Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06324
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:4054868:4060114:-1 gene:SORBI_3004G050300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCACCGGCGGCGAGGCGCCTCCTGCTCGCCGGAGCCGCCCGTCGCCGCCGCTTCTCC
ACGGACGCAGCGGCGTCGGACCCGTCCCGGCCGTCGCAGCAGCTGCCCAAGGATAAGCGG
TGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGCCTCGTCGCGGCCGCCTACCTCGCC
CGCGCGGGCCGCTCCGTCGCCGTGCTGGAGCGCCGGGGCATCCTGGGTGGCGCTGCGGTC
TCAGAGTCGGACCTTGTCCCCGGATTTCGCTTCTCCCGCTGCAGTTACCTCCTCAGCCTC
CTCCGCCCCGCCATCCTCCGTGACCTGGAGCTGGAGAGGCACGGACTGAAGCTGCTGCCA
CGGAGCCCTTCGTCGTTCACGCCATGCCTTGACGGCAGATACCTGCTTCTTGGTCCGGAT
GCGGAGCTAAACTTCTCAGAGATCAGCAAGTTCTCTAGGAAGGATGCAGAGGCATACCCA
AGATACGAGGAGAAGCTGGAGAAGTTCTGCAAGCTCATGGACTTTGTCATAGACTCGGCT
CCACCCGAGCTGAGGCAGGAGGTCCACTTCTCTATGGTTGACAGGATGAAGCATAGGGTC
GAGAAGTCAGCATTCTGGGGCCACCTTTTTCGGCATGTGATGCAGCAGGGGCAGACGAAC
ATGGTGGAATTCTTTGACCTCCTTCTTTCTCCGGCATCGAAAATCTTGAACACCTGGTTT
GAGAGTGAGGTTTTGAAGGCGACTCTTGCAACTGACGCCGTGATAGGAGCTATGGCTGGT
GTGCACACTCCAGGTTCTGGATATGTTCTCCTACACCATGTCATGGGGGAGACTGGTGGT
CAACGTGGTGTTTGGGCGTATGTCGAAGGTGGTATGGGTTCAGTGTCATCGGCTATAAGC
AAAGCAGCTCTTGAAGCAGGAGTGCAGATTGTAACAAATGCCGAGGTTTCCCAAGTAATG
GTTAATAATAGTGGAAGGGTAAAAGGGGTAGCTTTGGCTGATGGAACAGTGGTGCACTCG
CCAGTTGTTCTCTCAAATGCCACTCCATACAAAACATTTGTGGACCTAGTACCTTCTACT
GTTCTTCCAAAGGACTTCCTCTGTGCAATTAAGGCAGCAGATTACAGCTCTGCAACAACA
AAGATTAATGTAGCTGTCGACAAGCTGCCACAGTTCCAGTGTTGCAAAGACATCAACCCT
GAAGGTGGTCCAGAGCACATGGGCACCATACACATTGGGTCCGAAAGCATGGAGGAAATT
GACCTTGCATACAGGGAAGCAGCAGGCGGCATCTCATCCAAAAGACCTGTTATAGAAATG
ACAATTCCTTCTGTCTTGGATAAGACCATCTCTCCACCAGGTCAGCATGTTATTAATCTT
TTTGTTCAGTACACACCCTACAAACTTTCAGAAGGCAGTTGGCAGGATTCTAATGTCAGA
AAAGCCTTTGTTGAGCGATGCTTTTCTTTGATTGATGAATATGCACCGGGCTTTAGCTCA
TCGGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAGAGAGTTTGGTCTAACA
GGGGGCAACATTTTCCACGGTGCAATGGGCTTAGATTCTCTTTTCCTCATGAGGCCCGCC
AAGGGATGGTCAGATTACAGAACTCCTGTGAAGGGGCTGTACCTCTGCGGGAGTGGCGCA
CACCCAGGTGGTGGGGTGATGGGTGCGCCAGGACGCAACGCTGCCACCATTGTTTTGGAG
GACCTGATGAAGGGGAAATAG

Peptide Sequence

PEP ID

EES06324
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:4054868:4060114:-1 gene:SORBI_3004G050300 transcript:EES06324 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSPAARRLLLAGAARRRRFSTDAAASDPSRPSQQLPKDKRWDAVVIGGGHNGLVAAAYLA
RAGRSVAVLERRGILGGAAVSESDLVPGFRFSRCSYLLSLLRPAILRDLELERHGLKLLP
RSPSSFTPCLDGRYLLLGPDAELNFSEISKFSRKDAEAYPRYEEKLEKFCKLMDFVIDSA
PPELRQEVHFSMVDRMKHRVEKSAFWGHLFRHVMQQGQTNMVEFFDLLLSPASKILNTWF
ESEVLKATLATDAVIGAMAGVHTPGSGYVLLHHVMGETGGQRGVWAYVEGGMGSVSSAIS
KAALEAGVQIVTNAEVSQVMVNNSGRVKGVALADGTVVHSPVVLSNATPYKTFVDLVPST
VLPKDFLCAIKAADYSSATTKINVAVDKLPQFQCCKDINPEGGPEHMGTIHIGSESMEEI
DLAYREAAGGISSKRPVIEMTIPSVLDKTISPPGQHVINLFVQYTPYKLSEGSWQDSNVR
KAFVERCFSLIDEYAPGFSSSVVGYDMLTPPDLEREFGLTGGNIFHGAMGLDSLFLMRPA
KGWSDYRTPVKGLYLCGSGAHPGGGVMGAPGRNAATIVLEDLMKGK

Transcript Sequence

Transcript ID

EES06324
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:4054868:4060114:-1 gene:SORBI_3004G050300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCCGTCTTCTCTGCAGCGGTCGCGGAATCTACAGCGCACACACAAGTCACCATTTCTCAC
AAGTAGAAAGATTCCGCCCATCGTCCACTGCGCACTCGGCACGGGTGGCAGGTGAAGAAC
CCAAGCAGAACCCACGATGTCACCGGCGGCGAGGCGCCTCCTGCTCGCCGGAGCCGCCCG
TCGCCGCCGCTTCTCCACGGACGCAGCGGCGTCGGACCCGTCCCGGCCGTCGCAGCAGCT
GCCCAAGGATAAGCGGTGGGACGCGGTGGTGATCGGCGGCGGCCACAACGGCCTCGTCGC
GGCCGCCTACCTCGCCCGCGCGGGCCGCTCCGTCGCCGTGCTGGAGCGCCGGGGCATCCT
GGGTGGCGCTGCGGTCTCAGAGTCGGACCTTGTCCCCGGATTTCGCTTCTCCCGCTGCAG
TTACCTCCTCAGCCTCCTCCGCCCCGCCATCCTCCGTGACCTGGAGCTGGAGAGGCACGG
ACTGAAGCTGCTGCCACGGAGCCCTTCGTCGTTCACGCCATGCCTTGACGGCAGATACCT
GCTTCTTGGTCCGGATGCGGAGCTAAACTTCTCAGAGATCAGCAAGTTCTCTAGGAAGGA
TGCAGAGGCATACCCAAGATACGAGGAGAAGCTGGAGAAGTTCTGCAAGCTCATGGACTT
TGTCATAGACTCGGCTCCACCCGAGCTGAGGCAGGAGGTCCACTTCTCTATGGTTGACAG
GATGAAGCATAGGGTCGAGAAGTCAGCATTCTGGGGCCACCTTTTTCGGCATGTGATGCA
GCAGGGGCAGACGAACATGGTGGAATTCTTTGACCTCCTTCTTTCTCCGGCATCGAAAAT
CTTGAACACCTGGTTTGAGAGTGAGGTTTTGAAGGCGACTCTTGCAACTGACGCCGTGAT
AGGAGCTATGGCTGGTGTGCACACTCCAGGTTCTGGATATGTTCTCCTACACCATGTCAT
GGGGGAGACTGGTGGTCAACGTGGTGTTTGGGCGTATGTCGAAGGTGGTATGGGTTCAGT
GTCATCGGCTATAAGCAAAGCAGCTCTTGAAGCAGGAGTGCAGATTGTAACAAATGCCGA
GGTTTCCCAAGTAATGGTTAATAATAGTGGAAGGGTAAAAGGGGTAGCTTTGGCTGATGG
AACAGTGGTGCACTCGCCAGTTGTTCTCTCAAATGCCACTCCATACAAAACATTTGTGGA
CCTAGTACCTTCTACTGTTCTTCCAAAGGACTTCCTCTGTGCAATTAAGGCAGCAGATTA
CAGCTCTGCAACAACAAAGATTAATGTAGCTGTCGACAAGCTGCCACAGTTCCAGTGTTG
CAAAGACATCAACCCTGAAGGTGGTCCAGAGCACATGGGCACCATACACATTGGGTCCGA
AAGCATGGAGGAAATTGACCTTGCATACAGGGAAGCAGCAGGCGGCATCTCATCCAAAAG
ACCTGTTATAGAAATGACAATTCCTTCTGTCTTGGATAAGACCATCTCTCCACCAGGTCA
GCATGTTATTAATCTTTTTGTTCAGTACACACCCTACAAACTTTCAGAAGGCAGTTGGCA
GGATTCTAATGTCAGAAAAGCCTTTGTTGAGCGATGCTTTTCTTTGATTGATGAATATGC
ACCGGGCTTTAGCTCATCGGTGGTAGGCTATGATATGCTGACTCCACCTGATCTTGAAAG
AGAGTTTGGTCTAACAGGGGGCAACATTTTCCACGGTGCAATGGGCTTAGATTCTCTTTT
CCTCATGAGGCCCGCCAAGGGATGGTCAGATTACAGAACTCCTGTGAAGGGGCTGTACCT
CTGCGGGAGTGGCGCACACCCAGGTGGTGGGGTGATGGGTGCGCCAGGACGCAACGCTGC
CACCATTGTTTTGGAGGACCTGATGAAGGGGAAATAGATGTAGCTCGCTGGAAACGGAGA
TGGCATTTTCATCATCAGGAGGAGAAAAAGAAAAGCCTGCAAAAACACATCATTCATTTC
TTATGGTGCAATTTTAGTGCCATTCATTCATCTAAAGAGTTTTGGGGTTGCGCAAGTTCC
TTTTTGTGGAGAATTATTGTCGCAATCCATAGTCGGACCCGGCGCTGGATCCAAACTCTC
AGCGAGACTGATGGAGAACTTATCATGTGAAACAAATGGGCACTAACATTTTGGTCCGTA
TCTGGCGTGAAATTAGGCCCATCTCTTTGGATGAACAACCAATCATGGCCATCCTAAGAC
AAATGAACATGCTGAGGTATTGTCATCATCATAGT