Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06399
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:5623629:5627232:-1 gene:SORBI_3004G069000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCCCTCTCCTCCACCTCCTCGCCGGCGGCGGGGGCGGCCGCCGCCGCCGCAGTCCGC
ACCGCTTCGCCGCCTCTCCGCGCCGCCACCCAAGTTTTGTTCAGGCAGAAGCTGGGCTTT
CTGGCGGCATTCCAGGCTCAACGTGTGAAATGCTCCCCTCATTTGATCAGATCTATTGTA
AAAAGTTCTAGATTAGATATCAATGACGGTGACAATGGAACAACTGAGCCCGCGAGAGAA
CTATTGGAGCGTCTGTTTGCTAAGACAAAGAGTCTAGATCCAGGTGCTTCTCAGGATAGG
GAGCTGAGCATGAGCATTGAGGTCCTGAAGACTGAATTTGAGGCTGCCTTATCAATCCTA
AGGAAGAAAGAGAAGGATCTTCGTGATGCGGAGAAGAAAGTCTCTGTGGATAGGTCAAGG
TTGAACCAGACCAAGCAGGACCTCGATCAGAGGGAGGAAGACATCATCAAAGCATATTCG
AGGCAACATGAAATGGAGAAAGCACTGATGAAGGCGAGTAGGGATTTGACTCTACAAGTC
CGACAGATCAATAATCTCAAGGTTCTGGTCGAGGAACAAGACAAAAAAATTGTTAGTTCA
CAAGATGCACTTTCTAAGAAGGTTATTGAAGTGGACAAGCTTAAACAAGAGATGCTGAAG
AAGAGTGATGAAGCAGCCTTGCTGCGTTCAGAGATCGAATCCAAGGAACAAGAGCTTCTT
GTAGCTAATCAGGCCATTGCACGTCAAGAAGCAACAGTTAGGGAGCTTCAAAGTGAAATT
AAAAGAAAGGAAACTGATATTGAGAGATTAAATGATTTGACGAAAGCTAATGAAGAGAAA
CTGAAAGTTGCAGAACAGGATCTTGAGAAGCAGAATTCAGGATGGATTGCAGCACAGCAA
GAGTTAAAGGAACTGGCGCAAATGGCATCCAAGGATAAGGATAATATCAAGAATACAATC
AGTGACTTCAAACGGGTGAGGTCTTTGCTAGATGCTGTGCGTTCTGAACTAATAGCTTCG
AAAGAGGCTTTCACCTTCTCACGCAAGCAAGTCGAAGATCAAGCAGCACAGTTGAGTAAC
AAAGTCCAGGAACTCACAGACCAAAAGGCACTGATTATTTCTTATACCCGGAATTTGGAA
GCTGCTCAGCTGGAGATTCGAGGAAAGACAACGGAGCTCAATGCTGCACAATCTCGCTGT
AGCGAACTTGAATCTCAGTTACTTGAGGAAACAAAGAAGGTTGAGTCGCTAGAGGGTATG
TTAACCAAAGAAAGGGAGAGCTTGGAACTGAAAACTAAGGAAGTAGACTTGCTTCAAGAG
GAGCTAGTTCAGAAGGAGAAGGATTACTTCAATTCACAAAAGCTTGTTGAAACAAAAGAG
ACTGAGTTGTTAGAGGCCAGACATGAAGTCGAAGATATGAAATTGAAGGTGGATTCCATA
CAATTTGCTGTTCAAGAGAAGGATTTGGAGCTTCTGGAGACACAAAGAAAACTTGATGAA
GTTAACAGTGAGGTTGTTGAACTTCAGCAGCTGATAAATAGCAAGGAGGATCAACTGGTT
CAAGTTAGAACTGAATTACAGGATAAAGAGCACTGCATACAATTAATGCAAGATGAATTG
GATAAGATGAGATTAGGACGCTCACAAGCTCATTCTGTGGTGCAAAAGATAGTTGAGCTT
ACTGGCAATCTTATAGGTTCTGTCGAAAGTGAAGAATTGGACATTTATAACTTGCTGGAT
GATGAAATTTTAAGCACAAGTACAGCACTTGAGTCCAATTTGCATAAACATAGCCAATTG
AAGGCTGACATAGACATGTTAAAAGAATCCTTACGAGAAAAGGACATGGATCTGAGTGCT
GCTTATAAAGCGCTTGATGCCAAAGATCGAGAGTTGAAGGCAGTAGTTGGAAGGTTAGAT
GTCAGGGACAAGGAACTAGACAAGTTGCAAGAGTTATCCATAGACCCCTATGACATCAGG
AGACTGTCTAGCGCTGCTGATGAGGCAACCAAAGACAACATTGTGGAAGAATTGGAGCTC
CAAAAGCATGAAATAGAATCTGTGGAGGTTGAGGCACTAGCTGCTAGTACTATGTTGAAG
AAGCTTGCGAATGTGACCAAGGAATTCTTGAGAAATGGTAGAACTGATTCTGGTACCAAT
TTGGTAGCATCTAAAAATTCAAACATTAGTGAAGGTGCTTCTAAAATGGGACCACAAAGG
AAAATTAATGTGATTCTTGAAGCTAAAAAGGAGATCGTTGGGCTATTTTCTTTGACAGAA
GAGCTCGTTGCTGGTGCTCAAATGAAGGATGCTGAGGAACCATAG

Peptide Sequence

PEP ID

EES06399
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:5623629:5627232:-1 gene:SORBI_3004G069000 transcript:EES06399 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPLSSTSSPAAGAAAAAAVRTASPPLRAATQVLFRQKLGFLAAFQAQRVKCSPHLIRSIV
KSSRLDINDGDNGTTEPARELLERLFAKTKSLDPGASQDRELSMSIEVLKTEFEAALSIL
RKKEKDLRDAEKKVSVDRSRLNQTKQDLDQREEDIIKAYSRQHEMEKALMKASRDLTLQV
RQINNLKVLVEEQDKKIVSSQDALSKKVIEVDKLKQEMLKKSDEAALLRSEIESKEQELL
VANQAIARQEATVRELQSEIKRKETDIERLNDLTKANEEKLKVAEQDLEKQNSGWIAAQQ
ELKELAQMASKDKDNIKNTISDFKRVRSLLDAVRSELIASKEAFTFSRKQVEDQAAQLSN
KVQELTDQKALIISYTRNLEAAQLEIRGKTTELNAAQSRCSELESQLLEETKKVESLEGM
LTKERESLELKTKEVDLLQEELVQKEKDYFNSQKLVETKETELLEARHEVEDMKLKVDSI
QFAVQEKDLELLETQRKLDEVNSEVVELQQLINSKEDQLVQVRTELQDKEHCIQLMQDEL
DKMRLGRSQAHSVVQKIVELTGNLIGSVESEELDIYNLLDDEILSTSTALESNLHKHSQL
KADIDMLKESLREKDMDLSAAYKALDAKDRELKAVVGRLDVRDKELDKLQELSIDPYDIR
RLSSAADEATKDNIVEELELQKHEIESVEVEALAASTMLKKLANVTKEFLRNGRTDSGTN
LVASKNSNISEGASKMGPQRKINVILEAKKEIVGLFSLTEELVAGAQMKDAEEP

Transcript Sequence

Transcript ID

EES06399
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:5623629:5627232:-1 gene:SORBI_3004G069000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACACAAGTCTCGTGCTCCTCGCGTGATCGCTTCATCCACGCTGCGCTGGCGCTGTGCAC
TCCACAAGCGGCCAGGAGGCAGGAGCTCCCCCGGTTCCACCACCTCATCCCTCTGCAGCC
GCCGCTCTCTCCTGTCGCCTCCTCGCCCGCAGTCCGCGCGCGCGCGCGTGTCGCCACCCG
TCTGGTCGCGCCCGGGCGGCCACGATCCCCTCCCCCCATGTTCCGCGGCCATGCCCCTCT
CCTCCACCTCCTCGCCGGCGGCGGGGGCGGCCGCCGCCGCCGCAGTCCGCACCGCTTCGC
CGCCTCTCCGCGCCGCCACCCAAGTTTTGTTCAGGCAGAAGCTGGGCTTTCTGGCGGCAT
TCCAGGCTCAACGTGTGAAATGCTCCCCTCATTTGATCAGATCTATTGTAAAAAGTTCTA
GATTAGATATCAATGACGGTGACAATGGAACAACTGAGCCCGCGAGAGAACTATTGGAGC
GTCTGTTTGCTAAGACAAAGAGTCTAGATCCAGGTGCTTCTCAGGATAGGGAGCTGAGCA
TGAGCATTGAGGTCCTGAAGACTGAATTTGAGGCTGCCTTATCAATCCTAAGGAAGAAAG
AGAAGGATCTTCGTGATGCGGAGAAGAAAGTCTCTGTGGATAGGTCAAGGTTGAACCAGA
CCAAGCAGGACCTCGATCAGAGGGAGGAAGACATCATCAAAGCATATTCGAGGCAACATG
AAATGGAGAAAGCACTGATGAAGGCGAGTAGGGATTTGACTCTACAAGTCCGACAGATCA
ATAATCTCAAGGTTCTGGTCGAGGAACAAGACAAAAAAATTGTTAGTTCACAAGATGCAC
TTTCTAAGAAGGTTATTGAAGTGGACAAGCTTAAACAAGAGATGCTGAAGAAGAGTGATG
AAGCAGCCTTGCTGCGTTCAGAGATCGAATCCAAGGAACAAGAGCTTCTTGTAGCTAATC
AGGCCATTGCACGTCAAGAAGCAACAGTTAGGGAGCTTCAAAGTGAAATTAAAAGAAAGG
AAACTGATATTGAGAGATTAAATGATTTGACGAAAGCTAATGAAGAGAAACTGAAAGTTG
CAGAACAGGATCTTGAGAAGCAGAATTCAGGATGGATTGCAGCACAGCAAGAGTTAAAGG
AACTGGCGCAAATGGCATCCAAGGATAAGGATAATATCAAGAATACAATCAGTGACTTCA
AACGGGTGAGGTCTTTGCTAGATGCTGTGCGTTCTGAACTAATAGCTTCGAAAGAGGCTT
TCACCTTCTCACGCAAGCAAGTCGAAGATCAAGCAGCACAGTTGAGTAACAAAGTCCAGG
AACTCACAGACCAAAAGGCACTGATTATTTCTTATACCCGGAATTTGGAAGCTGCTCAGC
TGGAGATTCGAGGAAAGACAACGGAGCTCAATGCTGCACAATCTCGCTGTAGCGAACTTG
AATCTCAGTTACTTGAGGAAACAAAGAAGGTTGAGTCGCTAGAGGGTATGTTAACCAAAG
AAAGGGAGAGCTTGGAACTGAAAACTAAGGAAGTAGACTTGCTTCAAGAGGAGCTAGTTC
AGAAGGAGAAGGATTACTTCAATTCACAAAAGCTTGTTGAAACAAAAGAGACTGAGTTGT
TAGAGGCCAGACATGAAGTCGAAGATATGAAATTGAAGGTGGATTCCATACAATTTGCTG
TTCAAGAGAAGGATTTGGAGCTTCTGGAGACACAAAGAAAACTTGATGAAGTTAACAGTG
AGGTTGTTGAACTTCAGCAGCTGATAAATAGCAAGGAGGATCAACTGGTTCAAGTTAGAA
CTGAATTACAGGATAAAGAGCACTGCATACAATTAATGCAAGATGAATTGGATAAGATGA
GATTAGGACGCTCACAAGCTCATTCTGTGGTGCAAAAGATAGTTGAGCTTACTGGCAATC
TTATAGGTTCTGTCGAAAGTGAAGAATTGGACATTTATAACTTGCTGGATGATGAAATTT
TAAGCACAAGTACAGCACTTGAGTCCAATTTGCATAAACATAGCCAATTGAAGGCTGACA
TAGACATGTTAAAAGAATCCTTACGAGAAAAGGACATGGATCTGAGTGCTGCTTATAAAG
CGCTTGATGCCAAAGATCGAGAGTTGAAGGCAGTAGTTGGAAGGTTAGATGTCAGGGACA
AGGAACTAGACAAGTTGCAAGAGTTATCCATAGACCCCTATGACATCAGGAGACTGTCTA
GCGCTGCTGATGAGGCAACCAAAGACAACATTGTGGAAGAATTGGAGCTCCAAAAGCATG
AAATAGAATCTGTGGAGGTTGAGGCACTAGCTGCTAGTACTATGTTGAAGAAGCTTGCGA
ATGTGACCAAGGAATTCTTGAGAAATGGTAGAACTGATTCTGGTACCAATTTGGTAGCAT
CTAAAAATTCAAACATTAGTGAAGGTGCTTCTAAAATGGGACCACAAAGGAAAATTAATG
TGATTCTTGAAGCTAAAAAGGAGATCGTTGGGCTATTTTCTTTGACAGAAGAGCTCGTTG
CTGGTGCTCAAATGAAGGATGCTGAGGAACCATAGCGTCATAACTGAACATATGTCTGCA
TCATGCATGAATATTATGCATGTCAATTGGAATGATGCAGCTGAAATTGTTACCTTTTTT
TTTTTTCCTTTTGAGGCTCAGATTTCTTTATATTCTTTTGGTTCATGGATGGGGCATCAC
CAAAAGGTAAAAAAAGGAGATTTTTCAGCTTTGGTTAAAAGGATGATGGTTGTGTTGCTA
GATACAAATATTCTTTTTTTTTTCCTTTTTGAGTGCTTGAAGAAGTATATCATCAGCCGT
CTATTGTATTATGGATCATTACTGTCAGCAGCAAAGAAAGAGTACAGAGGTTAAAATGTC
TTCGCCTACCTGGTCTGTTATGTTGGTGTGGATTCTTTTTAACCTCATGTATGTTTCTCA
ATTGTAGCACACTTGCTGATTTTTTTTTCACGTGTGTTTTCTGAATTATTGTCATTTGTC
AAATTGGTATGGGAGTGCAGAGAGTATGTTCAATGTCAAACCCTGGAGACGGATCCAAGT
GGTGTAGCTCAAAATCTCTGCCCCTAAAGTCAACATGCCTATCCACATGGGACATGGCTC
TGGTTTGAACAACTCAGCATCGTTCCCATATACTGATCCCTGTGGATCACACAAACATTC
ACCAATACAGTATATACCATGATCA