Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06898
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:51241681:51245486:-1 gene:SORBI_3004G163200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACCGCGCCCGCCCCACCGCCGCCGCCGCGATGCTGCTGGAGCCCAAGCTCGAGGAC
GAGGACGTGCCGCCGCTGCTGCAGCAGCTGGCGTCCCCGGGCCCCCCCTTCGTGTCCCTG
GACCAGCTGATGCCGGCGCCGGCGGCCGAGCCGCCGCGCCCGCTGGAGGCGCTGCTGCAG
GGCCCGCAGCTGCCGCCCTTCCTGTCCAAGACGTACGACCTGGTGAGCGAGCCGGCGCTG
GACGGGGTCATCTCCTGGGGCGCGGCCGGGAACAGCTTCGTCGTCTGGGACCCCTCCACC
TTCGCGCGCGACGTGCTGCCGCACAACTTCAAGCACAACAATTTCTCCAGCTTCGTCAGG
CAGCTCAACACCTATGGTTTCCGCAAGGTTCATGCTGACAGATGGGAGTTTGCTCACGAA
GATTTCCTGCGAGATAGCAAGCATCTGTTGAAGAGGATTGTCAGGCGCAGGTCCTCCCCA
ACAAAACAAAGCAGCATTCAGCCTGGTTCTTCTTCTGGAGAATCCATCCTGGACCCTGAG
CTCCACACGCTGAGAAGAGAGAAGAACACGCTGCTTGAAGAAGTGGCAAGGTTGAAACAG
GAACACCGCCAGACAATTGAGCACATGAGCACGCTGAATCACAGGCTGGAATCTGCAGAG
GACCGGCAGAGGCAGATGGTCTCTTTCCTGGCCAAGCTCCTTCAGAACCCGAGTTTCGTG
AGGCAGCTGAAGCTGCACAGGGAGAAGAAAGAGATTGACTCCACCAGGGTGAAAAGGAAG
TTTCTGAAGCATGTTCCTCATAGCATAGAGTCAGGTGAGTCCAGCTCACAGCATGCCGGA
GAGAGTGGTTCGCATTTCGCTGTGAGTTCTTCCATGGCTACAAGCCTGCACGACGACATC
ACAGAACTTCAGAATTTTCTCTTGGAAGACGATGACGTCAACTTTGGCATGGGTTCAGAA
AACATGGGGCTTGAAGGCATCGATGCACCAGAGGATATTGGAGAATTGATTCAGGGGTTC
GACACGCAAGAAGAACTTGAGCTGGGCAGTGGAGCTGAGCTACTGGAGATGCCTCCAGCT
TCTGGTCCTCTGGGTCAAGATCCCACAATCGGCAGGTCCAAGGGAAAGAATGTGCTGTGT
CCAGGTTTGGACGCTACCTCTTCTGAAGCCGACTGCCTCAGTCCATTGTCTGACAACATG
GGGTTGCTTTCAGGCACCATGCTAGGGGCAGCAGGCAGGATGATGGACGCTGATGATCAG
CAAGTGTGGGGCGTTGATGCCTCAGCAGCCCTGCAAAGCTCTTGCAGTGGCACTAGTCAA
CAAGCTTTCAGTAGCCATGCTAGTGATCCCTATCTGATGGACATTGCCAACAAGCCTGAG
AGATTCTGGGAGCTTGATTTCCAGGCACTGGATGAAACTGATCTGCAGCTGGACAAGTGT
GCTATTGATGACCCTGCTCTTCAGCAGCAGCCAAGTATGGAGAAGCCGTAG

Peptide Sequence

PEP ID

EES06898
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:51241681:51245486:-1 gene:SORBI_3004G163200 transcript:EES06898 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDRARPTAAAAMLLEPKLEDEDVPPLLQQLASPGPPFVSLDQLMPAPAAEPPRPLEALLQ
GPQLPPFLSKTYDLVSEPALDGVISWGAAGNSFVVWDPSTFARDVLPHNFKHNNFSSFVR
QLNTYGFRKVHADRWEFAHEDFLRDSKHLLKRIVRRRSSPTKQSSIQPGSSSGESILDPE
LHTLRREKNTLLEEVARLKQEHRQTIEHMSTLNHRLESAEDRQRQMVSFLAKLLQNPSFV
RQLKLHREKKEIDSTRVKRKFLKHVPHSIESGESSSQHAGESGSHFAVSSSMATSLHDDI
TELQNFLLEDDDVNFGMGSENMGLEGIDAPEDIGELIQGFDTQEELELGSGAELLEMPPA
SGPLGQDPTIGRSKGKNVLCPGLDATSSEADCLSPLSDNMGLLSGTMLGAAGRMMDADDQ
QVWGVDASAALQSSCSGTSQQAFSSHASDPYLMDIANKPERFWELDFQALDETDLQLDKC
AIDDPALQQQPSMEKP

Transcript Sequence

Transcript ID

EES06898
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:51241681:51245486:-1 gene:SORBI_3004G163200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTGACCCTGCCACTGCCACAGTGCCACGGCCCACGGCTACCAGACTCCACACGCCCCAC
CTGAACTCCGCAAGCAAAAATATCCCGGCCTCTCTTCGCCCCCAAGCAAACCCGCCGCCG
CCCGGCGCCCGCGGGTCGCCTGCGCTGCGCTTTCCTTCTTCCCGCCAAGATATTTTTCCG
GACGCTCTACCCTGCAGCTGTAGCGCGTGCGCGCACCGCCTTGCCCTGCGGTCCGCAGCC
GCGAGACCGTCCAGGCCCCGGCGGCCGGCGCCAAGTGGCCCGAATCCCCCGCGGGGCCCG
CCGCGATCACCCACCCAAAACCTCCCCCTCGGCTCGGGCATACACGGCCGTCTCTGAGCC
AGTCTCCCGGCAGCGGCAGCCAGCAGTCCCCGGGGCTGTCCACGCGGAGCGCCCGCCGAT
GGCCGGCCCCGGCCACAGTATGTCGGTTCCACCCCCACCCGAAGCCTATAAATTCCTCGC
CGCCCCGTCTCTCGCCGCCCATTTCCTCCGCCGCCTCCTCCTAGTCCTCAACCCCCGCGC
GCGTCGTCGTATGCCACCATGGACCGCGCCCGCCCCACCGCCGCCGCCGCGATGCTGCTG
GAGCCCAAGCTCGAGGACGAGGACGTGCCGCCGCTGCTGCAGCAGCTGGCGTCCCCGGGC
CCCCCCTTCGTGTCCCTGGACCAGCTGATGCCGGCGCCGGCGGCCGAGCCGCCGCGCCCG
CTGGAGGCGCTGCTGCAGGGCCCGCAGCTGCCGCCCTTCCTGTCCAAGACGTACGACCTG
GTGAGCGAGCCGGCGCTGGACGGGGTCATCTCCTGGGGCGCGGCCGGGAACAGCTTCGTC
GTCTGGGACCCCTCCACCTTCGCGCGCGACGTGCTGCCGCACAACTTCAAGCACAACAAT
TTCTCCAGCTTCGTCAGGCAGCTCAACACCTATGGTTTCCGCAAGGTTCATGCTGACAGA
TGGGAGTTTGCTCACGAAGATTTCCTGCGAGATAGCAAGCATCTGTTGAAGAGGATTGTC
AGGCGCAGGTCCTCCCCAACAAAACAAAGCAGCATTCAGCCTGGTTCTTCTTCTGGAGAA
TCCATCCTGGACCCTGAGCTCCACACGCTGAGAAGAGAGAAGAACACGCTGCTTGAAGAA
GTGGCAAGGTTGAAACAGGAACACCGCCAGACAATTGAGCACATGAGCACGCTGAATCAC
AGGCTGGAATCTGCAGAGGACCGGCAGAGGCAGATGGTCTCTTTCCTGGCCAAGCTCCTT
CAGAACCCGAGTTTCGTGAGGCAGCTGAAGCTGCACAGGGAGAAGAAAGAGATTGACTCC
ACCAGGGTGAAAAGGAAGTTTCTGAAGCATGTTCCTCATAGCATAGAGTCAGGTGAGTCC
AGCTCACAGCATGCCGGAGAGAGTGGTTCGCATTTCGCTGTGAGTTCTTCCATGGCTACA
AGCCTGCACGACGACATCACAGAACTTCAGAATTTTCTCTTGGAAGACGATGACGTCAAC
TTTGGCATGGGTTCAGAAAACATGGGGCTTGAAGGCATCGATGCACCAGAGGATATTGGA
GAATTGATTCAGGGGTTCGACACGCAAGAAGAACTTGAGCTGGGCAGTGGAGCTGAGCTA
CTGGAGATGCCTCCAGCTTCTGGTCCTCTGGGTCAAGATCCCACAATCGGCAGGTCCAAG
GGAAAGAATGTGCTGTGTCCAGGTTTGGACGCTACCTCTTCTGAAGCCGACTGCCTCAGT
CCATTGTCTGACAACATGGGGTTGCTTTCAGGCACCATGCTAGGGGCAGCAGGCAGGATG
ATGGACGCTGATGATCAGCAAGTGTGGGGCGTTGATGCCTCAGCAGCCCTGCAAAGCTCT
TGCAGTGGCACTAGTCAACAAGCTTTCAGTAGCCATGCTAGTGATCCCTATCTGATGGAC
ATTGCCAACAAGCCTGAGAGATTCTGGGAGCTTGATTTCCAGGCACTGGATGAAACTGAT
CTGCAGCTGGACAAGTGTGCTATTGATGACCCTGCTCTTCAGCAGCAGCCAAGTATGGAG
AAGCCGTAGATGAATTTCCGTGTGAGACAGACAATATGGTGATACTTTATCCACTGATGA
ATGCTACAATTAGCTTATGGACGTTGATGTAGTTATTTTGATATTTGGGAGCGAGGCTGA
TGAGCTCCTAGATACGCCCACTATGGCACTTAGTAGTAGCAGCAGTAGTAGTATGTTTTT
GTTTCCCATTCATTCACCCCTAGTGTTTTTGAATGGAAACTTTTATCCTATTGATTTGTT
CAGAGCAGCTGTTAACTGCTCTGGCCGATTCTTTTTGCTCCCATTTATTTTATTTTTGTT
TTTTCTTACTTGCGATTTGTGAATGTCTTGCAATGAGCAATGGAATTAAAAAAAGAAAGT
CATTCTCA