Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06580
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:10493842:10495822:-1 gene:SORBI_3004G108800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAAATCAAGCAACAATATTTATCGATCATCTCACTGCCAATTCATCGCTGCTGAAA
GCAGTTTTCTTCCCAGTCCTAGTCCCTGTCCTCCTGCTCTTCGTCCTGCTACGCTACTTC
TCTACAGGAGCAACAACGCTTAAAAACAAGCAACGAAAGAAGCTGCCTCCGTCACCTCCG
GCACTGCCGCTGATCGGGCACCTTCACCTCGTCGGCGCGCACCCGCATGTCTCTATGCGG
GGCCTCGCCGCCCGGCACGGCGGCGAGGACATCATGCTGCTCCGCCTCGGCACGGTCCCG
ACGCTTGTGGCGTCGTCCCCGCGCGCCGCTCAGGCGGTGCTGCGCACGCACGACCAGTCG
CTAGCCTCCAGGCCCCGCTCCATCTTCGGCGACATCCTCGGGTACGGGCCGTCGGACGTC
GGGTTCGCGCCCTACGGCGACGGGTGGCGGCAGGCCAAGAAGCTGGTCACCACGCACCTG
CTCAACACCAAGAAGGTGCAGTCCTACCGCGCCGCCCGCGAGGAGGAGGTGGGAGTGGCT
GTAGGCGACCTCCGCCGCGCAGCCATGGCAGGCGCGGCCGTGGACATGAGCGAGCTCCTG
AGCTCGTTCACGACCAACATGGTGAGCCGCGCCGTGGTGGGGCGGTCGTTCAGGGTGGAC
GGCATGGACAAGGTGTTCAAGGAGGTGATGGACGCGAGCATGGCCGTGCTTGGGGGCTTC
AGCCTGGAGAACTTCTATCCTGGCCTGGCCAATGTGGCCGGCGGCGTGCTCATGTGGCCG
GGGCGCCGCAAGGCTGAGAGACTCAGGGACCGGTGGGATGAGGTGCTAGATAAGGTGATC
GACCAGCACGCGAGCGTGGCGGCGGCAGGTGGTGCACCGGCACACCTCGAGAGTGATTTT
ACCCATGTGTTGCTATCGGTGCAAGAGGAGTACGGGCTCACCAGAGACGGCATCAAAGGA
ATCTTGGCTGATATGTTTGCAGCCGGCACAGACACAGCATACTTGGTACTAGAATTCACC
ATGGCTGAACTGATGCTGCACCAAGATGTTATGGCAAGGCTAAAGGCAGAGGTGAGAAGC
AGCAGCATGCCTAATAAGGACCACCAACAAGTCATGACAGAAGAGAACCTCACCGGAATG
CCATATCTAAAAGCTGTCATCAAAGAAACGCTCCGTCTGCACCCGCCATCGCCGCTCCTC
CTCCCACATCAGTCACTAGAGCAGTGCACCATCGATGGCTACGTCGTTCCTGCTGGCACC
ACCGTGTTTGTCAATGTCTGGGCAATCGGCCGCGACCCGAGGTCATGGGGCGATGCTGCA
GAGGAATTCATGCCGGAGAGGTTCATCAACAAGGGGGACACAGAGGGTGTCGATTTTAGA
GGAATTGACTTCCAGTTTCTGCCATTTGGGTCGGGACGAAGGATGTGTCCTGGCGTGAAT
TTCGCCCTGGCCAACGTTGAAATCATGCTGGCAAATCTTGTATGTCATTTTGATTGGGAG
ATGACGGAAGGAGCGAATGAGATTGACATGACAGAGGTGTTTGGATTAACAGTGCACCGA
AAAGAGAAGCTCATTCTCACTCCAAGGTTACAATCTTGTGTTGCTCAATCATTGGAGGGC
TAG

Peptide Sequence

PEP ID

EES06580
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:10493842:10495822:-1 gene:SORBI_3004G108800 transcript:EES06580 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MANQATIFIDHLTANSSLLKAVFFPVLVPVLLLFVLLRYFSTGATTLKNKQRKKLPPSPP
ALPLIGHLHLVGAHPHVSMRGLAARHGGEDIMLLRLGTVPTLVASSPRAAQAVLRTHDQS
LASRPRSIFGDILGYGPSDVGFAPYGDGWRQAKKLVTTHLLNTKKVQSYRAAREEEVGVA
VGDLRRAAMAGAAVDMSELLSSFTTNMVSRAVVGRSFRVDGMDKVFKEVMDASMAVLGGF
SLENFYPGLANVAGGVLMWPGRRKAERLRDRWDEVLDKVIDQHASVAAAGGAPAHLESDF
THVLLSVQEEYGLTRDGIKGILADMFAAGTDTAYLVLEFTMAELMLHQDVMARLKAEVRS
SSMPNKDHQQVMTEENLTGMPYLKAVIKETLRLHPPSPLLLPHQSLEQCTIDGYVVPAGT
TVFVNVWAIGRDPRSWGDAAEEFMPERFINKGDTEGVDFRGIDFQFLPFGSGRRMCPGVN
FALANVEIMLANLVCHFDWEMTEGANEIDMTEVFGLTVHRKEKLILTPRLQSCVAQSLEG

Transcript Sequence

Transcript ID

EES06580
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:10493842:10495822:-1 gene:SORBI_3004G108800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCATCTCAGTTACCACACCCGGCCGGAGAACTTTTGAGCTCAACTGGCCATCGATCATGG
CAAATCAAGCAACAATATTTATCGATCATCTCACTGCCAATTCATCGCTGCTGAAAGCAG
TTTTCTTCCCAGTCCTAGTCCCTGTCCTCCTGCTCTTCGTCCTGCTACGCTACTTCTCTA
CAGGAGCAACAACGCTTAAAAACAAGCAACGAAAGAAGCTGCCTCCGTCACCTCCGGCAC
TGCCGCTGATCGGGCACCTTCACCTCGTCGGCGCGCACCCGCATGTCTCTATGCGGGGCC
TCGCCGCCCGGCACGGCGGCGAGGACATCATGCTGCTCCGCCTCGGCACGGTCCCGACGC
TTGTGGCGTCGTCCCCGCGCGCCGCTCAGGCGGTGCTGCGCACGCACGACCAGTCGCTAG
CCTCCAGGCCCCGCTCCATCTTCGGCGACATCCTCGGGTACGGGCCGTCGGACGTCGGGT
TCGCGCCCTACGGCGACGGGTGGCGGCAGGCCAAGAAGCTGGTCACCACGCACCTGCTCA
ACACCAAGAAGGTGCAGTCCTACCGCGCCGCCCGCGAGGAGGAGGTGGGAGTGGCTGTAG
GCGACCTCCGCCGCGCAGCCATGGCAGGCGCGGCCGTGGACATGAGCGAGCTCCTGAGCT
CGTTCACGACCAACATGGTGAGCCGCGCCGTGGTGGGGCGGTCGTTCAGGGTGGACGGCA
TGGACAAGGTGTTCAAGGAGGTGATGGACGCGAGCATGGCCGTGCTTGGGGGCTTCAGCC
TGGAGAACTTCTATCCTGGCCTGGCCAATGTGGCCGGCGGCGTGCTCATGTGGCCGGGGC
GCCGCAAGGCTGAGAGACTCAGGGACCGGTGGGATGAGGTGCTAGATAAGGTGATCGACC
AGCACGCGAGCGTGGCGGCGGCAGGTGGTGCACCGGCACACCTCGAGAGTGATTTTACCC
ATGTGTTGCTATCGGTGCAAGAGGAGTACGGGCTCACCAGAGACGGCATCAAAGGAATCT
TGGCTGATATGTTTGCAGCCGGCACAGACACAGCATACTTGGTACTAGAATTCACCATGG
CTGAACTGATGCTGCACCAAGATGTTATGGCAAGGCTAAAGGCAGAGGTGAGAAGCAGCA
GCATGCCTAATAAGGACCACCAACAAGTCATGACAGAAGAGAACCTCACCGGAATGCCAT
ATCTAAAAGCTGTCATCAAAGAAACGCTCCGTCTGCACCCGCCATCGCCGCTCCTCCTCC
CACATCAGTCACTAGAGCAGTGCACCATCGATGGCTACGTCGTTCCTGCTGGCACCACCG
TGTTTGTCAATGTCTGGGCAATCGGCCGCGACCCGAGGTCATGGGGCGATGCTGCAGAGG
AATTCATGCCGGAGAGGTTCATCAACAAGGGGGACACAGAGGGTGTCGATTTTAGAGGAA
TTGACTTCCAGTTTCTGCCATTTGGGTCGGGACGAAGGATGTGTCCTGGCGTGAATTTCG
CCCTGGCCAACGTTGAAATCATGCTGGCAAATCTTGTATGTCATTTTGATTGGGAGATGA
CGGAAGGAGCGAATGAGATTGACATGACAGAGGTGTTTGGATTAACAGTGCACCGAAAAG
AGAAGCTCATTCTCACTCCAAGGTTACAATCTTGTGTTGCTCAATCATTGGAGGGCTAGG
TCAACCAGAAGAATAAAAATGGTGATATCTACGGAGTACACGCGTACTTCCTGTGTACTA
TAATAAAGTGATGGTTTATGCAAAATATGCATGTGCGAT