Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05976
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:66803861:66808809:1 gene:SORBI_3004G336100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTACGTGGTGAAGCGCGACGGCCGGCAGGAGTCGGTCCACTTCGACAAGATCACCGCG
CGGCTCACGAGGCTTAGCTACGGCCTCAGCGCGGAGCACTGCGACCCCGTCCTTGTCGCC
CAGAAGGTCTGCGCCGGCGTCTACAAGGGCATCACCACCGGCGAGATTGGTGAGCTCGCC
GCCGAGACCGCCGCCGCCATGACCACCTCGCATCCCGACTACGCATCGCTGGCGGCGAGG
ATCGCGGTCTCCAATCTGCACAAGAACACCATGACGTCCTTTTCAGCGACGGTAAAGGCT
CTCTATACGCATTATGACGAGAGGTCTGGTTTGATGGCTCCCCTGATTGCTGATGATGTC
TTCACGATCATTATGAAGAATACTGCTCGCTTGGAGTGTGAGATAAATTATGACCGAGAT
TTCGACTATGATTATTTTGGTTTTAAGACTCTTCAGAGGTCCTATCTGTTGAAAATTGGT
GGAAAGGTCGCGGAAAGGCCGCAACATATGTTGATGAGAGTTTCTGTCGGCATACATAAG
GATGATATTGAATCTGCTATCAAAACATACCACATGATGTCTCAACGCTGGTTTACTCAT
GCTTCCCCAACCCTGTTCAACGCTGGCACTCCAAGGCCGCAATTAAGTAGCTGCTTCCTT
ATCTGCATGAAAGATGATAGTATTGAAGGAATTTATGATACTCTCTCAGAATGTGCTGCC
ATAAGCAAATCTGCTGGAGGAATTGGTGTCTCAATTCACAATATTCGAGCTACTGGGAGT
TATATTCGAGGAACAAATGGAACTTCTAATGGAATTGTTCCTATGCTACGTGTTTTCAAT
GATACTGCCCGTTATGTTGATCAAGGCGGAGGCAAGAGAAAAGGTGCATTTGCTGTTTAT
TTGGAGCCTTGGCATCCTGATATCTTTGAGTTCCTTGATCTAAAAAAGAACCATGGAAAG
GAGGAGAATCGTGCAAGGGATCTTTTCTATGCTTTGTGGGTTCCTGATCTATTTATGGAA
AGGGTACAACATAATGAACAGTGGTCACTATTTTGCCCCAGTGAAGCTCCTGGTCTGGCT
GATTGCTGGGGTGATGAGTTTCAGAATCTGTACCAGAAATATGAAAGAGAAGGCAAGGCA
AAGAAAGTGGTTGCAGCGCAGGCCCTCTGGTTCGATATTTTAAAGGCACAGATAGAAACT
GGAACTCCCTATATGCTTTACAAGGATGCTTGCAACAGAAAAAGTAACCAACAAAATCTT
GGCACAATTAAGTCCTCCAACTTGTGTACTGAGATAATTGAGTATACAAGTCCTTCTGAA
ACTGCTGTGTGCAATCTTGCGTCAATTGCTTTACCACGTTTTGTGAGGGAAAAGGGTGTT
CCTATAGAATCTCATCCAGCTAAGCTTGTTGGTAGCAGCGGATCGAAAAATAGATACTTT
GACTTTGATAAATTAGCTGAGATTACTTCAATTGTTACATGTAATCTCAACAAAATCATT
GATATTAGCTATTATCCCATTGAGAATGCAAGGAGGTCAAATATGAGGCATAGACCAATT
GGGATAGGCGTTCAAGGCTTGGCAGATACTTTTATTCTACTTGGAATGCCATTTGATTCA
CCAGAGGCCCAGCAGTTAAATAAAGATATTTTTGAAACTATTTATTATCACTCGTTGAAA
GCTTCTGCTGAACTTGCTGCAAAAGAAGGCCCTTATGAAACATATGCTGGGAGCCCTGTC
AGCAAGGGCATTCTTCAACCTGATATGTGGAATGTAGTGCCATCTAGTAGGTGGAACTGG
TCAGCAATAAGGGAAATGATTTCTCAGGTGGGATTGAGGAACTCTCTTCTTGTTGCTCCT
ATGCCAACTGCTTCCACTAGTCAAATTCTTGGCAACAATGAGTGCTTTGAACCATACACC
TCAAATATATACAGTCGACGAGTTTTGAGCGGTGAATTTGTTGTAGTAAATAAGCATCTT
CTCCATGATTTGAGTGAGATGGGTGTCTGGTCTCCTGTTCTAAAGAACAAGATTATCTAT
GAGGATGGTTCTGTCCAAAAAATTACCGAAGTTCCAGATGATCTAAAAGCAATTTACAAG
ACTGTTTGGGAGATCAAGCAGAAAACTATTGTTGACATGGCCATTGACCGTGGTTGCTAT
ATCGATCAGAGCCAGAGCCTTAATATCCACATGGAACAACCAAACTCTGGGAAGCTAACT
TCATTGCACTTCCATGGTTGGTCAAAGGGCCTCAAAACAGGGATGTATTACTTAAGAACT
CGAGCTGCTGCTGATGCAATCAAGTTTACAGTTGATACTACTCTTCTCAAGGATAAGCAG
CCGACTTCAGAAGAAGAGGATGCCCAGGTTAAAATGGCACAAGTGGCCTGTTCCTTGAAC
AACCGGGAGGAGTGCTTAGCATGTGGAAGTTAG

Peptide Sequence

PEP ID

EES05976
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:66803861:66808809:1 gene:SORBI_3004G336100 transcript:EES05976 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MYVVKRDGRQESVHFDKITARLTRLSYGLSAEHCDPVLVAQKVCAGVYKGITTGEIGELA
AETAAAMTTSHPDYASLAARIAVSNLHKNTMTSFSATVKALYTHYDERSGLMAPLIADDV
FTIIMKNTARLECEINYDRDFDYDYFGFKTLQRSYLLKIGGKVAERPQHMLMRVSVGIHK
DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAA
ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
LEPWHPDIFEFLDLKKNHGKEENRARDLFYALWVPDLFMERVQHNEQWSLFCPSEAPGLA
DCWGDEFQNLYQKYEREGKAKKVVAAQALWFDILKAQIETGTPYMLYKDACNRKSNQQNL
GTIKSSNLCTEIIEYTSPSETAVCNLASIALPRFVREKGVPIESHPAKLVGSSGSKNRYF
DFDKLAEITSIVTCNLNKIIDISYYPIENARRSNMRHRPIGIGVQGLADTFILLGMPFDS
PEAQQLNKDIFETIYYHSLKASAELAAKEGPYETYAGSPVSKGILQPDMWNVVPSSRWNW
SAIREMISQVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
LHDLSEMGVWSPVLKNKIIYEDGSVQKITEVPDDLKAIYKTVWEIKQKTIVDMAIDRGCY
IDQSQSLNIHMEQPNSGKLTSLHFHGWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ
PTSEEEDAQVKMAQVACSLNNREECLACGS

Transcript Sequence

Transcript ID

EES05976
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:66803861:66808809:1 gene:SORBI_3004G336100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AACCTTGCCCAATTTCGCTCGAAACGCGCGGGAGAAATTTCCCCTCTCCCGCGCTTCAGG
GCGGTTCTACTTTCTCCCATACATCATTTCACGTCCTTGTCATCTAATCACGTCGCGATC
ACCGATTTCTCGAAGCATTTAAACCTCTCGCTGCCCCTTTCTCCGTTGCTCTCCCCAATC
CTTAACGATCCCGACTCCCGAGGCCATCACCGCCGCGCTGTTGGGTCGGGCGCCCCCGCC
CCACGGTGTGTTCGACGGAAAGCCCGAGAGGCCCGGCGCCGGCGGCAAAGCAAGATGTAC
GTGGTGAAGCGCGACGGCCGGCAGGAGTCGGTCCACTTCGACAAGATCACCGCGCGGCTC
ACGAGGCTTAGCTACGGCCTCAGCGCGGAGCACTGCGACCCCGTCCTTGTCGCCCAGAAG
GTCTGCGCCGGCGTCTACAAGGGCATCACCACCGGCGAGATTGGTGAGCTCGCCGCCGAG
ACCGCCGCCGCCATGACCACCTCGCATCCCGACTACGCATCGCTGGCGGCGAGGATCGCG
GTCTCCAATCTGCACAAGAACACCATGACGTCCTTTTCAGCGACGGTAAAGGCTCTCTAT
ACGCATTATGACGAGAGGTCTGGTTTGATGGCTCCCCTGATTGCTGATGATGTCTTCACG
ATCATTATGAAGAATACTGCTCGCTTGGAGTGTGAGATAAATTATGACCGAGATTTCGAC
TATGATTATTTTGGTTTTAAGACTCTTCAGAGGTCCTATCTGTTGAAAATTGGTGGAAAG
GTCGCGGAAAGGCCGCAACATATGTTGATGAGAGTTTCTGTCGGCATACATAAGGATGAT
ATTGAATCTGCTATCAAAACATACCACATGATGTCTCAACGCTGGTTTACTCATGCTTCC
CCAACCCTGTTCAACGCTGGCACTCCAAGGCCGCAATTAAGTAGCTGCTTCCTTATCTGC
ATGAAAGATGATAGTATTGAAGGAATTTATGATACTCTCTCAGAATGTGCTGCCATAAGC
AAATCTGCTGGAGGAATTGGTGTCTCAATTCACAATATTCGAGCTACTGGGAGTTATATT
CGAGGAACAAATGGAACTTCTAATGGAATTGTTCCTATGCTACGTGTTTTCAATGATACT
GCCCGTTATGTTGATCAAGGCGGAGGCAAGAGAAAAGGTGCATTTGCTGTTTATTTGGAG
CCTTGGCATCCTGATATCTTTGAGTTCCTTGATCTAAAAAAGAACCATGGAAAGGAGGAG
AATCGTGCAAGGGATCTTTTCTATGCTTTGTGGGTTCCTGATCTATTTATGGAAAGGGTA
CAACATAATGAACAGTGGTCACTATTTTGCCCCAGTGAAGCTCCTGGTCTGGCTGATTGC
TGGGGTGATGAGTTTCAGAATCTGTACCAGAAATATGAAAGAGAAGGCAAGGCAAAGAAA
GTGGTTGCAGCGCAGGCCCTCTGGTTCGATATTTTAAAGGCACAGATAGAAACTGGAACT
CCCTATATGCTTTACAAGGATGCTTGCAACAGAAAAAGTAACCAACAAAATCTTGGCACA
ATTAAGTCCTCCAACTTGTGTACTGAGATAATTGAGTATACAAGTCCTTCTGAAACTGCT
GTGTGCAATCTTGCGTCAATTGCTTTACCACGTTTTGTGAGGGAAAAGGGTGTTCCTATA
GAATCTCATCCAGCTAAGCTTGTTGGTAGCAGCGGATCGAAAAATAGATACTTTGACTTT
GATAAATTAGCTGAGATTACTTCAATTGTTACATGTAATCTCAACAAAATCATTGATATT
AGCTATTATCCCATTGAGAATGCAAGGAGGTCAAATATGAGGCATAGACCAATTGGGATA
GGCGTTCAAGGCTTGGCAGATACTTTTATTCTACTTGGAATGCCATTTGATTCACCAGAG
GCCCAGCAGTTAAATAAAGATATTTTTGAAACTATTTATTATCACTCGTTGAAAGCTTCT
GCTGAACTTGCTGCAAAAGAAGGCCCTTATGAAACATATGCTGGGAGCCCTGTCAGCAAG
GGCATTCTTCAACCTGATATGTGGAATGTAGTGCCATCTAGTAGGTGGAACTGGTCAGCA
ATAAGGGAAATGATTTCTCAGGTGGGATTGAGGAACTCTCTTCTTGTTGCTCCTATGCCA
ACTGCTTCCACTAGTCAAATTCTTGGCAACAATGAGTGCTTTGAACCATACACCTCAAAT
ATATACAGTCGACGAGTTTTGAGCGGTGAATTTGTTGTAGTAAATAAGCATCTTCTCCAT
GATTTGAGTGAGATGGGTGTCTGGTCTCCTGTTCTAAAGAACAAGATTATCTATGAGGAT
GGTTCTGTCCAAAAAATTACCGAAGTTCCAGATGATCTAAAAGCAATTTACAAGACTGTT
TGGGAGATCAAGCAGAAAACTATTGTTGACATGGCCATTGACCGTGGTTGCTATATCGAT
CAGAGCCAGAGCCTTAATATCCACATGGAACAACCAAACTCTGGGAAGCTAACTTCATTG
CACTTCCATGGTTGGTCAAAGGGCCTCAAAACAGGGATGTATTACTTAAGAACTCGAGCT
GCTGCTGATGCAATCAAGTTTACAGTTGATACTACTCTTCTCAAGGATAAGCAGCCGACT
TCAGAAGAAGAGGATGCCCAGGTTAAAATGGCACAAGTGGCCTGTTCCTTGAACAACCGG
GAGGAGTGCTTAGCATGTGGAAGTTAGATTCATCTGAATTGCAGATCGTGCTACTAGTTC
CATATATATAGCATTAAATTACAACAAAGGTTCCCTGCCTGTGTATGAACTTCGATTTGT
GAGAAGAACCAAGCAAAGCCTTGTTTGCAGAACTTTAGCGTGGAATTGTACTCATGCTTA
GGCTATTGTAAATATATATGTTATATGTATCTATCTACTATATATATTCAAGTGTGGTGT
ACAAGTTCC