Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES07020
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:53982411:53987262:-1 gene:SORBI_3004G187900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCGGTTGCGCCCCCGTCTTCCTCCGTGGCTGCCCTCACCCGCCAACCGGTGCAG
TTCTTGAAAGGGTGCAGTGTATCCAAGGAGACAAAGGGACCTATCAGCAGTTTCTTCCCT
GCAAATTCAAACAGCACTAAGGTGAAATCAGTGGGCTTGAGAGTAGCATCATCCTTCAGA
AGTGATGGCAGTTATCCAGCTGGCGGTGTCTCTGGGAATGGCGACACGCTATTGCCAAAA
AGCACATCCGTCCGTGGCCAGGACCATCCGGTTGCTGACCCTGTACTCCCATTGGATTCC
ATGATTACGCCAGAAATCCTCTCTACTAATTTGGCACGTGCTGTGGAGAAGTTCTCAGAT
GATGACACAGATACTGAACTTGATTTGGATAGCCCGACAGAGGGCTTCGCATCGATTGCA
GATGCCATTGAGGACATACGACAAGGAAAACTTGTGATTGTTGTTGACGACGAATCAAGG
GAAAATGAAGGAGATCTGATAATGGCTGCCAACTTGGTTACCCCAGAGGCTATGGCTTTT
ATAGTAAGGCATGGGACAGGAATTGTTTGTGTCAGCATGAAAGAAGATGATCTGGAAAGA
CTGAACCTTCCTTTGATGGTTACCACAAAAGAAAACGAGGAGAAGCTATGCACTGCTTTC
ACTGTTACAGTGGATGCAAAAGAGGGCACAACTACTGGGGTATCTGCCAAGGACAGGGCA
AAAACAGTCATGACTCTTGCATCTCCTGACTCTAAGCCTGAGGACTTCAACCGCCCTGGT
CATATTTTCCCTTTGAAATACAGAGAAGGAGGTGTTCTGAAACGAGCTGGACACACCGAG
GCATCTGTTGATCTTGCCATGCTGGCTGGATTACCTCCTGTTGCTGTCCTTTGTGAGATT
GTGGATGATGCAGATGGTTCCATGGCTCGCCTACCAAAGTTGCGTGTCTTTGCTGAAAAG
GAGAATTTGAAGATTATATCTATTGCTGACTTGATTAGGTATAGGAGGAAACGAGACAGG
CTAATTGAACGTGCTTCTGTTGCGCGCTTGCCTTTGAAATGGGGCAATGTCCGTGCCTAT
TGCTACAAATCTGTTATCGATGGCATAGAGCATATTGCCATGGTGAAAGGTGATATTGGC
GATGGCCAAGACATTTTGGTGAGGGTGCACTCTGAGTGCCTCACAGGCGACATTTTTGGA
TCAGCGAGATGTGATTGTGGTGACCAGCTTGCAATGGCAATGGAGATGATTGAGAAGGCT
GGAAGGGGTGTATTAGTTTATCTCCGTGGACATGAAGGAAGGGGTATTGGCCTGGGCCAC
AAGCTTCGTGCCTATAACTTACAGGATGATGGGCGTGATACTGTGGAAGCTAATGAGGAA
CTTGGTCTTCCTGTGGACTCACGGGAATATGGGATTGGCGCACAGATATTACGGGATCTA
GGAGTCCGTTCAATGAAGCTGATGACTAATAACCCTGCAAAATATAGTGGTCTGAAGGGT
TATGGACTGAGCATTGCGGGCAGGGTGCCCTTGATTACGCCAATTACCAGTGAGAACCGT
AAGTACCTGGAGACCAAAAGAACAAAGATGGGACATGTATATGGATTGGCTAATGTGCAG
GCTAACCAACCAAGTGGCAGCCAGAGCACAGAAGAGAAGCATTAG

Peptide Sequence

PEP ID

EES07020
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:53982411:53987262:-1 gene:SORBI_3004G187900 transcript:EES07020 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASVAPPSSSVAALTRQPVQFLKGCSVSKETKGPISSFFPANSNSTKVKSVGLRVASSFR
SDGSYPAGGVSGNGDTLLPKSTSVRGQDHPVADPVLPLDSMITPEILSTNLARAVEKFSD
DDTDTELDLDSPTEGFASIADAIEDIRQGKLVIVVDDESRENEGDLIMAANLVTPEAMAF
IVRHGTGIVCVSMKEDDLERLNLPLMVTTKENEEKLCTAFTVTVDAKEGTTTGVSAKDRA
KTVMTLASPDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLPPVAVLCEI
VDDADGSMARLPKLRVFAEKENLKIISIADLIRYRRKRDRLIERASVARLPLKWGNVRAY
CYKSVIDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLAMAMEMIEKA
GRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDL
GVRSMKLMTNNPAKYSGLKGYGLSIAGRVPLITPITSENRKYLETKRTKMGHVYGLANVQ
ANQPSGSQSTEEKH

Transcript Sequence

Transcript ID

EES07020
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:53982411:53987262:-1 gene:SORBI_3004G187900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGCGTCCCGGCGTCCGCAGCACCAACCCCCGCTTTCCTCCCTCCGCCGAATCACCCCCA
AAACAAACCAAAACCCAAACAGCACTTGTCCTCCGAGGACAATCGCCGACGTCGCCGGCC
GGAGCAGCCAGACGCCGCCGACGGTAAGACATTCCCGCGCCCCCAGCCCGCTCCTTCCCG
TCGTCTCCTAAAGCTTCTGGGCGCGAGGAATCGCCAGCTCGGCCGCCTCGGTTCCGCCCG
TAACCAGATCCCGCCCGCTCTTCCGACGGGAGGCTTCCCCCGTTTTTCTTCGGATCCCCA
TGTTCCTCGATTCCTATTGTGAAATTCGAGGCTGGTTGACCATTCGATGTCGTGTTTGCT
TTAATCCGTGCGCGCGCTCCCATGTGATTGCAGGTTGCTTTGCGCCTCATCGTCCGGCCC
GGCGGCCCAGGGCGAGCATGGCTTCGGTTGCGCCCCCGTCTTCCTCCGTGGCTGCCCTCA
CCCGCCAACCGGTGCAGTTCTTGAAAGGGTGCAGTGTATCCAAGGAGACAAAGGGACCTA
TCAGCAGTTTCTTCCCTGCAAATTCAAACAGCACTAAGGTGAAATCAGTGGGCTTGAGAG
TAGCATCATCCTTCAGAAGTGATGGCAGTTATCCAGCTGGCGGTGTCTCTGGGAATGGCG
ACACGCTATTGCCAAAAAGCACATCCGTCCGTGGCCAGGACCATCCGGTTGCTGACCCTG
TACTCCCATTGGATTCCATGATTACGCCAGAAATCCTCTCTACTAATTTGGCACGTGCTG
TGGAGAAGTTCTCAGATGATGACACAGATACTGAACTTGATTTGGATAGCCCGACAGAGG
GCTTCGCATCGATTGCAGATGCCATTGAGGACATACGACAAGGAAAACTTGTGATTGTTG
TTGACGACGAATCAAGGGAAAATGAAGGAGATCTGATAATGGCTGCCAACTTGGTTACCC
CAGAGGCTATGGCTTTTATAGTAAGGCATGGGACAGGAATTGTTTGTGTCAGCATGAAAG
AAGATGATCTGGAAAGACTGAACCTTCCTTTGATGGTTACCACAAAAGAAAACGAGGAGA
AGCTATGCACTGCTTTCACTGTTACAGTGGATGCAAAAGAGGGCACAACTACTGGGGTAT
CTGCCAAGGACAGGGCAAAAACAGTCATGACTCTTGCATCTCCTGACTCTAAGCCTGAGG
ACTTCAACCGCCCTGGTCATATTTTCCCTTTGAAATACAGAGAAGGAGGTGTTCTGAAAC
GAGCTGGACACACCGAGGCATCTGTTGATCTTGCCATGCTGGCTGGATTACCTCCTGTTG
CTGTCCTTTGTGAGATTGTGGATGATGCAGATGGTTCCATGGCTCGCCTACCAAAGTTGC
GTGTCTTTGCTGAAAAGGAGAATTTGAAGATTATATCTATTGCTGACTTGATTAGGTATA
GGAGGAAACGAGACAGGCTAATTGAACGTGCTTCTGTTGCGCGCTTGCCTTTGAAATGGG
GCAATGTCCGTGCCTATTGCTACAAATCTGTTATCGATGGCATAGAGCATATTGCCATGG
TGAAAGGTGATATTGGCGATGGCCAAGACATTTTGGTGAGGGTGCACTCTGAGTGCCTCA
CAGGCGACATTTTTGGATCAGCGAGATGTGATTGTGGTGACCAGCTTGCAATGGCAATGG
AGATGATTGAGAAGGCTGGAAGGGGTGTATTAGTTTATCTCCGTGGACATGAAGGAAGGG
GTATTGGCCTGGGCCACAAGCTTCGTGCCTATAACTTACAGGATGATGGGCGTGATACTG
TGGAAGCTAATGAGGAACTTGGTCTTCCTGTGGACTCACGGGAATATGGGATTGGCGCAC
AGATATTACGGGATCTAGGAGTCCGTTCAATGAAGCTGATGACTAATAACCCTGCAAAAT
ATAGTGGTCTGAAGGGTTATGGACTGAGCATTGCGGGCAGGGTGCCCTTGATTACGCCAA
TTACCAGTGAGAACCGTAAGTACCTGGAGACCAAAAGAACAAAGATGGGACATGTATATG
GATTGGCTAATGTGCAGGCTAACCAACCAAGTGGCAGCCAGAGCACAGAAGAGAAGCATT
AGGCCCAACAAAGCACGGTCTCCATCCCAATTCCAGCTTGGTGGCACAAAGAGTGATATG
GTTTCTTCTTTTGGGGAGTTCCTGAAATCGTCTCCCCCGATATCTCTGTAGATTCTTTCG
CAAAGAAGGCGATATTTCAGTAGATTTGTTCTTCAATTGTAACTGTAGGTTTCAAGATGG
CTAATAATGAAATGCACGGAGTTTGTCGTCGATGCTGTAGTTGTCTGGTGTTGAGCTTTG
TCGCCTTGGTGTGGTTGTCCCGATGGAGTTGTGGCGCAGCCAAGATTTTGCAGCAGGATA
TTCCATGTACAAAAGAAATTTCTAATGCAAATAAGAAATATATTGGACCATAAGTCCATA
GCGTAATGGCTAACAAATCCATAGAAATAACTCTAGATTTGGTGTGGCTTTTCGCTGCCC
TTTTGCAGCTAAAAACCATAGAATGAGTGGTTTCGTCGAGGTGAAATGATAGTTATTTGA
GATGTTGGGCTTGTCACTGTGAATACATGCGAACTAACCCCCTACTCCAACGCGTAGTAT
CCTACCAAAGTAGTCAGTAGAAACATCAAACATTTTGTTGGGTGGAAAACCTGTACAGCC
TCTGCCTTTGTGAAGAGAAATTAGATTTTTTCGAGCCACCTGTGCTCGGCTGAATGATTT
CCCCCGTTGGTTTGCGATGCGATCTTGTGAGTTCGTTCGCTGAAGTTGAGAGAATGATCC
ACGCAAAGCTCTTCGTCATGTAAATTTTGTCAGCCGCAAGTTGGAACTCGTTTGCAATTT
CTGACTAAT