Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES07540
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:64043587:64048373:-1 gene:SORBI_3004G301700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGACGAGGCGAAGGCGAAGGGTAATGCGGCGTTCTCGGCCGGCCGCTTCGAGGAG
GCGGCGCGGCACTTCACGGACGCCATCGCGCTCGCCCCGGGCAACCACGTCCTCTACTCC
AACCGGTCGGCGGCGCTCGCCTCGCTCCACCGCTACTCCGATGCGCTCGCCGACGCGCAC
AAGACCGTCGAGCTCAAGCCCGACTGGGCCAAGGGCTACTCCCGCCTCGGCGCGGCGCAC
CTCGGTCTCGGCGACGCCGCCAGCGCCGTCGCGGCGTACGAGAAGGGCCTCGCGCTCGAC
CCCAGCAACGACGGCCTCAAGGCGGGGCTCGACGACGCTAAGAAGGCGGCCGCCGCCCCG
CCCCGCCGCGGGCCGTCCGGCCCCGACGGCCTCGGCCAGATGTTCCAGGGCCCCGAGCTG
TGGAGCAAGATCGCGTCCGACCCCACCACGCGCGCCTACCTTAGCGAGCCCGATTTTATG
CAGATGCTGCGCGAGGTGCAGAGGAATCCCAGCAGCATCAGTATGTACCTCTCCGATCCC
CGGATGATGCAGGTGCTCAGCCTCATGCTTAACGTCAAGATCCAGAGACCCGAGGCCTCC
GAGTCGTCGCAGTCTACTCCATCGCAGCCGCCGCCGCAGCAGCAGCAGACGCCGCCTCCT
GAGACAAAGGCGAGGGAGGTAGAGCCGGAACCGGAGCCAGAGCCAATGGATTTAACTGAT
GAGGAAAAGGATCGCAAGGAGAAGAAAGCTGCTGCTCAGAAGGAGAAGGAGTTAGGTAAC
ACAGCTTACAAGAAGAAGGACTTCGAGACGGCAATCCAGCATTACACCAAAGCCTTGGAA
CTTGACGATGAGGATATTTCCTATCTGACTAACCGAGCAGCAGTCTACATTGAGATGGGA
AAGTACGATGAATGCATCAAGGATTGCGATAAGGCTGTGGAGAGGGGAAGAGAGCTCCGT
GCTGATTTCAAGATGATTTCAAGGGCACTGACAAGAAAAGGAACAGCTCTGGTCAAACTT
GCTAAGACCTCTAAGGATTTTGATATTGCCATCGAGACCTTCCAGAAGGCTCTAACTGAG
CATCGGAACCCAGACACTCTTAAAAAGTTAAATGAGGCTGAGAGAGCAAAGAAAGATTTG
GAGCAACAAGAGTATTATGATCCAAAATTAGCAGATGAGGAGAGAGAGAAAGGTAACGAG
TTCTTCAAGGAGCAAAAATACCCAGAAGCAATAAAACACTACACAGAGGCTCTCAGGAGG
AACCCAAAGGATCCTAGGGTTTACAGCAATAGGGCCGCCTGCTACACCAAGTTAGGAGCC
ATGCCTGAAGGTCTTAAAGACGCAGAGAAGTGTCTTGATCTAGACCCCACCTTCACCAAA
GGGTATACAAGGAAAGGTGCAATTCAATTCTTCATGAAAGAATATGACAAGGCCATGGAA
ACCTACCAGGCTGGCTTGAAGCATGACCCAAACAACCCGGAACTGCTTGATGGTGTTAGG
AGGTGTATTGAACAGATCAACAAGGCCAACAGAGGTGAAATAAGTCAGGACGAATTGCAA
GAAAGACAGAACAAAGCTATGCAAGACCCAGAGATCCAGAACATTCTTACCGACCCTATC
ATGCGACAGGTGCTAATTGATTTCCAGGAGAACCCAAGGGCAGCCCAGGAGCACCTGAAG
AACCCCGGAGTTATGCAGAAGATTCAGAAGCTTGTAAGTGCTGGGATAGTTCAAATGAGA
TGA

Peptide Sequence

PEP ID

EES07540
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:64043587:64048373:-1 gene:SORBI_3004G301700 transcript:EES07540 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADEAKAKGNAAFSAGRFEEAARHFTDAIALAPGNHVLYSNRSAALASLHRYSDALADAH
KTVELKPDWAKGYSRLGAAHLGLGDAASAVAAYEKGLALDPSNDGLKAGLDDAKKAAAAP
PRRGPSGPDGLGQMFQGPELWSKIASDPTTRAYLSEPDFMQMLREVQRNPSSISMYLSDP
RMMQVLSLMLNVKIQRPEASESSQSTPSQPPPQQQQTPPPETKAREVEPEPEPEPMDLTD
EEKDRKEKKAAAQKEKELGNTAYKKKDFETAIQHYTKALELDDEDISYLTNRAAVYIEMG
KYDECIKDCDKAVERGRELRADFKMISRALTRKGTALVKLAKTSKDFDIAIETFQKALTE
HRNPDTLKKLNEAERAKKDLEQQEYYDPKLADEEREKGNEFFKEQKYPEAIKHYTEALRR
NPKDPRVYSNRAACYTKLGAMPEGLKDAEKCLDLDPTFTKGYTRKGAIQFFMKEYDKAME
TYQAGLKHDPNNPELLDGVRRCIEQINKANRGEISQDELQERQNKAMQDPEIQNILTDPI
MRQVLIDFQENPRAAQEHLKNPGVMQKIQKLVSAGIVQMR

Transcript Sequence

Transcript ID

EES07540
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:64043587:64048373:-1 gene:SORBI_3004G301700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAGACTTTTTCTGCTCGCCCCCTCCTCCGGCCCTCCCAGCCGCCAAGACTTCTAGGACCT
TCGACAGCTCGATCCGATCGGAGCCCCCCGCCATGGCCGACGAGGCGAAGGCGAAGGGTA
ATGCGGCGTTCTCGGCCGGCCGCTTCGAGGAGGCGGCGCGGCACTTCACGGACGCCATCG
CGCTCGCCCCGGGCAACCACGTCCTCTACTCCAACCGGTCGGCGGCGCTCGCCTCGCTCC
ACCGCTACTCCGATGCGCTCGCCGACGCGCACAAGACCGTCGAGCTCAAGCCCGACTGGG
CCAAGGGCTACTCCCGCCTCGGCGCGGCGCACCTCGGTCTCGGCGACGCCGCCAGCGCCG
TCGCGGCGTACGAGAAGGGCCTCGCGCTCGACCCCAGCAACGACGGCCTCAAGGCGGGGC
TCGACGACGCTAAGAAGGCGGCCGCCGCCCCGCCCCGCCGCGGGCCGTCCGGCCCCGACG
GCCTCGGCCAGATGTTCCAGGGCCCCGAGCTGTGGAGCAAGATCGCGTCCGACCCCACCA
CGCGCGCCTACCTTAGCGAGCCCGATTTTATGCAGATGCTGCGCGAGGTGCAGAGGAATC
CCAGCAGCATCAGTATGTACCTCTCCGATCCCCGGATGATGCAGGTGCTCAGCCTCATGC
TTAACGTCAAGATCCAGAGACCCGAGGCCTCCGAGTCGTCGCAGTCTACTCCATCGCAGC
CGCCGCCGCAGCAGCAGCAGACGCCGCCTCCTGAGACAAAGGCGAGGGAGGTAGAGCCGG
AACCGGAGCCAGAGCCAATGGATTTAACTGATGAGGAAAAGGATCGCAAGGAGAAGAAAG
CTGCTGCTCAGAAGGAGAAGGAGTTAGGTAACACAGCTTACAAGAAGAAGGACTTCGAGA
CGGCAATCCAGCATTACACCAAAGCCTTGGAACTTGACGATGAGGATATTTCCTATCTGA
CTAACCGAGCAGCAGTCTACATTGAGATGGGAAAGTACGATGAATGCATCAAGGATTGCG
ATAAGGCTGTGGAGAGGGGAAGAGAGCTCCGTGCTGATTTCAAGATGATTTCAAGGGCAC
TGACAAGAAAAGGAACAGCTCTGGTCAAACTTGCTAAGACCTCTAAGGATTTTGATATTG
CCATCGAGACCTTCCAGAAGGCTCTAACTGAGCATCGGAACCCAGACACTCTTAAAAAGT
TAAATGAGGCTGAGAGAGCAAAGAAAGATTTGGAGCAACAAGAGTATTATGATCCAAAAT
TAGCAGATGAGGAGAGAGAGAAAGGTAACGAGTTCTTCAAGGAGCAAAAATACCCAGAAG
CAATAAAACACTACACAGAGGCTCTCAGGAGGAACCCAAAGGATCCTAGGGTTTACAGCA
ATAGGGCCGCCTGCTACACCAAGTTAGGAGCCATGCCTGAAGGTCTTAAAGACGCAGAGA
AGTGTCTTGATCTAGACCCCACCTTCACCAAAGGGTATACAAGGAAAGGTGCAATTCAAT
TCTTCATGAAAGAATATGACAAGGCCATGGAAACCTACCAGGCTGGCTTGAAGCATGACC
CAAACAACCCGGAACTGCTTGATGGTGTTAGGAGGTGTATTGAACAGATCAACAAGGCCA
ACAGAGGTGAAATAAGTCAGGACGAATTGCAAGAAAGACAGAACAAAGCTATGCAAGACC
CAGAGATCCAGAACATTCTTACCGACCCTATCATGCGACAGGTGCTAATTGATTTCCAGG
AGAACCCAAGGGCAGCCCAGGAGCACCTGAAGAACCCCGGAGTTATGCAGAAGATTCAGA
AGCTTGTAAGTGCTGGGATAGTTCAAATGAGATGATCAAGCACGATGCGATTGTACCTGC
TTGTTCGTCCCTTGTGCTTGGCTTTGTTAGTTCACATGCCCCCCGGGTCATATATATCCT
TTAACAAGCAGCAGCAGCGGCAGAAGAATGAACATGCTGGGGGGATAATCTTTTTAGCAG
TTGGATTGTAAGTGCAATTAACATTGGGATTGTTCGTGTTTGTGGCACTGAGTCTAAGTA
TAGGCAACGTCTTGCTTTCTTGATGCTAGACTTTAAAATGATGCGCAAGCCACTTACTGA
TCCGCAGATTTCCTGATTTGATGGCATGTGCCCTTTACAAGGAGGGCTGCCTGCTAGTCT
GTGTCCAGTAAAACTGGTATCAACGCCGTCTTTGGCTTGATGAGTAACAATCCAATCCCA
GCT