Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES06189
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:1419816:1424664:-1 gene:SORBI_3004G018100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGAGCGCGCTGCTGACGGGGTCGCCGTGGCTGCGCATGCGCCTCCTCCCGGAC
GCGCCCGCGAGCCCCTTCCGCCACCTCCACCTCCGCCGGGCCCTCTCCGTCCGCGCCTCC
GCCGCCGGCACCGGCACCGGCACCGACGGCAGCTCCGGCCCCGTACGCGTCCGCTTCGCG
CCGTCGCCCACCGGCAACCTCCACGTCGGCGGCGCCCGCACCGCGCTCTTCAACTACCTC
TTCGCGCGCTCCAAGGGGGGACGCTTCGTGCTCCGCGTCGAGGACACCGACCTCGAGCGC
TCCACCAGGAAGTCTGAGGAGGCCGTCCTCGCCGACCTCGCCTGGCTCGGCCTCGAATGG
GACGAAGGTCCTGATGTCGGTGGGGAGTTTGGGCCTTATCGCCAGTCAGAGCGGAATTCA
CTATACAAGCAATATGCTGAGAAGCTTTTGGACTCTGGTGCGGTTTATCGCTGCTTTTGC
TCCAATGAGGAACTTGAACAAATGAAGGAAGTCGCAAAGCAGAGACAACTTCCTCCTGTG
TATATGGGGAAGTGGGCAAGTGCCTCAGATGTAGAAGTACAGCAGGAATTAGAGAAAGGG
ACACCTTACACTTACCGCTTCCGTGTGCCAAAGGAAGGGTCATTGAAAATTAATGACTTA
ATTCGTGGTGAGGTCAGTTGGAACTTAGACACACTTGGTGATTTCGTGATTATGAGAAGC
AATGGACAGCCTGTGTATAACTTCTGTGTGACAGTTGACGATGCTACCATGCAAATATCT
CATGTTATCAGAGCTGAAGAGCATTTACCAAACACATTGCGGCAAGCTCTAATTTACAAA
GCTCTTGGATTCTCAATGCCTTCATTTGCTCATGTTTCACTTATTCTGGCTCCTGACAGA
AGTAAACTGTCTAAACGGCATGGAGCTACTTCTGTCGGGCAGTATAAAGAGATGGGCTAT
CTACCTCAGGCAATGGTGAATTATTTAGCACTACTGGGCTGGGGTGATGGTACTGAAAAT
GAGTTCTTCACTATTGATAACCTAGTCCAGAAATTCACTATAAATCGTGTCAATAAAAGT
GGAGCAGTCTTTGATGCAACAAAATTGAAATGGATGAATGGACAACATTTAAGATCATTT
CCTCATGATGAACTCATCAAGGCTTTTGAAGATCGGTGGAAGAACACAGGCATTCTCCAG
GAATCTGAAAGTGGTTTTGCTCAGGAAGCTGCCGAGCTTTTGAAGGATGGTATTGATTTG
ATAACAGATGCTGATGCAGCTCTTACAAATTTGTTGTCGTATCCCCTTCATACTACTTTA
AGCAGTGAGGAAGCTAAACCTGTGGTGCAAGACAAGATTTCTGAGGTTGCTTTGAGTCTT
ATTACTGCGTATGATAGCGGTGAACTCACTCAAGCACTAGCCGAGGGCCGTGATGGTTGG
CAGAAGTGGGTTAAAGGTTTTGGAAAGTCTATCAAAAGAAAGGGCAAAGGGCTCTTCATG
CCGCTCCGAGTACTGTTGACCGGGAAGCTTCATGGGCCTGACATGGGCGGCAGCATAGCC
CTAATACACAAAGCCGGCATCTGCGGTGCTGTGACTTCACAGTCCAACTTTGTGACTCTA
GATGAGCGGTTCAGGATCCTCAAGGAGGTTGACTGGGAGTCGTTGGCGAAGGAGCAAGAA
ACCCCTGCTGAATCTGCTGTTCCTGCCGCTTCATAG

Peptide Sequence

PEP ID

EES06189
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:1419816:1424664:-1 gene:SORBI_3004G018100 transcript:EES06189 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASALLTGSPWLRMRLLPDAPASPFRHLHLRRALSVRASAAGTGTGTDGSSGPVRVRFA
PSPTGNLHVGGARTALFNYLFARSKGGRFVLRVEDTDLERSTRKSEEAVLADLAWLGLEW
DEGPDVGGEFGPYRQSERNSLYKQYAEKLLDSGAVYRCFCSNEELEQMKEVAKQRQLPPV
YMGKWASASDVEVQQELEKGTPYTYRFRVPKEGSLKINDLIRGEVSWNLDTLGDFVIMRS
NGQPVYNFCVTVDDATMQISHVIRAEEHLPNTLRQALIYKALGFSMPSFAHVSLILAPDR
SKLSKRHGATSVGQYKEMGYLPQAMVNYLALLGWGDGTENEFFTIDNLVQKFTINRVNKS
GAVFDATKLKWMNGQHLRSFPHDELIKAFEDRWKNTGILQESESGFAQEAAELLKDGIDL
ITDADAALTNLLSYPLHTTLSSEEAKPVVQDKISEVALSLITAYDSGELTQALAEGRDGW
QKWVKGFGKSIKRKGKGLFMPLRVLLTGKLHGPDMGGSIALIHKAGICGAVTSQSNFVTL
DERFRILKEVDWESLAKEQETPAESAVPAAS

Transcript Sequence

Transcript ID

EES06189
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:1419816:1424664:-1 gene:SORBI_3004G018100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAATCCTCAGAAAAGGGTGAGATGGCGGCGAGCGCGCTGCTGACGGGGTCGCCGTGGCT
GCGCATGCGCCTCCTCCCGGACGCGCCCGCGAGCCCCTTCCGCCACCTCCACCTCCGCCG
GGCCCTCTCCGTCCGCGCCTCCGCCGCCGGCACCGGCACCGGCACCGACGGCAGCTCCGG
CCCCGTACGCGTCCGCTTCGCGCCGTCGCCCACCGGCAACCTCCACGTCGGCGGCGCCCG
CACCGCGCTCTTCAACTACCTCTTCGCGCGCTCCAAGGGGGGACGCTTCGTGCTCCGCGT
CGAGGACACCGACCTCGAGCGCTCCACCAGGAAGTCTGAGGAGGCCGTCCTCGCCGACCT
CGCCTGGCTCGGCCTCGAATGGGACGAAGGTCCTGATGTCGGTGGGGAGTTTGGGCCTTA
TCGCCAGTCAGAGCGGAATTCACTATACAAGCAATATGCTGAGAAGCTTTTGGACTCTGG
TGCGGTTTATCGCTGCTTTTGCTCCAATGAGGAACTTGAACAAATGAAGGAAGTCGCAAA
GCAGAGACAACTTCCTCCTGTGTATATGGGGAAGTGGGCAAGTGCCTCAGATGTAGAAGT
ACAGCAGGAATTAGAGAAAGGGACACCTTACACTTACCGCTTCCGTGTGCCAAAGGAAGG
GTCATTGAAAATTAATGACTTAATTCGTGGTGAGGTCAGTTGGAACTTAGACACACTTGG
TGATTTCGTGATTATGAGAAGCAATGGACAGCCTGTGTATAACTTCTGTGTGACAGTTGA
CGATGCTACCATGCAAATATCTCATGTTATCAGAGCTGAAGAGCATTTACCAAACACATT
GCGGCAAGCTCTAATTTACAAAGCTCTTGGATTCTCAATGCCTTCATTTGCTCATGTTTC
ACTTATTCTGGCTCCTGACAGAAGTAAACTGTCTAAACGGCATGGAGCTACTTCTGTCGG
GCAGTATAAAGAGATGGGCTATCTACCTCAGGCAATGGTGAATTATTTAGCACTACTGGG
CTGGGGTGATGGTACTGAAAATGAGTTCTTCACTATTGATAACCTAGTCCAGAAATTCAC
TATAAATCGTGTCAATAAAAGTGGAGCAGTCTTTGATGCAACAAAATTGAAATGGATGAA
TGGACAACATTTAAGATCATTTCCTCATGATGAACTCATCAAGGCTTTTGAAGATCGGTG
GAAGAACACAGGCATTCTCCAGGAATCTGAAAGTGGTTTTGCTCAGGAAGCTGCCGAGCT
TTTGAAGGATGGTATTGATTTGATAACAGATGCTGATGCAGCTCTTACAAATTTGTTGTC
GTATCCCCTTCATACTACTTTAAGCAGTGAGGAAGCTAAACCTGTGGTGCAAGACAAGAT
TTCTGAGGTTGCTTTGAGTCTTATTACTGCGTATGATAGCGGTGAACTCACTCAAGCACT
AGCCGAGGGCCGTGATGGTTGGCAGAAGTGGGTTAAAGGTTTTGGAAAGTCTATCAAAAG
AAAGGGCAAAGGGCTCTTCATGCCGCTCCGAGTACTGTTGACCGGGAAGCTTCATGGGCC
TGACATGGGCGGCAGCATAGCCCTAATACACAAAGCCGGCATCTGCGGTGCTGTGACTTC
ACAGTCCAACTTTGTGACTCTAGATGAGCGGTTCAGGATCCTCAAGGAGGTTGACTGGGA
GTCGTTGGCGAAGGAGCAAGAAACCCCTGCTGAATCTGCTGTTCCTGCCGCTTCATAGAC
TGCCAGTACGCCTTCATATCGGTCAGGGATGACGCTGCCCACAATGTTGCGCTTGAGGAG
TTCTGTCCATTTTGCCGTGTTTTTGTCACGTTCTGTTCCATCCAGTAGCAGAAGTTCAGT
GGTTAATAAAGCGATTTTTTATCATATAGGTTGATGCTGTAATGGGGTTAATATTGAATT
ATTAGATGAGGATGCTGTCTGTTATCTACGTGCCTACAGTTTCTCGTTTGCTGAATACAG
GATTGTTACAGGTGTTCATAAGCATTATAAAAACTGTTCCGCACTCGGATGTTGCTCGTG
ATTGACATAATAATAAGGCCTTGTTTAGTTCAAAAAATTTTTGCAAAATAGAAATAGTAG
CACTTTCGTTTGTATTTGACAAATATTGTCTAGATTTAAAAGATTCGTCTTGTCAATTCC
AACTAAACTGTGTAATTAGTTTTTATTTTCATCTATATTTAATACTCTATGCATACTTCT
AAAGATTTGACGGGAAATCTGAAAAATTTTGCAAAATTTTGAGGAAGTAAACAAGGCCGA
AGTCGGACGATAAATTT