Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06356
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:4826608:4830172:-1 gene:SORBI_3004G060400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGTCGTGGCGCAAGGCCTACGGCGCCCTCAAGGACTCCACCACGGTTGGCCTCGCC
AAGGTCAACAGCGAATTCAAGGAATTGGATATTGCAATTGTGAAGGCAACCAACCATGTC
GAATGCCCTCCCAAGGAACGGCACGTTAGAAAAATATTGCTGGCAACCTCAGCAAATCGC
CCTCGCGCAGACGTCTCGTACTGCATGTATGCATTGTCAAGGAGATTGTCCAAGACAAAG
AACTGGATAGTTGCCCTCAAGACATTGATAGTGGTACATAGGCTTCTGAGAGAGGGTGAT
CCCACATTCAAGGAAGAATTCCTGGCCTACTCAAGCAGGGGGAACATTTTGTATATAGCC
AATTTCAAGGATGACTCGAGCCAATCAGCTTGGGATTGTTCCGCATGGGTTCGCACCTAT
GCATTCTTCCTGGAGGAACGGCTCGAGTGCTTTAGGGTTCTCAAATACGACATCGAAACT
GAGCGTCTCGTGAGATATCCCCAGACTTCTAGCAAGGCACATAGTAAAACCAGGAACCTA
CCTAGCCCAGAACTTTTGGAGCAGTTGCCTGCACTGCAGCAGCTGCTTTTCAGGGTTGTA
GGCGTCCAGCCTGAAGGTGCTGCCTGCTCAAATTACCTTATTCAGTATGCACTAGCCCTG
GTTCTGAAGGAGAGCTTTAAGATCTACTGTTCGATTAATGATGGCATCATCAATCTCGTT
GATATGTTCTTCGATATGCCAAAGTATGAAGCAATCAACGCTCTGGCAATTTACAAACGA
GCTGGCCTGCAGGCAGAAAACCTTGCCGAGTTCTATGACTTCTGCAAACAACTTGAGCTT
GCCAGGACATTCCAGTTTCCTACTCTCAGGCAGCCACCTGCATCGTTTCTTGCAACAATG
GAAGAGTACATCAGAGAAGCACCCCGACCCTCAATCAAGAGTGAGGAGAGCGAGGAGCCG
AAGCTACTGACCTATGACCAAGAAGCTCCAGAGGAACCCGAAAATCCAGTGGAAGAGGAG
AAAGAAGAACCTGAGCAAGAACCAGAACCTCAGCCTGTGCCTGATCCAGAACCCCACCCA
CAGCAAACAACTGGAGATCTACTAAACCTGGATGCAGAGGTGAATCCTTCAGTTGCAGAA
CTCGAAGAAAGCAATGCATTGGCGCTTGCTATTATAGCACCAGGTGACTGCAAGGCGTCA
GTATCTCAAAGTATGTTTGATGTCAACTCGTCTGGGTGGGAGCTGGCACTGGTCACTGCT
CCAAGCACCCATACAAGTCAAGCAGTTCAGACCAACTTGGCTGGAGGCTTTGACAAGCTG
TTACTTGACAGCCTCTACGAAGACGGGGCAAGGAGGCAGCAGATCGCCAGTGTGACCTAC
ACAGGTAGCCTAGGAGCAGCCAACCCTTTCAGCGTCAATGGCAACGATCCGTTCGCCATG
TCCAGCAGCTTCGCACCACCGGCTAATGTGCAGTTGGCACTGATGACTCAAAACCAACAG
CAGTACTACCAGGCGCAGCAGTATTTCCAGCCACAGCAGCAGTATTTTCAGCAGCATCAA
CAGACGTCGGCAATGCCAACACAAAACATGTACCACCACCAGTATCAGTACTCTGTGCCT
CCATCTGGAGCTCCAAACCCGTTTGGTGATCCTTTCAGTGACCTTGCCCCAATGGGTGCT
CCTGGAAAACAGAGCAACTCAGTTTTTCTCTGA

Peptide Sequence

PEP ID

EES06356
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:4826608:4830172:-1 gene:SORBI_3004G060400 transcript:EES06356 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGSWRKAYGALKDSTTVGLAKVNSEFKELDIAIVKATNHVECPPKERHVRKILLATSANR
PRADVSYCMYALSRRLSKTKNWIVALKTLIVVHRLLREGDPTFKEEFLAYSSRGNILYIA
NFKDDSSQSAWDCSAWVRTYAFFLEERLECFRVLKYDIETERLVRYPQTSSKAHSKTRNL
PSPELLEQLPALQQLLFRVVGVQPEGAACSNYLIQYALALVLKESFKIYCSINDGIINLV
DMFFDMPKYEAINALAIYKRAGLQAENLAEFYDFCKQLELARTFQFPTLRQPPASFLATM
EEYIREAPRPSIKSEESEEPKLLTYDQEAPEEPENPVEEEKEEPEQEPEPQPVPDPEPHP
QQTTGDLLNLDAEVNPSVAELEESNALALAIIAPGDCKASVSQSMFDVNSSGWELALVTA
PSTHTSQAVQTNLAGGFDKLLLDSLYEDGARRQQIASVTYTGSLGAANPFSVNGNDPFAM
SSSFAPPANVQLALMTQNQQQYYQAQQYFQPQQQYFQQHQQTSAMPTQNMYHHQYQYSVP
PSGAPNPFGDPFSDLAPMGAPGKQSNSVFL

Transcript Sequence

Transcript ID

EES06356
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:4826608:4830172:-1 gene:SORBI_3004G060400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGGAGCACCGCCACCGACCGCAGGCTAAAATTAGCGAGAGAGGTGTGCGGTGGTCAGGC
GGGCAGGGTATGGGGGGAAGCAGCGGGGGGTGGCGGCGAGGTGGCATTACCGATTGGAAG
AAGGGAGGGAAGAGGAAGAGGCGAGGTGAGGGAGGACGAAGAGGGCGCATTGTGGGTTGG
GTGATCACGGCCTGATGGGGTCGTGGCGCAAGGCCTACGGCGCCCTCAAGGACTCCACCA
CGGTTGGCCTCGCCAAGGTCAACAGCGAATTCAAGGAATTGGATATTGCAATTGTGAAGG
CAACCAACCATGTCGAATGCCCTCCCAAGGAACGGCACGTTAGAAAAATATTGCTGGCAA
CCTCAGCAAATCGCCCTCGCGCAGACGTCTCGTACTGCATGTATGCATTGTCAAGGAGAT
TGTCCAAGACAAAGAACTGGATAGTTGCCCTCAAGACATTGATAGTGGTACATAGGCTTC
TGAGAGAGGGTGATCCCACATTCAAGGAAGAATTCCTGGCCTACTCAAGCAGGGGGAACA
TTTTGTATATAGCCAATTTCAAGGATGACTCGAGCCAATCAGCTTGGGATTGTTCCGCAT
GGGTTCGCACCTATGCATTCTTCCTGGAGGAACGGCTCGAGTGCTTTAGGGTTCTCAAAT
ACGACATCGAAACTGAGCGTCTCGTGAGATATCCCCAGACTTCTAGCAAGGCACATAGTA
AAACCAGGAACCTACCTAGCCCAGAACTTTTGGAGCAGTTGCCTGCACTGCAGCAGCTGC
TTTTCAGGGTTGTAGGCGTCCAGCCTGAAGGTGCTGCCTGCTCAAATTACCTTATTCAGT
ATGCACTAGCCCTGGTTCTGAAGGAGAGCTTTAAGATCTACTGTTCGATTAATGATGGCA
TCATCAATCTCGTTGATATGTTCTTCGATATGCCAAAGTATGAAGCAATCAACGCTCTGG
CAATTTACAAACGAGCTGGCCTGCAGGCAGAAAACCTTGCCGAGTTCTATGACTTCTGCA
AACAACTTGAGCTTGCCAGGACATTCCAGTTTCCTACTCTCAGGCAGCCACCTGCATCGT
TTCTTGCAACAATGGAAGAGTACATCAGAGAAGCACCCCGACCCTCAATCAAGAGTGAGG
AGAGCGAGGAGCCGAAGCTACTGACCTATGACCAAGAAGCTCCAGAGGAACCCGAAAATC
CAGTGGAAGAGGAGAAAGAAGAACCTGAGCAAGAACCAGAACCTCAGCCTGTGCCTGATC
CAGAACCCCACCCACAGCAAACAACTGGAGATCTACTAAACCTGGATGCAGAGGTGAATC
CTTCAGTTGCAGAACTCGAAGAAAGCAATGCATTGGCGCTTGCTATTATAGCACCAGGTG
ACTGCAAGGCGTCAGTATCTCAAAGTATGTTTGATGTCAACTCGTCTGGGTGGGAGCTGG
CACTGGTCACTGCTCCAAGCACCCATACAAGTCAAGCAGTTCAGACCAACTTGGCTGGAG
GCTTTGACAAGCTGTTACTTGACAGCCTCTACGAAGACGGGGCAAGGAGGCAGCAGATCG
CCAGTGTGACCTACACAGGTAGCCTAGGAGCAGCCAACCCTTTCAGCGTCAATGGCAACG
ATCCGTTCGCCATGTCCAGCAGCTTCGCACCACCGGCTAATGTGCAGTTGGCACTGATGA
CTCAAAACCAACAGCAGTACTACCAGGCGCAGCAGTATTTCCAGCCACAGCAGCAGTATT
TTCAGCAGCATCAACAGACGTCGGCAATGCCAACACAAAACATGTACCACCACCAGTATC
AGTACTCTGTGCCTCCATCTGGAGCTCCAAACCCGTTTGGTGATCCTTTCAGTGACCTTG
CCCCAATGGGTGCTCCTGGAAAACAGAGCAACTCAGTTTTTCTCTGAACTGGTTGTCACT
TCTGATCATTCAATTGAGTAGAGCAGCAAACCTGTACAGCACGAGTTTCTTGGCTGAGTG
GAGGTGTTGTATATTAACTTTCTTTTGCAATATCCAAATCTTGAAATATAACATGAATTA
GTACCAGTTCTATGCTGAATAGTTTTTTACGGAACTAGAAGTTTCAGTGTATAATGAAAC
CATGCTGCCATACTCATCAGAAGAGTAAAACTGTCACTGGAATTCAAAGCAAGGC