Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES07083
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:55077813:55083163:-1 gene:SORBI_3004G200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTGACCGGAGCTCGTCGGCTGGGCCGACGTTTTTCCCCTTTGGCCCGCAGGCCGAG
GCGTGGGACGTCACCTTCAAGGTCAAATATGGTGATACTCTCAAAAGGTTTTATGGTTGT
GCCAATGGGAATCATTTTGACATGAATTTGTCTGCTCTGCGGGCAAAGATAGCTACTGCC
TTTAAGTTTGGTTCTGATGCTGACTTCATTCTGACTTACACTGATGAGGATGGGGATATT
GTCATGCTAGATGATGATGATGACTTGCGTGATGCAGCTCTGCGTCAGAAATTAAACCCT
CTGAGGATTACTGTTCAACTGAAGAAAAATCAACCAACTGATAAAAAAGATGTCTCTGCA
CCTGTGAAACCCATTACTCAGGATTCACTATCCCAGATAATGTCAGCTATTGAATTTTTG
AAGCCTGTCCAGGAAGATAGTCTTGCTCATATAAAATCAGCTATTGGTGAAGCAATCAAG
TCTGTCCCAGAGCCAATACCTGATGCCCTTGCAAAACTTTCTCATGAAATACTTGATGCA
GCACCACCACCATTAGCTGAGTTGATGAAACCTTTTGCACAATTGATGGCACCAAACAAT
AATGGCAATGGGCCATCTGATGTGCATGCTGAGGGGTCATCTACCTCTTCCAGTGGTGTG
ACACAGACACCGGCGCCGGCACCGGCACCGGTGCCGGCCGAAGCTAAAAATGAGCCCAAA
GTTACGCCAAGTTTGGGTCTTAGGGCTGTGTTCAAGGAGGCTGCTTCTCCTGTTCCTAAT
GCTGGAGCTTCTCAAGTTCAACAGCCATCAATGTACCCATCTGTTGAGGAGTTGCTGTTC
CCCCGTAATTCAGTAGACAAACCTGTCTGCAAAGGGAAGACTGATGCTCAAAGTAAGGGA
AAATCTGTTATGTCCTCACTTACCCAACCTGCCCCTTACTCTCTACCTACTCATGCCCCA
CCTCCGCCGCCTCCATGCATTTCAGAATGGTCCCGACCACGAAGAAGTTTACAACACCCA
TGGCAATATGAAGACAATGCAAAAGCCACTAGTGATTCTAGATGGCGCATTCCAATGTAC
AAAATGCCCTATGCACCACCTCCTCCAGCAGTGCCACCTCCAGGCTATGGACCTTCTCCA
CATTTTCCTTATCCAGGCCGCCTCTTGTCTTCGGGACATCCATACGGAGATCTTGCTGGT
AACATGGAAAACTCAGCACAACGTAGTCTGCATAGATGGATTCAGTGTGATGGTTGTGGA
GTGCAACCAATTGTTGGTCCGCGTTATAAATCTAATGTGAAGGAAGACTATGATTTATGT
GATTCCTGTTTCCAACGCATGGGAAATGAAATGGAGTACACCAAAATAGACAAACCTATT
TCACCCCACAAGTTTCTCAGAGATCCTCATGCGACCCGAAAGGTGCACCACACACGGGTT
CTAATGAAGTCAAAACGGGAGAAACTTGAAAGTCGCTTCATTTTGGATGTAACTGTCCTT
GATGGGACACTGATGACACCTTCTACCTCGTTCACTAAGATTTGGCGCATGCATAACAAT
GGGTCTGTTGTGTGGCCACTTGGCACACAGCTTATCTGGGTTGGTGGAGATCAGTTTGCA
TTGCAGTCATCTGTTCCGTTAGAGATTCCTGTGGATGGCTTTCCTGTGGACAAAGAGATT
GATGTTGCTGTTGATTTTGTGGCACCTAGAAGGCCAGGGAGATACATATCATACTGGAGG
TTGGCTTCACCTTCTGGTCAGAAATTTGGTCAGCGAGTTTGGGTTCATATCCAGGTGGAA
GACCCTTCTTTTGTTAATGACAATAACAGGAGTGCTGCTATTAATCTGAACCTGCCTCCA
GAGAGCAATAGTGCAAACACAACCAATTTAATTGATGTGAACATTGAGCCTGTTGACTCA
GCCCTTACTGCCAAACGCACAAAAGAGTTCCATTTCTGTTCAACTGATGTTTCTGGGCCC
AAGAAATCTCTGCCTGCCACGTTGGTTGCTACCTCTTCGTCTGCAGCAGCTCCTGCAAAC
CCAACCGGTGATGTTCCCATGTCCAGTGCACCTGCTGCTGCTTTTGTGCCCTCTGTTAAT
GTGCCTATGCCTGAAGTTGTAACTCATACACCATCACCTGCTATGCCCGTGCTGCCTACA
ACTATACCTATGTCAGCTCCAGTATCTGCGCCTGCAATTGCCCCTGTGTCTGCATCTGGG
GCTGTGCCTGCGCCTCCACCTGTTAGTGCCGTGGTTCCTGAGCTGTCCGACCTAGATGTT
CACAATGAGGAGAAGTTGCTGAGGGAGCTGGAGGAAATGGGCTTTAGGCAGATCGATCTC
AACAAAGAAATCCTTAGGCAGAACAATTACAACCTGGAGCAGTCTGTTGATGACCTATGT
GGCGTCAATGAATGGGATCCACTCCTTGCAGAGTTGGAAGAGATGGGATTTGATGACACA
GAGGTGAACAAGGAGCTGCTTGCGAAGAACGGAGGAAGCATCAAGCGAGCTGTGATGGAC
CTGATTGCCAGGGAGAAAAAGGACAAGTGA

Peptide Sequence

PEP ID

EES07083
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:55077813:55083163:-1 gene:SORBI_3004G200200 transcript:EES07083 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSDRSSSAGPTFFPFGPQAEAWDVTFKVKYGDTLKRFYGCANGNHFDMNLSALRAKIATA
FKFGSDADFILTYTDEDGDIVMLDDDDDLRDAALRQKLNPLRITVQLKKNQPTDKKDVSA
PVKPITQDSLSQIMSAIEFLKPVQEDSLAHIKSAIGEAIKSVPEPIPDALAKLSHEILDA
APPPLAELMKPFAQLMAPNNNGNGPSDVHAEGSSTSSSGVTQTPAPAPAPVPAEAKNEPK
VTPSLGLRAVFKEAASPVPNAGASQVQQPSMYPSVEELLFPRNSVDKPVCKGKTDAQSKG
KSVMSSLTQPAPYSLPTHAPPPPPPCISEWSRPRRSLQHPWQYEDNAKATSDSRWRIPMY
KMPYAPPPPAVPPPGYGPSPHFPYPGRLLSSGHPYGDLAGNMENSAQRSLHRWIQCDGCG
VQPIVGPRYKSNVKEDYDLCDSCFQRMGNEMEYTKIDKPISPHKFLRDPHATRKVHHTRV
LMKSKREKLESRFILDVTVLDGTLMTPSTSFTKIWRMHNNGSVVWPLGTQLIWVGGDQFA
LQSSVPLEIPVDGFPVDKEIDVAVDFVAPRRPGRYISYWRLASPSGQKFGQRVWVHIQVE
DPSFVNDNNRSAAINLNLPPESNSANTTNLIDVNIEPVDSALTAKRTKEFHFCSTDVSGP
KKSLPATLVATSSSAAAPANPTGDVPMSSAPAAAFVPSVNVPMPEVVTHTPSPAMPVLPT
TIPMSAPVSAPAIAPVSASGAVPAPPPVSAVVPELSDLDVHNEEKLLRELEEMGFRQIDL
NKEILRQNNYNLEQSVDDLCGVNEWDPLLAELEEMGFDDTEVNKELLAKNGGSIKRAVMD
LIAREKKDK

Transcript Sequence

Transcript ID

EES07083
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:55077813:55083163:-1 gene:SORBI_3004G200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTGACCGGAGCTCGTCGGCTGGGCCGACGTTTTTCCCCTTTGGCCCGCAGGCCGAG
GCGTGGGACGTCACCTTCAAGGTCAAATATGGTGATACTCTCAAAAGGTTTTATGGTTGT
GCCAATGGGAATCATTTTGACATGAATTTGTCTGCTCTGCGGGCAAAGATAGCTACTGCC
TTTAAGTTTGGTTCTGATGCTGACTTCATTCTGACTTACACTGATGAGGATGGGGATATT
GTCATGCTAGATGATGATGATGACTTGCGTGATGCAGCTCTGCGTCAGAAATTAAACCCT
CTGAGGATTACTGTTCAACTGAAGAAAAATCAACCAACTGATAAAAAAGATGTCTCTGCA
CCTGTGAAACCCATTACTCAGGATTCACTATCCCAGATAATGTCAGCTATTGAATTTTTG
AAGCCTGTCCAGGAAGATAGTCTTGCTCATATAAAATCAGCTATTGGTGAAGCAATCAAG
TCTGTCCCAGAGCCAATACCTGATGCCCTTGCAAAACTTTCTCATGAAATACTTGATGCA
GCACCACCACCATTAGCTGAGTTGATGAAACCTTTTGCACAATTGATGGCACCAAACAAT
AATGGCAATGGGCCATCTGATGTGCATGCTGAGGGGTCATCTACCTCTTCCAGTGGTGTG
ACACAGACACCGGCGCCGGCACCGGCACCGGTGCCGGCCGAAGCTAAAAATGAGCCCAAA
GTTACGCCAAGTTTGGGTCTTAGGGCTGTGTTCAAGGAGGCTGCTTCTCCTGTTCCTAAT
GCTGGAGCTTCTCAAGTTCAACAGCCATCAATGTACCCATCTGTTGAGGAGTTGCTGTTC
CCCCGTAATTCAGTAGACAAACCTGTCTGCAAAGGGAAGACTGATGCTCAAAGTAAGGGA
AAATCTGTTATGTCCTCACTTACCCAACCTGCCCCTTACTCTCTACCTACTCATGCCCCA
CCTCCGCCGCCTCCATGCATTTCAGAATGGTCCCGACCACGAAGAAGTTTACAACACCCA
TGGCAATATGAAGACAATGCAAAAGCCACTAGTGATTCTAGATGGCGCATTCCAATGTAC
AAAATGCCCTATGCACCACCTCCTCCAGCAGTGCCACCTCCAGGCTATGGACCTTCTCCA
CATTTTCCTTATCCAGGCCGCCTCTTGTCTTCGGGACATCCATACGGAGATCTTGCTGGT
AACATGGAAAACTCAGCACAACGTAGTCTGCATAGATGGATTCAGTGTGATGGTTGTGGA
GTGCAACCAATTGTTGGTCCGCGTTATAAATCTAATGTGAAGGAAGACTATGATTTATGT
GATTCCTGTTTCCAACGCATGGGAAATGAAATGGAGTACACCAAAATAGACAAACCTATT
TCACCCCACAAGTTTCTCAGAGATCCTCATGCGACCCGAAAGGTGCACCACACACGGGTT
CTAATGAAGTCAAAACGGGAGAAACTTGAAAGTCGCTTCATTTTGGATGTAACTGTCCTT
GATGGGACACTGATGACACCTTCTACCTCGTTCACTAAGATTTGGCGCATGCATAACAAT
GGGTCTGTTGTGTGGCCACTTGGCACACAGCTTATCTGGGTTGGTGGAGATCAGTTTGCA
TTGCAGTCATCTGTTCCGTTAGAGATTCCTGTGGATGGCTTTCCTGTGGACAAAGAGATT
GATGTTGCTGTTGATTTTGTGGCACCTAGAAGGCCAGGGAGATACATATCATACTGGAGG
TTGGCTTCACCTTCTGGTCAGAAATTTGGTCAGCGAGTTTGGGTTCATATCCAGGTGGAA
GACCCTTCTTTTGTTAATGACAATAACAGGAGTGCTGCTATTAATCTGAACCTGCCTCCA
GAGAGCAATAGTGCAAACACAACCAATTTAATTGATGTGAACATTGAGCCTGTTGACTCA
GCCCTTACTGCCAAACGCACAAAAGAGTTCCATTTCTGTTCAACTGATGTTTCTGGGCCC
AAGAAATCTCTGCCTGCCACGTTGGTTGCTACCTCTTCGTCTGCAGCAGCTCCTGCAAAC
CCAACCGGTGATGTTCCCATGTCCAGTGCACCTGCTGCTGCTTTTGTGCCCTCTGTTAAT
GTGCCTATGCCTGAAGTTGTAACTCATACACCATCACCTGCTATGCCCGTGCTGCCTACA
ACTATACCTATGTCAGCTCCAGTATCTGCGCCTGCAATTGCCCCTGTGTCTGCATCTGGG
GCTGTGCCTGCGCCTCCACCTGTTAGTGCCGTGGTTCCTGAGCTGTCCGACCTAGATGTT
CACAATGAGGAGAAGTTGCTGAGGGAGCTGGAGGAAATGGGCTTTAGGCAGATCGATCTC
AACAAAGAAATCCTTAGGCAGAACAATTACAACCTGGAGCAGTCTGTTGATGACCTATGT
GGCGTCAATGAATGGGATCCACTCCTTGCAGAGTTGGAAGAGATGGGATTTGATGACACA
GAGGTGAACAAGGAGCTGCTTGCGAAGAACGGAGGAAGCATCAAGCGAGCTGTGATGGAC
CTGATTGCCAGGGAGAAAAAGGACAAGTGA