Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06629
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:12492748:12496390:-1 gene:SORBI_3004G118700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGGGGAGCCAGAACGGGGGGCCGAGGCCTCGGCCGGTCAAAGCCGAGACCATCCAC
GGTCTTGCGCGCGCCGGCGACCTCGCCGGCGTCCAGAGGAAGCTGCGGGAGAACCCCGCC
CTCCTCAACGACAAGAATCCCGTGATGTGTCAAACACCACTTCATGTTGCTGCTGGCTAC
AATAATACAGAAATAGTCAAGTTCTTGCTTAACCAGCAAGGTACAGAAACAGTTGATCTG
GAGGCAAAGAACATGTATGGAGAGACTCCTCTGCATATGGCAGTGAAGAACAGCTCTTGC
GGATCAACAAATCTACTCCTTGAACATGGTGCACACATAGAAGCCAAAGCCAATAACGGC
ATGACACCATTGCATTTAGCAGTCTGGCATGCACTTCAAGCTGGAGACTGCAGCACGGTT
AGCGTGTTACTAAGCTACAACGCGGATTGCTTTGCAAAAGATGATGAAGGCAAAATGCCC
TTAAATCATATTCCAGGAGGAGCTGGTAGTGAGAAGCTGCTGAAACTCCTCACTCATCAT
ATGGAAGAGCAAAGAAAAAAGAAAGCTCTCATGTCATGCGTTGAAGGGCAAGCAATGTCA
GAGTTTGAAGAGGCAATATCACAAATTGTTGGATTGCAGGAGCTCAAAATGCAATTGCGC
CGATGGGCAAGGGGAATGCTTTTTGATGAGAAGCGACGGGCTATGGGCTTAGGGATTGCT
AGAAGGAGAGCTCCCCATATGGCATTTCTTGGCAATCCAGGAACTGGCAAAACTATGGTT
GCTCGAATTCTTGGAAAGCTCCTTCACATGGTTGGAATTCTCCCTACTGACAAAGTAACT
GAAGTTCAGCGAACTGATCTTGTTGGAGAATTCGTGGGGCATACTGGACCGAAGACTAGG
AGGAAGATACAAGACGCAGAGGGAGGTATTCTCTTCGTGGATGAAGCTTACAGGTTGATA
CCAATGCAAAAATCCGATGACAAGGATTATGGTTTAGAAGCCTTGGAGGAGATAATGTCT
GTAATGGACAGTGGCAAGATAGTTGTCATATTTGCTGGGTACTGTGATCCAATGAAGCGA
GTCATCACCTCGAATGATGGTTTCTGTAGGCGGGTCACAAAATTCTTCTATTTCGACGAT
TTCAGCACGACAGAACTAGCAGAGATCCTACATATGAAGATGATGAGCCCAAGTGAGAGT
AGCTTGCTTTATGGGTTTAAGCTGCACCCAAGCTGCAGCATTGAAGTCATTGGAGAGCTG
ATTGCCAGAGAGACCACTGAAGAGAGGCGGAAACAGATGAATGGAGGCCTTGTAGACACA
CTGCTCATCAATGCCCGTGAGAACCTGGATTCACGGCTTGATTTCAACTGCGACGACACT
GATACTATGATCACGATCATGTTGGAAGACCTGGAAGCAGGGCTTCGGCAGATTTCCAGA
CAACGGCAATTGCAGTGA

Peptide Sequence

PEP ID

EES06629
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:12492748:12496390:-1 gene:SORBI_3004G118700 transcript:EES06629 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPGSQNGGPRPRPVKAETIHGLARAGDLAGVQRKLRENPALLNDKNPVMCQTPLHVAAGY
NNTEIVKFLLNQQGTETVDLEAKNMYGETPLHMAVKNSSCGSTNLLLEHGAHIEAKANNG
MTPLHLAVWHALQAGDCSTVSVLLSYNADCFAKDDEGKMPLNHIPGGAGSEKLLKLLTHH
MEEQRKKKALMSCVEGQAMSEFEEAISQIVGLQELKMQLRRWARGMLFDEKRRAMGLGIA
RRRAPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTR
RKIQDAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYCDPMKR
VITSNDGFCRRVTKFFYFDDFSTTELAEILHMKMMSPSESSLLYGFKLHPSCSIEVIGEL
IARETTEERRKQMNGGLVDTLLINARENLDSRLDFNCDDTDTMITIMLEDLEAGLRQISR
QRQLQ

Transcript Sequence

Transcript ID

EES06629
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:12492748:12496390:-1 gene:SORBI_3004G118700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGGCCAATTACAGCGAAAGCACTGGTCCCGTCGCCCCCGTTCCTCTTGACGGCCTCGC
CGTCGCCTCCCTTTCTTCTTCCTCGACGGCTCCTCCTCACACTCTCACTCACGCGGAGAG
CGCTCGCGCGGGCGCACACGCGGAGGTGGAGGTTCACAGGAGGGGGAGGGAGGGGATGCC
GGGGAGCCAGAACGGGGGGCCGAGGCCTCGGCCGGTCAAAGCCGAGACCATCCACGGTCT
TGCGCGCGCCGGCGACCTCGCCGGCGTCCAGAGGAAGCTGCGGGAGAACCCCGCCCTCCT
CAACGACAAGAATCCCGTGATGTGTCAAACACCACTTCATGTTGCTGCTGGCTACAATAA
TACAGAAATAGTCAAGTTCTTGCTTAACCAGCAAGGTACAGAAACAGTTGATCTGGAGGC
AAAGAACATGTATGGAGAGACTCCTCTGCATATGGCAGTGAAGAACAGCTCTTGCGGATC
AACAAATCTACTCCTTGAACATGGTGCACACATAGAAGCCAAAGCCAATAACGGCATGAC
ACCATTGCATTTAGCAGTCTGGCATGCACTTCAAGCTGGAGACTGCAGCACGGTTAGCGT
GTTACTAAGCTACAACGCGGATTGCTTTGCAAAAGATGATGAAGGCAAAATGCCCTTAAA
TCATATTCCAGGAGGAGCTGGTAGTGAGAAGCTGCTGAAACTCCTCACTCATCATATGGA
AGAGCAAAGAAAAAAGAAAGCTCTCATGTCATGCGTTGAAGGGCAAGCAATGTCAGAGTT
TGAAGAGGCAATATCACAAATTGTTGGATTGCAGGAGCTCAAAATGCAATTGCGCCGATG
GGCAAGGGGAATGCTTTTTGATGAGAAGCGACGGGCTATGGGCTTAGGGATTGCTAGAAG
GAGAGCTCCCCATATGGCATTTCTTGGCAATCCAGGAACTGGCAAAACTATGGTTGCTCG
AATTCTTGGAAAGCTCCTTCACATGGTTGGAATTCTCCCTACTGACAAAGTAACTGAAGT
TCAGCGAACTGATCTTGTTGGAGAATTCGTGGGGCATACTGGACCGAAGACTAGGAGGAA
GATACAAGACGCAGAGGGAGGTATTCTCTTCGTGGATGAAGCTTACAGGTTGATACCAAT
GCAAAAATCCGATGACAAGGATTATGGTTTAGAAGCCTTGGAGGAGATAATGTCTGTAAT
GGACAGTGGCAAGATAGTTGTCATATTTGCTGGGTACTGTGATCCAATGAAGCGAGTCAT
CACCTCGAATGATGGTTTCTGTAGGCGGGTCACAAAATTCTTCTATTTCGACGATTTCAG
CACGACAGAACTAGCAGAGATCCTACATATGAAGATGATGAGCCCAAGTGAGAGTAGCTT
GCTTTATGGGTTTAAGCTGCACCCAAGCTGCAGCATTGAAGTCATTGGAGAGCTGATTGC
CAGAGAGACCACTGAAGAGAGGCGGAAACAGATGAATGGAGGCCTTGTAGACACACTGCT
CATCAATGCCCGTGAGAACCTGGATTCACGGCTTGATTTCAACTGCGACGACACTGATAC
TATGATCACGATCATGTTGGAAGACCTGGAAGCAGGGCTTCGGCAGATTTCCAGACAACG
GCAATTGCAGTGACATGTAAATTCAGGAGAATTTTTCTTGATCATCTCTTGCTTGTCAAC
AAAGACAGTTATGGCCGTACAATGACAGGGTCTCATCCATAAATGCTTTTGGCTATTCTT
TCTGTTGTATCTAGTCATTGCTAGATTGATGCCGTCCAACGATAGCAGTGTAGTGGTAAA
ATGCATGTAGTTCCCTGAATTCCTATGTTATTCCAGATGAGGTTTATACATATAAATAAA
TATAACCTGTGTATATACAATTATACATTCATGCCCTAACAATCAGTGTCAGAGGTCCGG
TGCTT