Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05993
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:67216199:67224115:1 gene:SORBI_3004G340400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGAACAAAAAATCCCGCGGCCGGGGCGGGGGAGGCGGTGCCGCCGCCTCCGGCGAC
GGCCATGAGGACCTCGCGCGCCCGCCCCCACTCCAGGCGGTCCTCCTCGCCGACAGCTTC
ACGCTCAAATTCCGCCCCATCACCCTCGAGCGCCCCAAGGTGCTGCTGCCGCTGGTGCAC
ATGCCGATGATCGAGTACACGCTCACGTGGCTGGAGTCTGCGGGGGTGGAGGAGGCCTTC
GTCTTCTGCTGCGCGCACTCGCACCAGGTCAAGGAGTACTTGGAGAAGGCCGGTTGGGCT
GGTAAGTCTGGGCCCGGGAGCATGGCCGTCACGGCCGTCGAGTCCCACGACGCGATTAGC
GCGGGCGACGCGCTCCGCGTCATCTACGACCGCGGCGTGATACACGGAGATTTCGTTCTC
ATCAGTGGTGATACGGTCAGTAACATGAGCTTGAAGGATGCTCTCCAGGAGCATATGGAC
AGGAAGAAAAAGGACCCACTTGCTGTTATGACTATGGTTATAAAGCATTCAAAACCTTCT
ATCCTGACACACCAAACTCGCCTGGGTAACGATGAAATTGTTATGGCGATAGATCCTGAG
ACAAAGGAGTTACTTTATTACGAGGACAGGGCAGATAGCTCACACTTGTATGTTACAATT
GATAAGGATATACTGACCAATAATCCTACTCTCCAGCTGCATAATGACATGGAGGACTGC
TATATAGATATCTGCTCTCCAGAAGTCCTAAGTCTTTTTACAGATAACTTTGATTATCAG
CATCTTCGGCGTCATTTTGTGAAGGGCTTACTAGTTGACGATATTATGGGGTACAAAATC
TATACTCATGAATTACGCTCTGGATATGCTGCAAGGATTGATAATTTCAGGAGTTATGAT
ACCGTGAGCAAAGATGTAATTCAAAGGTGGACATACCCTATGGTGCCTGATGTAATATCA
AGTCGTGATTGCTCAGAAAGTAGACTTCATAGGCAGGGAATATACAAAGCATCAGATGTA
ACATTGTCACCTTCCGCACAAATTGGTGCAAATTCTGTTGTTGGTAGTGCGACTAGTATT
GGAGACCACTGCAAAGTATTAAATTCAGTTATTGGGGAGGGCTGCAAGATTGGGAAAAAT
GTTTTGATTAACGGCTCATTCATATGGGACAATGTCATAATCGAAGATGGATGCAAAGTC
AGTAACTCTTTAGTCTGTGATGGTGTTCATTTAAGAGCTGGTGCTATTGTTGAACCTGGT
TGCGTACTCTCATTTAAGGTTGAAGTTGGAAAGAATGTTGTTGTGCCTGCCCACTCAAAA
GTTTCATTACTTCCTCAGCCTTCAAATGAAGATAGTGATGAAGAACTTGAGTATGCTGAC
ACCAACTCTGGAATTACAGACAGTCCACCATTTTCCAGTATGAGGAGTAATGGTGATCAA
GCAACTGTTCCTTTGGAAGAAGATGAGTTGGGAACATCTGAGGCTGGTACCTGTGGTGTT
GTCGGTTACGTATGGACAAGCGTTGATACTGGGATCGTGGAAGAATGGAGACAATCAATT
GCCCCGATTCCTAAAGAAAAACTTGAAGAGCTGCGGCATGCTGCGTCTGATGATGATGGG
TCAGAAGATGAATCCAATAATCGGACTCTACCAGATAAAGATGATTCGTCAGACAGTGTG
GTTGATGATGATGATCATATTTCTAAGTTTGAGAAAGAGGTGGAAGAGACATTTCAGCGA
GCCCTGGGTGGCGGCGTTAATCGAGATAATTTGATACTAGAGATTAATGGCCTAAGGTTA
GCCTACAGCCTTCAACATGCAGATTGTGCTGGAGCTGTGTTCTATTCTGTCATGAAGAGT
GCATTAGTGGCTGCACAATCTACTAATGATACTCTTCTAAAGACAACTGCTGATGCACTT
GGCAAGTGGAAGGATCTTTTGCGCAATTACACCAAGACAGTTGATGAGGAGATGGAGATA
CTTTTAAAGTTTGAGGAAATGTGTCAAGAGACCACAAAAGAGTTTTCTCCGCTGTTTCCA
ACGATCTTGCCATACCTCTATGACAGAGAGGTTGTAAGTGAAGATGCAATTTTGAGATGG
GCGGAAGAGAAAGAACATGCAGATGAGTCTGATAAAGTCTTTGTTAAACAGTCAGAGGCC
TTTATTAAGTGGCTCAAGGAAGCTGAAGAGGAGGATGACGAAGAGGAGGAATAA

Peptide Sequence

PEP ID

EES05993
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:67216199:67224115:1 gene:SORBI_3004G340400 transcript:EES05993 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSNKKSRGRGGGGGAAASGDGHEDLARPPPLQAVLLADSFTLKFRPITLERPKVLLPLVH
MPMIEYTLTWLESAGVEEAFVFCCAHSHQVKEYLEKAGWAGKSGPGSMAVTAVESHDAIS
AGDALRVIYDRGVIHGDFVLISGDTVSNMSLKDALQEHMDRKKKDPLAVMTMVIKHSKPS
ILTHQTRLGNDEIVMAIDPETKELLYYEDRADSSHLYVTIDKDILTNNPTLQLHNDMEDC
YIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIYTHELRSGYAARIDNFRSYD
TVSKDVIQRWTYPMVPDVISSRDCSESRLHRQGIYKASDVTLSPSAQIGANSVVGSATSI
GDHCKVLNSVIGEGCKIGKNVLINGSFIWDNVIIEDGCKVSNSLVCDGVHLRAGAIVEPG
CVLSFKVEVGKNVVVPAHSKVSLLPQPSNEDSDEELEYADTNSGITDSPPFSSMRSNGDQ
ATVPLEEDELGTSEAGTCGVVGYVWTSVDTGIVEEWRQSIAPIPKEKLEELRHAASDDDG
SEDESNNRTLPDKDDSSDSVVDDDDHISKFEKEVEETFQRALGGGVNRDNLILEINGLRL
AYSLQHADCAGAVFYSVMKSALVAAQSTNDTLLKTTADALGKWKDLLRNYTKTVDEEMEI
LLKFEEMCQETTKEFSPLFPTILPYLYDREVVSEDAILRWAEEKEHADESDKVFVKQSEA
FIKWLKEAEEEDDEEEE

Transcript Sequence

Transcript ID

EES05993
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:67216199:67224115:1 gene:SORBI_3004G340400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCCGAGCCACGGCGACGCCGACGCCGCGAGCGAGCGAGCAGACCTAAACCTCCGAACTC
CTCTCCGCCGCCGCACCCGCAGCAATCATGTCGAACAAAAAATCCCGCGGCCGGGGCGGG
GGAGGCGGTGCCGCCGCCTCCGGCGACGGCCATGAGGACCTCGCGCGCCCGCCCCCACTC
CAGGCGGTCCTCCTCGCCGACAGCTTCACGCTCAAATTCCGCCCCATCACCCTCGAGCGC
CCCAAGGTGCTGCTGCCGCTGGTGCACATGCCGATGATCGAGTACACGCTCACGTGGCTG
GAGTCTGCGGGGGTGGAGGAGGCCTTCGTCTTCTGCTGCGCGCACTCGCACCAGGTCAAG
GAGTACTTGGAGAAGGCCGGTTGGGCTGGTAAGTCTGGGCCCGGGAGCATGGCCGTCACG
GCCGTCGAGTCCCACGACGCGATTAGCGCGGGCGACGCGCTCCGCGTCATCTACGACCGC
GGCGTGATACACGGAGATTTCGTTCTCATCAGTGGTGATACGGTCAGTAACATGAGCTTG
AAGGATGCTCTCCAGGAGCATATGGACAGGAAGAAAAAGGACCCACTTGCTGTTATGACT
ATGGTTATAAAGCATTCAAAACCTTCTATCCTGACACACCAAACTCGCCTGGGTAACGAT
GAAATTGTTATGGCGATAGATCCTGAGACAAAGGAGTTACTTTATTACGAGGACAGGGCA
GATAGCTCACACTTGTATGTTACAATTGATAAGGATATACTGACCAATAATCCTACTCTC
CAGCTGCATAATGACATGGAGGACTGCTATATAGATATCTGCTCTCCAGAAGTCCTAAGT
CTTTTTACAGATAACTTTGATTATCAGCATCTTCGGCGTCATTTTGTGAAGGGCTTACTA
GTTGACGATATTATGGGGTACAAAATCTATACTCATGAATTACGCTCTGGATATGCTGCA
AGGATTGATAATTTCAGGAGTTATGATACCGTGAGCAAAGATGTAATTCAAAGGTGGACA
TACCCTATGGTGCCTGATGTAATATCAAGTCGTGATTGCTCAGAAAGTAGACTTCATAGG
CAGGGAATATACAAAGCATCAGATGTAACATTGTCACCTTCCGCACAAATTGGTGCAAAT
TCTGTTGTTGGTAGTGCGACTAGTATTGGAGACCACTGCAAAGTATTAAATTCAGTTATT
GGGGAGGGCTGCAAGATTGGGAAAAATGTTTTGATTAACGGCTCATTCATATGGGACAAT
GTCATAATCGAAGATGGATGCAAAGTCAGTAACTCTTTAGTCTGTGATGGTGTTCATTTA
AGAGCTGGTGCTATTGTTGAACCTGGTTGCGTACTCTCATTTAAGGTTGAAGTTGGAAAG
AATGTTGTTGTGCCTGCCCACTCAAAAGTTTCATTACTTCCTCAGCCTTCAAATGAAGAT
AGTGATGAAGAACTTGAGTATGCTGACACCAACTCTGGAATTACAGACAGTCCACCATTT
TCCAGTATGAGGAGTAATGGTGATCAAGCAACTGTTCCTTTGGAAGAAGATGAGTTGGGA
ACATCTGAGGCTGGTACCTGTGGTGTTGTCGGTTACGTATGGACAAGCGTTGATACTGGG
ATCGTGGAAGAATGGAGACAATCAATTGCCCCGATTCCTAAAGAAAAACTTGAAGAGCTG
CGGCATGCTGCGTCTGATGATGATGGGTCAGAAGATGAATCCAATAATCGGACTCTACCA
GATAAAGATGATTCGTCAGACAGTGTGGTTGATGATGATGATCATATTTCTAAGTTTGAG
AAAGAGGTGGAAGAGACATTTCAGCGAGCCCTGGGTGGCGGCGTTAATCGAGATAATTTG
ATACTAGAGATTAATGGCCTAAGGTTAGCCTACAGCCTTCAACATGCAGATTGTGCTGGA
GCTGTGTTCTATTCTGTCATGAAGAGTGCATTAGTGGCTGCACAATCTACTAATGATACT
CTTCTAAAGACAACTGCTGATGCACTTGGCAAGTGGAAGGATCTTTTGCGCAATTACACC
AAGACAGTTGATGAGGAGATGGAGATACTTTTAAAGTTTGAGGAAATGTGTCAAGAGACC
ACAAAAGAGTTTTCTCCGCTGTTTCCAACGATCTTGCCATACCTCTATGACAGAGAGGTT
GTAAGTGAAGATGCAATTTTGAGATGGGCGGAAGAGAAAGAACATGCAGATGAGTCTGAT
AAAGTCTTTGTTAAACAGTCAGAGGCCTTTATTAAGTGGCTCAAGGAAGCTGAAGAGGAG
GATGACGAAGAGGAGGAATAACCCTGGAGATGTCACTCGAATTCTTTCATGCATTGTGAG
TTCAGAATCCGATTTGAGTGGTCTCCCGGTGAGTTTGCGACCATCAAGTTTTGTAACCTG
TAATTGTTTGTACATCAACACAATACAATTTTGTCCCTAACCGCAACCGGTGGAGAGTAC
CAAGGAGCAATTTGGCGATGAGGCGTGAATGAATCAAAATGATCCCAGTGTAGACGACAT
ACTATAACTGTACCATCCTTGCTTGGTTGACGCTTGGGCGAAGTTTTCGCCACATTTGTT
TAACTGCCCATCATCTGTTTCTTTGCACCCAGCCCAGCACTTGCACAAATCTTTAATAAA
AGCTTGTTCAGATATGGCCCCCTTTTCTCTTCTTTCTGCTGAGAAATGTAGTGGGGAAGA
AAGCAATGGAGGCTTCTTCCCCGAAAGGCCCCAGTGGATCATGTGGGTTGCGTAGATCCG
GCACTAATCTTACCTCAAAAGAGGCACGGTTTGCTTAAAGTACGCTCTTTTGCCCCCCAA
AACCTTTGATGTTTTTTTGCCCTAGACTAGACTAGATCCCTGATAGCCTTGCCTGCTTTG
TGAAACGACCCAACAGTGGGCAGCAAAATCAATGGCTGATGGAAAAGGAGTAAAAAACCA
GAAGGGCCCTGGGGGGACTAAAGAGGAAAAGCCGGCACGGGTGAGCAGTGGAAGGTTGCA
TGCACACTTGCACTGCTGGACTAAGCAATCTCGCTGTGCCTTCGGCCTTCGCCATCTTCT
GCAGCATGTGCTGTTTTGAGTTTATTTATTCTGCATACTGTGACTAGCATGCATTCTTTA
ATGTTTGAGATGGTTTTACTTGACCATGAGAAAGCATGTTTCTATCAACAGACCACCTAA
TTTTGTTTGACCTTTTCCTAATCTGCTGGTCATAAAGAGTTACCGCGGAATCACACTGGG
CAATAAGATATAAGATACAGATAACCTAGGCTGGACAGGGATCACATTTGGACTTG