Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06877
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:50297677:50305300:-1 gene:SORBI_3004G158200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCCATCTCCCCACGCGAACGCACCGGAGGACACTATTACCCGCGCCCGCACAACCCT
AGCCCTAGTACCCAACATGGCAGCGACAGACGCCGCCACGGCCGCCGCTCCCCTCCGGCA
TCCGTCTCGCCACCTGGCGCCGCTGCGGCGGCCGGCGACGGTGGGGTCGGCTCGAGCTCC
CACCCAGTGGTTCCAGCTATTAGAGAATCTATTAATGCTCCCGAAAAGGTAGTTGGATTT
ATAATATCTGGGGAAGAGACAATTACTCAAGAGGTTGGCAGTATTGAAGAATGCCACTCT
TCAGAACAGGGGAATTTGGGTTTCCCTGTAGATAATTTTGGTTCAGTTGGGCCATATCCT
GAGAGACCTAAAATGGCGGGATCCCTTGAGGCTGACCATTTGGCTTCAGGTTCTACTGGA
CATCAGGGTAATGGGACTCAGATAGCTGCCAGGAAGAATCAGTCCGTGAATGCCAATCAC
CTCCTGAATTTCCAGTATGATCCTATTTCTCGGCCACAGCCCAGAGGCCCTAGAACATAT
CCTCCCAGAAGACAAAGGAAGATCAAACCTTACAACAAGGATCTGTTCCTCCAAGCAAAC
TATAAGTTTGTTGTGTTGGATACTGGGAATTACCAGATTGAATCAATGGATCCTGATAAG
ATGCTTCAGTGGGAAGATATTATCTGTGTAAGGTACTATAGCCCTTCTGAGGTACAATGC
CCTATTTGTTTGGAAAGCCCATTGTGCCCACAGATCACATCATGTGGACACATATATTGC
TTTCCATGCATTTTGCATTATCTAACGATGGGCAAAGAGGATTATAGAGGTGAATGCTGG
AAGAAGTGTCCTCTGTGTTTCATGATGGTATCAACAAAGGATTTGTATACAATACAAATT
ACTCAAGTCCAGAATTTCTGTGCTGGTGACGTTGCCACATTTACACTTCTGAGTCGTTCA
AGAAATTCACTCACTCCTTCCATTAAAATCTCCTCCAGTGAAAGTTCTACAGCAGATGAA
GATCCATATAATGTTTTCTCAAAGTTTATTGTGACATCTGACGTGGAGTTGTCTGTTCGA
GAGGCAAAATTGGATCTTAGTAATTGGTTGCATATGGCAGACTTAGGCCTTGTTGATGAC
TTGGAGAAACTTCCATATGTTTCTGCTGCTTTGGAGCAACTGGAAGAAAGGATGAAACAT
TGGATTGAGTACAGAAACTATGGTGGTAGCCCTCCATCAAAAGATAGCTTCTCTCCTGGA
TCTAGTTTCAAGTCTAGGAATTCTTTTGATGTGAATACTTCTCACCAGATCAGCGGCCGC
AAGATCTCTGTTTCAGATAGAGATATGGTCAGTGGTATTTCAGAACTCTCCATGTCTCCT
GAGTTGAGCACAAACTCTGGTAAAGGAACAATGTCTAAAGTAAATGAGAAATGTACCACC
ACCATTGATTCAAATGAACATGATCCATACATATTTTACCAGGTGTCAGATGGCCAACAC
CTAATTCTTCATCCACTAAACATGAGATGTCTTCTAAACCATTTTGGAGGTTCTGATATG
CTTCCACCTAGGATAACTGCAAAAATATTGGAGCTGGAAACTGTAACACAGTCTGAGGCT
ATAAGGAAGCGCTATCGGTTTTTGAGTCATTTCTCATTAACAACTACATTCCAGTTCTGT
GAAATTGACCTGAGTGATATAGTATCTCCTAGCTCATTGGCTCCATTCTTGGATGAAATC
AAGAAGCGTGAGAAACAAAGAAGACGAACCGCCAAGAAGGAAGAAAGTGAGAGAGCAAAG
GCAGAAGTTGCTGCTGCTGTGCAGGCATCAGCTATGCGGTTTGAGTATGCAAATTCCTCT
CAAAGTCACAACGATGTCATGTTCTCTCTGGATGACTTCGAAGCTCTGGGAAACAATGCT
GGGCCATCCACCAGTCCACGAGTCAGTGAAAGGAAGCTTTTCTCTGACGTAACACGCCTG
GGTTTTGCATCTGCTCAAGACTCACCTCCCCTAAGACTCGGAACTGGGGATGCCAATGGC
CAAAGTGAAAACTCGAGAGACCAAGGGCCGTTAGCGACACCTGCATTATCATTTGCCAGC
ATCATATCTTCCAGTAGAGCCGTGGCTGCAGCTGACAACTCGGAGATGCAGAAAGCAAAT
GGCACTGGGAAGAAGGGCAAGAAAGCAACTAGAGTGCTCTTGTCGACTGGTGGCGCCCGT
CGATACTGA

Peptide Sequence

PEP ID

EES06877
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:50297677:50305300:-1 gene:SORBI_3004G158200 transcript:EES06877 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSISPRERTGGHYYPRPHNPSPSTQHGSDRRRHGRRSPPASVSPPGAAAAAGDGGVGSSS
HPVVPAIRESINAPEKVVGFIISGEETITQEVGSIEECHSSEQGNLGFPVDNFGSVGPYP
ERPKMAGSLEADHLASGSTGHQGNGTQIAARKNQSVNANHLLNFQYDPISRPQPRGPRTY
PPRRQRKIKPYNKDLFLQANYKFVVLDTGNYQIESMDPDKMLQWEDIICVRYYSPSEVQC
PICLESPLCPQITSCGHIYCFPCILHYLTMGKEDYRGECWKKCPLCFMMVSTKDLYTIQI
TQVQNFCAGDVATFTLLSRSRNSLTPSIKISSSESSTADEDPYNVFSKFIVTSDVELSVR
EAKLDLSNWLHMADLGLVDDLEKLPYVSAALEQLEERMKHWIEYRNYGGSPPSKDSFSPG
SSFKSRNSFDVNTSHQISGRKISVSDRDMVSGISELSMSPELSTNSGKGTMSKVNEKCTT
TIDSNEHDPYIFYQVSDGQHLILHPLNMRCLLNHFGGSDMLPPRITAKILELETVTQSEA
IRKRYRFLSHFSLTTTFQFCEIDLSDIVSPSSLAPFLDEIKKREKQRRRTAKKEESERAK
AEVAAAVQASAMRFEYANSSQSHNDVMFSLDDFEALGNNAGPSTSPRVSERKLFSDVTRL
GFASAQDSPPLRLGTGDANGQSENSRDQGPLATPALSFASIISSSRAVAAADNSEMQKAN
GTGKKGKKATRVLLSTGGARRY

Transcript Sequence

Transcript ID

EES06877
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:50297677:50305300:-1 gene:SORBI_3004G158200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATTAATCCCACGCCACCCTGTCCCTTTCCCCGCGCCACCGCCCTCTCCGTCGCCGCCGAC
CGACCGAGCGCCGCTCACCCACCCCACGAGCTCCCGCGCGGGTTCATGTCCATCTCCCCA
CGCGAACGCACCGGAGGACACTATTACCCGCGCCCGCACAACCCTAGCCCTAGTACCCAA
CATGGCAGCGACAGACGCCGCCACGGCCGCCGCTCCCCTCCGGCATCCGTCTCGCCACCT
GGCGCCGCTGCGGCGGCCGGCGACGGTGGGGTCGGCTCGAGCTCCCACCCAGTGGTTCCA
GCTATTAGAGAATCTATTAATGCTCCCGAAAAGGTAGTTGGATTTATAATATCTGGGGAA
GAGACAATTACTCAAGAGGTTGGCAGTATTGAAGAATGCCACTCTTCAGAACAGGGGAAT
TTGGGTTTCCCTGTAGATAATTTTGGTTCAGTTGGGCCATATCCTGAGAGACCTAAAATG
GCGGGATCCCTTGAGGCTGACCATTTGGCTTCAGGTTCTACTGGACATCAGGGTAATGGG
ACTCAGATAGCTGCCAGGAAGAATCAGTCCGTGAATGCCAATCACCTCCTGAATTTCCAG
TATGATCCTATTTCTCGGCCACAGCCCAGAGGCCCTAGAACATATCCTCCCAGAAGACAA
AGGAAGATCAAACCTTACAACAAGGATCTGTTCCTCCAAGCAAACTATAAGTTTGTTGTG
TTGGATACTGGGAATTACCAGATTGAATCAATGGATCCTGATAAGATGCTTCAGTGGGAA
GATATTATCTGTGTAAGGTACTATAGCCCTTCTGAGGTACAATGCCCTATTTGTTTGGAA
AGCCCATTGTGCCCACAGATCACATCATGTGGACACATATATTGCTTTCCATGCATTTTG
CATTATCTAACGATGGGCAAAGAGGATTATAGAGGTGAATGCTGGAAGAAGTGTCCTCTG
TGTTTCATGATGGTATCAACAAAGGATTTGTATACAATACAAATTACTCAAGTCCAGAAT
TTCTGTGCTGGTGACGTTGCCACATTTACACTTCTGAGTCGTTCAAGAAATTCACTCACT
CCTTCCATTAAAATCTCCTCCAGTGAAAGTTCTACAGCAGATGAAGATCCATATAATGTT
TTCTCAAAGTTTATTGTGACATCTGACGTGGAGTTGTCTGTTCGAGAGGCAAAATTGGAT
CTTAGTAATTGGTTGCATATGGCAGACTTAGGCCTTGTTGATGACTTGGAGAAACTTCCA
TATGTTTCTGCTGCTTTGGAGCAACTGGAAGAAAGGATGAAACATTGGATTGAGTACAGA
AACTATGGTGGTAGCCCTCCATCAAAAGATAGCTTCTCTCCTGGATCTAGTTTCAAGTCT
AGGAATTCTTTTGATGTGAATACTTCTCACCAGATCAGCGGCCGCAAGATCTCTGTTTCA
GATAGAGATATGGTCAGTGGTATTTCAGAACTCTCCATGTCTCCTGAGTTGAGCACAAAC
TCTGGTAAAGGAACAATGTCTAAAGTAAATGAGAAATGTACCACCACCATTGATTCAAAT
GAACATGATCCATACATATTTTACCAGGTGTCAGATGGCCAACACCTAATTCTTCATCCA
CTAAACATGAGATGTCTTCTAAACCATTTTGGAGGTTCTGATATGCTTCCACCTAGGATA
ACTGCAAAAATATTGGAGCTGGAAACTGTAACACAGTCTGAGGCTATAAGGAAGCGCTAT
CGGTTTTTGAGTCATTTCTCATTAACAACTACATTCCAGTTCTGTGAAATTGACCTGAGT
GATATAGTATCTCCTAGCTCATTGGCTCCATTCTTGGATGAAATCAAGAAGCGTGAGAAA
CAAAGAAGACGAACCGCCAAGAAGGAAGAAAGTGAGAGAGCAAAGGCAGAAGTTGCTGCT
GCTGTGCAGGCATCAGCTATGCGGTTTGAGTATGCAAATTCCTCTCAAAGTCACAACGAT
GTCATGTTCTCTCTGGATGACTTCGAAGCTCTGGGAAACAATGCTGGGCCATCCACCAGT
CCACGAGTCAGTGAAAGGAAGCTTTTCTCTGACGTAACACGCCTGGGTTTTGCATCTGCT
CAAGACTCACCTCCCCTAAGACTCGGAACTGGGGATGCCAATGGCCAAAGTGAAAACTCG
AGAGACCAAGGGCCGTTAGCGACACCTGCATTATCATTTGCCAGCATCATATCTTCCAGT
AGAGCCGTGGCTGCAGCTGACAACTCGGAGATGCAGAAAGCAAATGGCACTGGGAAGAAG
GGCAAGAAAGCAACTAGAGTGCTCTTGTCGACTGGTGGCGCCCGTCGATACTGAAGGACT
AGATACATTGGAAACTTACAGTTTGGTTGTTTCCATATAGTACCGTAGCTCAAAAATGTG
TAAAGTGCATAACCTGGATTATGCTTGTAAGTTGTAACACTAAGCGGCAGTTGTTGTGTG
CCTTCTGCCTGCCCCTCTTCTGTAGGTGTGCTTGCGTTGTACCCGCATGCTGTCCCATGC
TTACCTGTCTGGAAACGAGCGCAGAGAGCCATATACCGTAATTAATTAATAATGATGGCG
CAACACTTCTTTTTTCCTGGAACGGC