Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES07141
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:56295692:56303571:-1 gene:SORBI_3004G213000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGAGGATCCTGCCGCGGAACAGGAGATGCGTCAGCTAGAGGACCGGCTCAGGGAG
GTCGGGGAACGGCTGCAGGCGCCACCCGACGACGCGGAGGACCTGCTCAACCTCCTCATC
GAAATTGAGGAGTGTTTACATAAAGTAGAGCAGTCACCTCCTGAAAGCACATCGAATGCT
CTTCGCCCAGCAACTGAAGCTCTGGTCAAGAAAGACCTGCTGGGCCATGCTAATTCAAAT
GTTAGACTTGGCGTGGCATCATGCATATCTGAGATCACACGTATCACAGCGCCTGATGCT
CCATATGATGACGATGCAATGAAGGATGTATTCTCTTTAATTGTGGGGGCCTTCGAGGAT
CTGGATGACGTAGAGAGCCCCTTCTTTGAAAGAAGAACTTCAATTCTTGATACTGTGGCA
AAAGTTCGGTCCTGCGTGGTGATGCTAGATCTTGAATGTGATGATTTGATAAATGATATG
TTCCATCACTTCTTGAGGACTGTTAATTCTGGACATTCAGAAGCTGTCATATCCTGCATG
GAAACAATAATGAGATTGGTAATCGAGGAGAGTGAGGATGTCCAACCACAGATTGCTTCA
TGTCTACTCCAAAATGTTAGAAAAGAAGAAAAGGAATCTTCTTCACCTTCCTTTGAGCTT
GCTGAAAAAGTGATAGATGCATGCCGTGAAAAACTTAAGCCAGTCTTTCTGCAATCACTA
AAAGGCACTTCCTTGAGCGAATACAGCCAAATTGTTGCATCAGTTTGTGAAGAGGTTTCA
GATGACAGGGAAGATAACAATGCTGATCCTTCTGGGAAGGATATGGTGGATGATGGCAAG
CTCTCTGAAAGGACTATTTCTGATGAATTACCTCAGGAATCTTCAAAGGCTGAGCAAGAT
GTTAGCCGTCCTGAACAAGATGGTACTTCTATGAATGGTAATACAGGTACTGCTATTAGC
AGTGGTGCTGCTCCACCAGATACTGGTGAGTCTGATGATCAAGGACCACCTTCTACAAAA
GAGAAGATTGAAAAACTTTGCAATGATGAAAACATAGCAGATGCTGATCAGTTGAAAACT
GACCACAATGAAGGTGCTGATTTCAATGCAGCAAAGCCCAAAAAGAAAGCTGCCCTTGAT
TCAGACAAAAGTACTAAGAATGAAGATCTTAGTACACCTACTAATTGTGAAGCAATTGTG
GATTCTGATGCTGACACTAAGAAGGGAGATCTTGTAGCATCTGCAGAAGGTACCAATGGA
GCAGCTGATGATGCATCAAGGCCTGCTGATAGTACACCTACTAAACCAAAGCGAGGCCGT
CCTCCTGGCCCAAAGTCATCGCAGACGAAGGCTGCTGGAAAGGATCAGTCTTCAGGTTTG
GATTTGAAAAAGGTCGAGGAGGCAGGTGATTCAGCTGCGAAGTTGGCGAAACGATCAGCT
AAGGATGAGAAGTCTTCCGCAAAGAAGGCTGGTGAAGGAGAATCGTCTAAGAAGACTCAA
AAGAACAACTCAAAACAGCAGAAGGATGAAACTCTTTCTGAGGATGATCCTGCCAAGGAT
CTGATCATAAAGGAAATGATATCGCCGAAATCTTCGACCAAGGGCCCAGGTAGAATCAAA
GGGCAAAGCACAGAGAATAACACACCTAAGATGAAGCAAGAACAAGAAACTGAAGAGCCT
CCCCGTTCAAGGAAAAGCAAAGGCCTTGATAGAAGTCTAGTTGGTGCAAGGATCAAAGTT
TGGTGGCCAGATGACAAGATGTTCTACAATGGTGTTGTGGAGTCATTTGATTCTGTTTCT
AAGAGGCACAAGGTCGCATATGATGATGGGGATGTAGAGGTACTACTGCTGAGGGATGAA
AAGTGGGAATTCATCAGTGAGGAGAAGGGAGCTTCTGTGGCATCTGAAAAGCCACGAGGC
AGAAAAAGGAAAGTGGATGCGGTGAAGGAAGAAAATACAGAAACACCTAGAAGTGATGCT
GTGGATACTCCAAAGAAAAGAGGACGTCCAAAAGGCGTGCGATCCAGCAATGGGACACCA
AGTAATTCAGCTACTCCAAGCACGAAGGGGAAAACTGCCGGCAAGGGTGCCAAAGAAACA
CCTAAAACTGGCCCCAACCTTAAAAAGGAACTTGAGAAGAGCTCCAAGGGCAAAGCTAGT
GTATCAACTGAGACAAATGATGAATTGCCTAAAGATGATGATAAGAGTGCGACCAAACCT
AAGGAGGCTATTAGCAAAGGTAAGGATTCAAAAGATGAAGGGAAATCCACTGAAGGAAAA
GCTAGGCCAGGTCGGAAACCAAGAAATGCTGGTACTCCCCTGAAGAGTGATGCTGACAAA
GAGAAGCGGAAGGAGAAAGAAGTCAAGGCAGCTGAAATAGAGCAGGAGGCATCAGGAAAT
GCTTCTACAGGAAAGTCAGGGAATGCTTCTACAGGAAAGAAGCGCAGAAGGAAGGCTTGA

Peptide Sequence

PEP ID

EES07141
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:56295692:56303571:-1 gene:SORBI_3004G213000 transcript:EES07141 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAEDPAAEQEMRQLEDRLREVGERLQAPPDDAEDLLNLLIEIEECLHKVEQSPPESTSNA
LRPATEALVKKDLLGHANSNVRLGVASCISEITRITAPDAPYDDDAMKDVFSLIVGAFED
LDDVESPFFERRTSILDTVAKVRSCVVMLDLECDDLINDMFHHFLRTVNSGHSEAVISCM
ETIMRLVIEESEDVQPQIASCLLQNVRKEEKESSSPSFELAEKVIDACREKLKPVFLQSL
KGTSLSEYSQIVASVCEEVSDDREDNNADPSGKDMVDDGKLSERTISDELPQESSKAEQD
VSRPEQDGTSMNGNTGTAISSGAAPPDTGESDDQGPPSTKEKIEKLCNDENIADADQLKT
DHNEGADFNAAKPKKKAALDSDKSTKNEDLSTPTNCEAIVDSDADTKKGDLVASAEGTNG
AADDASRPADSTPTKPKRGRPPGPKSSQTKAAGKDQSSGLDLKKVEEAGDSAAKLAKRSA
KDEKSSAKKAGEGESSKKTQKNNSKQQKDETLSEDDPAKDLIIKEMISPKSSTKGPGRIK
GQSTENNTPKMKQEQETEEPPRSRKSKGLDRSLVGARIKVWWPDDKMFYNGVVESFDSVS
KRHKVAYDDGDVEVLLLRDEKWEFISEEKGASVASEKPRGRKRKVDAVKEENTETPRSDA
VDTPKKRGRPKGVRSSNGTPSNSATPSTKGKTAGKGAKETPKTGPNLKKELEKSSKGKAS
VSTETNDELPKDDDKSATKPKEAISKGKDSKDEGKSTEGKARPGRKPRNAGTPLKSDADK
EKRKEKEVKAAEIEQEASGNASTGKSGNASTGKKRRRKA

Transcript Sequence

Transcript ID

EES07141
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:56295692:56303571:-1 gene:SORBI_3004G213000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCACGCACGCCCCCCAGCGCAGCGCCCGCAGCTAGGCAGCTAGCCAAACACAGCCCCAA
GCCCCCGCCCGCACCGAAACCTCGTCGCGTCGCGCGGAAGAGAGGAGAGGGGCGGGGGCC
GAGAAGGGAATACCGCTGCGGATTCCCTCGTCCTCCACCGCCGCTAAACCCTCCCGTGCT
CCTCCGCGGGCGCGGGACGCCGAGCGCGAAAGGCGCCCGCTCTCGGCCCGCCGCACCCCG
CACTCGCACTCGCGCCGCGAGGGGAAACCCTAGCCGCGGCAGATCTAGAGCGGGCGCTCT
CGATCTGGCCGCGTAGACCCCGTTTCGGCCGGGGAAATGGCGGAGGATCCTGCCGCGGAA
CAGGAGATGCGTCAGCTAGAGGACCGGCTCAGGGAGGTCGGGGAACGGCTGCAGGCGCCA
CCCGACGACGCGGAGGACCTGCTCAACCTCCTCATCGAAATTGAGGAGTGTTTACATAAA
GTAGAGCAGTCACCTCCTGAAAGCACATCGAATGCTCTTCGCCCAGCAACTGAAGCTCTG
GTCAAGAAAGACCTGCTGGGCCATGCTAATTCAAATGTTAGACTTGGCGTGGCATCATGC
ATATCTGAGATCACACGTATCACAGCGCCTGATGCTCCATATGATGACGATGCAATGAAG
GATGTATTCTCTTTAATTGTGGGGGCCTTCGAGGATCTGGATGACGTAGAGAGCCCCTTC
TTTGAAAGAAGAACTTCAATTCTTGATACTGTGGCAAAAGTTCGGTCCTGCGTGGTGATG
CTAGATCTTGAATGTGATGATTTGATAAATGATATGTTCCATCACTTCTTGAGGACTGTT
AATTCTGGACATTCAGAAGCTGTCATATCCTGCATGGAAACAATAATGAGATTGGTAATC
GAGGAGAGTGAGGATGTCCAACCACAGATTGCTTCATGTCTACTCCAAAATGTTAGAAAA
GAAGAAAAGGAATCTTCTTCACCTTCCTTTGAGCTTGCTGAAAAAGTGATAGATGCATGC
CGTGAAAAACTTAAGCCAGTCTTTCTGCAATCACTAAAAGGCACTTCCTTGAGCGAATAC
AGCCAAATTGTTGCATCAGTTTGTGAAGAGGTTTCAGATGACAGGGAAGATAACAATGCT
GATCCTTCTGGGAAGGATATGGTGGATGATGGCAAGCTCTCTGAAAGGACTATTTCTGAT
GAATTACCTCAGGAATCTTCAAAGGCTGAGCAAGATGTTAGCCGTCCTGAACAAGATGGT
ACTTCTATGAATGGTAATACAGGTACTGCTATTAGCAGTGGTGCTGCTCCACCAGATACT
GGTGAGTCTGATGATCAAGGACCACCTTCTACAAAAGAGAAGATTGAAAAACTTTGCAAT
GATGAAAACATAGCAGATGCTGATCAGTTGAAAACTGACCACAATGAAGGTGCTGATTTC
AATGCAGCAAAGCCCAAAAAGAAAGCTGCCCTTGATTCAGACAAAAGTACTAAGAATGAA
GATCTTAGTACACCTACTAATTGTGAAGCAATTGTGGATTCTGATGCTGACACTAAGAAG
GGAGATCTTGTAGCATCTGCAGAAGGTACCAATGGAGCAGCTGATGATGCATCAAGGCCT
GCTGATAGTACACCTACTAAACCAAAGCGAGGCCGTCCTCCTGGCCCAAAGTCATCGCAG
ACGAAGGCTGCTGGAAAGGATCAGTCTTCAGGTTTGGATTTGAAAAAGGTCGAGGAGGCA
GGTGATTCAGCTGCGAAGTTGGCGAAACGATCAGCTAAGGATGAGAAGTCTTCCGCAAAG
AAGGCTGGTGAAGGAGAATCGTCTAAGAAGACTCAAAAGAACAACTCAAAACAGCAGAAG
GATGAAACTCTTTCTGAGGATGATCCTGCCAAGGATCTGATCATAAAGGAAATGATATCG
CCGAAATCTTCGACCAAGGGCCCAGGTAGAATCAAAGGGCAAAGCACAGAGAATAACACA
CCTAAGATGAAGCAAGAACAAGAAACTGAAGAGCCTCCCCGTTCAAGGAAAAGCAAAGGC
CTTGATAGAAGTCTAGTTGGTGCAAGGATCAAAGTTTGGTGGCCAGATGACAAGATGTTC
TACAATGGTGTTGTGGAGTCATTTGATTCTGTTTCTAAGAGGCACAAGGTCGCATATGAT
GATGGGGATGTAGAGGTACTACTGCTGAGGGATGAAAAGTGGGAATTCATCAGTGAGGAG
AAGGGAGCTTCTGTGGCATCTGAAAAGCCACGAGGCAGAAAAAGGAAAGTGGATGCGGTG
AAGGAAGAAAATACAGAAACACCTAGAAGTGATGCTGTGGATACTCCAAAGAAAAGAGGA
CGTCCAAAAGGCGTGCGATCCAGCAATGGGACACCAAGTAATTCAGCTACTCCAAGCACG
AAGGGGAAAACTGCCGGCAAGGGTGCCAAAGAAACACCTAAAACTGGCCCCAACCTTAAA
AAGGAACTTGAGAAGAGCTCCAAGGGCAAAGCTAGTGTATCAACTGAGACAAATGATGAA
TTGCCTAAAGATGATGATAAGAGTGCGACCAAACCTAAGGAGGCTATTAGCAAAGGTAAG
GATTCAAAAGATGAAGGGAAATCCACTGAAGGAAAAGCTAGGCCAGGTCGGAAACCAAGA
AATGCTGGTACTCCCCTGAAGAGTGATGCTGACAAAGAGAAGCGGAAGGAGAAAGAAGTC
AAGGCAGCTGAAATAGAGCAGGAGGCATCAGGAAATGCTTCTACAGGAAAGTCAGGGAAT
GCTTCTACAGGAAAGAAGCGCAGAAGGAAGGCTTGAAGTTAACACTGATGAACTTCTCTT
GTAAATGGATGTGCTCCCTAGGTTTGCTCCTTTAGGCAGAGGCGTTGGCGCTGCACCTTG
TACTATTGAGCGTTAACTCGAAATTTCGTCTGATTGGTCTCTATTAGTTAGGTGTGGAAG
CAACATTTGCTATAGCTGTAATGTTAGGAGTAACATGTGTTCGTTGTGGTCAGATCCATG
TTGCATTGGCGCTGAGCCTTAAGCGGAATGAACCCTATGCTCGCTGTGAGGCCCATGGCA
TCGTGTTGTCGGGTGGTGTTGTAGCTTATTGATGTTCTATTTATTATAACCAATTTAAGC
AGTGGATTTTGTAGCAAATGCACCTTTTTAACTAGGATCTTGGCCTGTTTTTCAAGTTCA
AGGCTTGTTTCTCTGCTGTATGCT