Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06300
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:3705318:3707468:-1 gene:SORBI_3004G045100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCCGCTCCAGTATTCATGCAACAACAGAAAATCAGAAATGCTACACATACCTTTA
CTTGGTGTTGCTCTTGTGTTATTTCTCTCCTTGGCCTCTCCTGCCATCTCCTGCAAAGAA
GAGGAGAAGACCTCCCTCTTTGAGTTCCTCAATGGTCTCTCTCAAGCCTCTGGCCTCACC
AGTTCATGGCAGAATGACACAAACTGCTGTCTATGGGAGGGTGTCATTTGCAATGTAGAT
GGAACTGTCATAGACATCTCACTAGCTGCTATGGGCCTTGAGGGGCACATATCACCCTCA
CTTGGCAATCTCAACGGCCTGTTGAAGCTCAACCTATCTGGCAACTTGCTCTCCGGTGAA
CTCCCACCGAAACTGTTGCTCTCTAGAAGCCTTACTGTCCTCGACGTCAGCTTCAACAAG
CTCAGTGGAGAATTCCATGAGCTGCAATCCACCCCTGACAGTGCAATGAAGGTAATGAAC
ATCTCAAGTAACTTTCTGACAGGATATTTTCCATCCACCACATTAGAGGGCATGAAGAAT
CTGGCTGCTCTCAATATGAGCAATAATAGCTTTGCTGGGGAAATTCCAAGCACAGTTTGT
GTTGATAAACCATTCTTCGTGGTCCTTGACCTTAGCTACAACCAATTCATTGGTAGAATA
CCCCCAGAGCTTGGTAATTGCTCTGGTTTGAGAGTGCTTAAGGCTGGCCAGAACCAACTC
AATGGGACCCTTCCAGCTGAGATCTTCAATGTTACCTCACTAGAGCACCTCTCTTTCCCT
AACAACCATTTGCAAGGAACACTTGATCCTGAGCGTGTAGGAAAACTCAGAAATTTGGCC
ATCCTCGATCTTGGGTGGAATGGGCTAAATGGCAAGATCCCAAATTCTATTGGGCAGCTC
AAGAGGCTGGAGGAGCTTCACTTAGACAATAACAACATGTCTGGAGAGCTGCCACCAGCC
CTTAGCAGTTGCTCAAATCTCACAACCATCATCCTTAAAGACAACAACTTCCAAGGAGAT
CTCAAACGTGTCAACTTCTCCACCCTGTCTAATCTAAAATTTTTAGATTGCAGGTCAAAC
AAATTCACTGGCACAATTCCAGAGAGCCTTTACTCCTGCAGCAACCTTATTGCGTTGCGG
CTATCTTTCAACAACCTTCATGGTCAATTTTCATCAGGGATAAACAATCTCAAGTCCCTC
AGATTCCTAGCTCTCGCTCACAACAATTTTACAAATATCACAAACACGCTTCAAATCCTC
AGTAAGTCCAGGTCACTCGCTCTCGTGCTAATTGGGGGCAACTTCAAGCATGAGACCATG
CCAGACTATGATGAATTTCATGGCTTTGAGAATCTTATGTGTCTTGCCATAAATGAATGT
CCACTGTATGGAAAGTTACCTAACTGGCTGGCTAAGCTCAAAAATTTGCGAGGGTTGCTG
TTAGACAACAACAAACTCAGTGGACCAATACCAGCCTGGATTAATAGCTTAAACCTTCTT
TTCTATCTTGACATATCCAATAACAATCTTACCGGTGACATACCAACAGCACTGATGGAG
ATGCCAACGCTTGAGGCAGCTCACTCTGACCCAATAATACTTAAGTTTCCTATCTACCTG
ACACCATTTCTTCAATACCGTACAACCAGTGGCTTCCCTAAAATGTTGAATCTAGGAAAC
AACAAATTCACCGGTGTAATTCCCCCAGAGATTGGCCAGCTACAAGCACTCCTTACACTC
AACTTGAGCTTCAACAACTTACATGGGGAGATCCCGCAATCAGTCGGCAACCTCACGAAT
CTGCAGGTGCTAGACTTATCCTACAACAATTTGACTGGTGCAATCCCTTCTGCACTGGAG
AGGCTTCACTTCCTTTCCAAATTCAACATTTCCAGAAACGATCTAGAAGGGCCTGTTCCA
ACTGGAGGCCAGTTCAGCACATTTCCAGATTCTAGCTTTTTTGGAAACCCAAAGCTGTGC
AGCGCTACGCTGATGCGCCACTGTAATTCAGTAGATGCAGCTCCAGTCTCTGTTGTCTCC
ACAGAAGAGTACACCGACAAGGTCATCTTTGCGATGGCCTTTGGTATGTTCTTCGGTGTC
GGAGTGCTGTATGACCAGATGGTCCTATTCAGATATATTTATTTCGTCTGA

Peptide Sequence

PEP ID

EES06300
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:3705318:3707468:-1 gene:SORBI_3004G045100 transcript:EES06300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQPLQYSCNNRKSEMLHIPLLGVALVLFLSLASPAISCKEEEKTSLFEFLNGLSQASGLT
SSWQNDTNCCLWEGVICNVDGTVIDISLAAMGLEGHISPSLGNLNGLLKLNLSGNLLSGE
LPPKLLLSRSLTVLDVSFNKLSGEFHELQSTPDSAMKVMNISSNFLTGYFPSTTLEGMKN
LAALNMSNNSFAGEIPSTVCVDKPFFVVLDLSYNQFIGRIPPELGNCSGLRVLKAGQNQL
NGTLPAEIFNVTSLEHLSFPNNHLQGTLDPERVGKLRNLAILDLGWNGLNGKIPNSIGQL
KRLEELHLDNNNMSGELPPALSSCSNLTTIILKDNNFQGDLKRVNFSTLSNLKFLDCRSN
KFTGTIPESLYSCSNLIALRLSFNNLHGQFSSGINNLKSLRFLALAHNNFTNITNTLQIL
SKSRSLALVLIGGNFKHETMPDYDEFHGFENLMCLAINECPLYGKLPNWLAKLKNLRGLL
LDNNKLSGPIPAWINSLNLLFYLDISNNNLTGDIPTALMEMPTLEAAHSDPIILKFPIYL
TPFLQYRTTSGFPKMLNLGNNKFTGVIPPEIGQLQALLTLNLSFNNLHGEIPQSVGNLTN
LQVLDLSYNNLTGAIPSALERLHFLSKFNISRNDLEGPVPTGGQFSTFPDSSFFGNPKLC
SATLMRHCNSVDAAPVSVVSTEEYTDKVIFAMAFGMFFGVGVLYDQMVLFRYIYFV

Transcript Sequence

Transcript ID

EES06300
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:3705318:3707468:-1 gene:SORBI_3004G045100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCCGCTCCAGTATTCATGCAACAACAGAAAATCAGAAATGCTACACATACCTTTA
CTTGGTGTTGCTCTTGTGTTATTTCTCTCCTTGGCCTCTCCTGCCATCTCCTGCAAAGAA
GAGGAGAAGACCTCCCTCTTTGAGTTCCTCAATGGTCTCTCTCAAGCCTCTGGCCTCACC
AGTTCATGGCAGAATGACACAAACTGCTGTCTATGGGAGGGTGTCATTTGCAATGTAGAT
GGAACTGTCATAGACATCTCACTAGCTGCTATGGGCCTTGAGGGGCACATATCACCCTCA
CTTGGCAATCTCAACGGCCTGTTGAAGCTCAACCTATCTGGCAACTTGCTCTCCGGTGAA
CTCCCACCGAAACTGTTGCTCTCTAGAAGCCTTACTGTCCTCGACGTCAGCTTCAACAAG
CTCAGTGGAGAATTCCATGAGCTGCAATCCACCCCTGACAGTGCAATGAAGGTAATGAAC
ATCTCAAGTAACTTTCTGACAGGATATTTTCCATCCACCACATTAGAGGGCATGAAGAAT
CTGGCTGCTCTCAATATGAGCAATAATAGCTTTGCTGGGGAAATTCCAAGCACAGTTTGT
GTTGATAAACCATTCTTCGTGGTCCTTGACCTTAGCTACAACCAATTCATTGGTAGAATA
CCCCCAGAGCTTGGTAATTGCTCTGGTTTGAGAGTGCTTAAGGCTGGCCAGAACCAACTC
AATGGGACCCTTCCAGCTGAGATCTTCAATGTTACCTCACTAGAGCACCTCTCTTTCCCT
AACAACCATTTGCAAGGAACACTTGATCCTGAGCGTGTAGGAAAACTCAGAAATTTGGCC
ATCCTCGATCTTGGGTGGAATGGGCTAAATGGCAAGATCCCAAATTCTATTGGGCAGCTC
AAGAGGCTGGAGGAGCTTCACTTAGACAATAACAACATGTCTGGAGAGCTGCCACCAGCC
CTTAGCAGTTGCTCAAATCTCACAACCATCATCCTTAAAGACAACAACTTCCAAGGAGAT
CTCAAACGTGTCAACTTCTCCACCCTGTCTAATCTAAAATTTTTAGATTGCAGGTCAAAC
AAATTCACTGGCACAATTCCAGAGAGCCTTTACTCCTGCAGCAACCTTATTGCGTTGCGG
CTATCTTTCAACAACCTTCATGGTCAATTTTCATCAGGGATAAACAATCTCAAGTCCCTC
AGATTCCTAGCTCTCGCTCACAACAATTTTACAAATATCACAAACACGCTTCAAATCCTC
AGTAAGTCCAGGTCACTCGCTCTCGTGCTAATTGGGGGCAACTTCAAGCATGAGACCATG
CCAGACTATGATGAATTTCATGGCTTTGAGAATCTTATGTGTCTTGCCATAAATGAATGT
CCACTGTATGGAAAGTTACCTAACTGGCTGGCTAAGCTCAAAAATTTGCGAGGGTTGCTG
TTAGACAACAACAAACTCAGTGGACCAATACCAGCCTGGATTAATAGCTTAAACCTTCTT
TTCTATCTTGACATATCCAATAACAATCTTACCGGTGACATACCAACAGCACTGATGGAG
ATGCCAACGCTTGAGGCAGCTCACTCTGACCCAATAATACTTAAGTTTCCTATCTACCTG
ACACCATTTCTTCAATACCGTACAACCAGTGGCTTCCCTAAAATGTTGAATCTAGGAAAC
AACAAATTCACCGGTGTAATTCCCCCAGAGATTGGCCAGCTACAAGCACTCCTTACACTC
AACTTGAGCTTCAACAACTTACATGGGGAGATCCCGCAATCAGTCGGCAACCTCACGAAT
CTGCAGGTGCTAGACTTATCCTACAACAATTTGACTGGTGCAATCCCTTCTGCACTGGAG
AGGCTTCACTTCCTTTCCAAATTCAACATTTCCAGAAACGATCTAGAAGGGCCTGTTCCA
ACTGGAGGCCAGTTCAGCACATTTCCAGATTCTAGCTTTTTTGGAAACCCAAAGCTGTGC
AGCGCTACGCTGATGCGCCACTGTAATTCAGTAGATGCAGCTCCAGTCTCTGTTGTCTCC
ACAGAAGAGTACACCGACAAGGTCATCTTTGCGATGGCCTTTGGTATGTTCTTCGGTGTC
GGAGTGCTGTATGACCAGATGGTCCTATTCAGATATATTTATTTCGTCTGA