAGAACTGAAAGCCAACTGTTCTTC
GGAAAAGGTTGAGAGAAGAACCATGAAGGATCTTGGCCTCAAGAGGGCAAGGGAGTTTGG
GTGGCCAAACACCTATGTGTTCACCAAAGCCATGGGGGAGATGCTGCTGGGACACCTTCG
AGGAGATCTCCCAGTCGTCATCGTCCGGCCGAGCATCATAACCAGCATCCTGAACGAGCC
GTTGCCTGGATGGATGGAAGGGATCAGGACAATTGACTCGTTCATCATCGGCTACGCGAA
GCAGGCTCTGTCAATCTTCTTAGTTGACCTCGAGTTGATAATGGACGTGATTCCGGGGGA
CATGGTGGTGAACGCCATGATGGTGGCCATGGCGGCGCACTCGGAGGAGCAGGCGCAGCA
ACTGAGCATCTACCACCTGACGTCGTCGGTGCGGCACCCGGCGCCGTACGCCGTCCTCGC
GGAGTGCGGCCACCGCTACTTCCTCCACAATCCACTGATGAGGTCCGGGTCCGGGTCCGG
CGGCAAGAACAGCGGCGAGCCCGTGCGGCCTGCCAGGATGCGCTTCTTCCGCACGCTCCC
CAGGTTCCGCGCCTACATGGCCGTCAAGTTCAGGCTTCCCCGCGAGATCCTTCGCCTGCT
CAACATCGCCCTGTGCGGCGCGTTCTCCCGGCGCTACGACGAGCTCAGCAGGAAGTACAG
ATACGTCATGCATATTGCAGAGCTGTACGCGCCATACGCCTTGTTCAAAGGATGCTTTGA
TGACTCCAACACGGAGAGGCTGAGGGTGGCGATGGCGAACAACAACAACAACAACAATAA
TAACGGGCAAGACAGGAAATATGATGAGTTTGGTTTTGATCCCAAGTGCATAGACTGGGA
CGACTACTTCTACAGGGTTCACATCCCCGGTGTTGTCAAGTACCTGTGGGATTAGCTGAG
AGAGAGAGACGTATCTCATGTGTTTTAATACATACACGAGTATGTTGTCGGTGTGTGAGG
TGTGTTGTGCTGGAAATGTTGCAGATTCTTTTTTTTTTTGAATCATTGGGTATACTTTAT
TGATAAAAAATGGTTACATCATTTGCTAGAAACTGAACAATAAAACCAGGGGGATCATCG
TCCCAAATACAATTATC