Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05942
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:66206758:66209737:1 gene:SORBI_3004G327200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGACGCCCCCAGCGCCACTGGCATCTCTCCTCCTCCGCGTCTCCGCGGCCGCCGTT
GCCGTGGCTCCACGTCGCAAGAGCCCCGCGACGGCGGCCGCCGCACGGTGGGCGGGAGGT
GGGGGCAGGAGGAGGACGAGGACGAGGAGGTGCCGGGCGGCGGTGGTGGAGGAGGCCGGG
GTGCTGCTGCCCAAGGAGGGGGAAGGGGAGGAGGCCGCGGAGGCGGCGGCGGCGGCGGGA
CGCTACGACTGGAAGGAGGAGTGGTACCCGCTATATCTGTCCAAGGAGGTGCCGGACGAC
GCGGCGCTCCCGCTCACCGTCTTCGACCGCCAGCTCGTGCTCTGGCGCGACGGCAACGGC
GTGCTCCGCTGCCACGAGGACCGGTGCCCTCACAGGTTAGCGAAGCTGTCGGAAGGGCAG
ATCGTGGACGGCAAGCTGGAGTGCCTTTACCATGGCTGGCAGTTCGACGGCGAGGGCAAG
TGCGTCAAGATACCACAGCTGCCCGAGGGCGCCAAGATCCCGCGGAGCGCGTGCGCGCGC
AACTACGAGGTGCGGGACTCGCAGGGCGTGGTGTGGGTGTGGGTGTCGGACGCCAACCCT
CCCGACGAGGGGAAGCTGCCGTGGTTCGAGCCGTACGCGCGGGCGGGGTTCACGGACCTG
TCGACGGTGCACGAGCTCCCCTACGACCACTCCATCCTGCTGGAGAACCTCATGGACCCG
GCGCACGTGCCCATCTCCCACGACCGCACCGACTGGACGGCCAAGCGCGAGGACGCGCAG
CCGCTCTTCTTCGACGTCACCGAGCGCACCCCGCGCGGCTTCGCGGGTTACTGGGGCCGC
ACCAGCACGCCGCACCTCCGCAACCTGCTCCGCTTCGAGGCGCCCTGCGTGCTCACCAAC
ACGCTCGAGTACACCGACAAGGACGGCACGGAGCAGTGCTTCTCCGCGCACTTCCTCTGC
CGCCCCGCTGGGCAGGGGAAGTCCATGCTCCTCGTCCGCTTCGGATCCACCCTCAGGTCG
CCGCTCGCCAAGGTGCTCCCGACCTGGTACTTCCACCAGAACGCGTGCAAGGTGTTCGAG
CAGGACATGGGGTTCCTGTCGTCGCAGAACGAGGTGCTGCTCCGGGAGAAGGTGCCCACC
AGGGAGCTCTACCTCAACCTCCGCTCCTCCGACACCTGGGTCGCCGAGTACAGGAAGTGG
ATGGACAGGGCCGGCCACGGCATGCCCTACTACTTCGGCCACACCACCCTGTCGCCACCG
CCGGTCCCGGCCGTCGTGGAGCAGGCGCCCGCGGGGGCCGTCGCGGGGATCTCGGCCTCG
TTCCCGGCAAAGGGCGGCGTCGGCACGGTGCACGCGCCCAACCCGACCAACAGGTACTTC
CGCCACGTCGTGCACTGCAAGGGCTGCAGGGCGACCGTCAAGAAGTACACCTCGTTGAAG
AACGCGTTCGCCGCACTCGCAGCGGCGGCCGTGGCGGCGGCCGTCCTGGCGGCGACCAGG
CAGTGGAAGGCCGTCTTGCTGGCTGCATCGGCCGTGCTAGCCGCGGCGTCCTATGCCTGT
GACGCGCTGGTTTCTTTGCTCACCACCAACTTCATCAGGACACACAGGAGATTGTAA

Peptide Sequence

PEP ID

EES05942
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:66206758:66209737:1 gene:SORBI_3004G327200 transcript:EES05942 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTTPPAPLASLLLRVSAAAVAVAPRRKSPATAAAARWAGGGGRRRTRTRRCRAAVVEEAG
VLLPKEGEGEEAAEAAAAAGRYDWKEEWYPLYLSKEVPDDAALPLTVFDRQLVLWRDGNG
VLRCHEDRCPHRLAKLSEGQIVDGKLECLYHGWQFDGEGKCVKIPQLPEGAKIPRSACAR
NYEVRDSQGVVWVWVSDANPPDEGKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDP
AHVPISHDRTDWTAKREDAQPLFFDVTERTPRGFAGYWGRTSTPHLRNLLRFEAPCVLTN
TLEYTDKDGTEQCFSAHFLCRPAGQGKSMLLVRFGSTLRSPLAKVLPTWYFHQNACKVFE
QDMGFLSSQNEVLLREKVPTRELYLNLRSSDTWVAEYRKWMDRAGHGMPYYFGHTTLSPP
PVPAVVEQAPAGAVAGISASFPAKGGVGTVHAPNPTNRYFRHVVHCKGCRATVKKYTSLK
NAFAALAAAAVAAAVLAATRQWKAVLLAASAVLAAASYACDALVSLLTTNFIRTHRRL

Transcript Sequence

Transcript ID

EES05942
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:66206758:66209737:1 gene:SORBI_3004G327200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAACTCGCCACTTGGTCACTTGGACGAGTGGACGACAGTGACACGATACATGACGGGA
AGTGGAAAAAGTCTGGAACCGGGACGCTCTAGTAGTAGGTGGCAGCTACGCCAGAGCCGT
GAGCCGTGTGCCGTGTGCCGTGTGCGTTGCACGCGACTCGTGTAGTCGTGTAAAGGGTTT
TATCCGGAGAAGAATGCCGCAGAGATCGAGCGCTGTCGGCCAACCAAACGCAAAGTGGGA
CCAAACATGACGACGCCCCCAGCGCCACTGGCATCTCTCCTCCTCCGCGTCTCCGCGGCC
GCCGTTGCCGTGGCTCCACGTCGCAAGAGCCCCGCGACGGCGGCCGCCGCACGGTGGGCG
GGAGGTGGGGGCAGGAGGAGGACGAGGACGAGGAGGTGCCGGGCGGCGGTGGTGGAGGAG
GCCGGGGTGCTGCTGCCCAAGGAGGGGGAAGGGGAGGAGGCCGCGGAGGCGGCGGCGGCG
GCGGGACGCTACGACTGGAAGGAGGAGTGGTACCCGCTATATCTGTCCAAGGAGGTGCCG
GACGACGCGGCGCTCCCGCTCACCGTCTTCGACCGCCAGCTCGTGCTCTGGCGCGACGGC
AACGGCGTGCTCCGCTGCCACGAGGACCGGTGCCCTCACAGGTTAGCGAAGCTGTCGGAA
GGGCAGATCGTGGACGGCAAGCTGGAGTGCCTTTACCATGGCTGGCAGTTCGACGGCGAG
GGCAAGTGCGTCAAGATACCACAGCTGCCCGAGGGCGCCAAGATCCCGCGGAGCGCGTGC
GCGCGCAACTACGAGGTGCGGGACTCGCAGGGCGTGGTGTGGGTGTGGGTGTCGGACGCC
AACCCTCCCGACGAGGGGAAGCTGCCGTGGTTCGAGCCGTACGCGCGGGCGGGGTTCACG
GACCTGTCGACGGTGCACGAGCTCCCCTACGACCACTCCATCCTGCTGGAGAACCTCATG
GACCCGGCGCACGTGCCCATCTCCCACGACCGCACCGACTGGACGGCCAAGCGCGAGGAC
GCGCAGCCGCTCTTCTTCGACGTCACCGAGCGCACCCCGCGCGGCTTCGCGGGTTACTGG
GGCCGCACCAGCACGCCGCACCTCCGCAACCTGCTCCGCTTCGAGGCGCCCTGCGTGCTC
ACCAACACGCTCGAGTACACCGACAAGGACGGCACGGAGCAGTGCTTCTCCGCGCACTTC
CTCTGCCGCCCCGCTGGGCAGGGGAAGTCCATGCTCCTCGTCCGCTTCGGATCCACCCTC
AGGTCGCCGCTCGCCAAGGTGCTCCCGACCTGGTACTTCCACCAGAACGCGTGCAAGGTG
TTCGAGCAGGACATGGGGTTCCTGTCGTCGCAGAACGAGGTGCTGCTCCGGGAGAAGGTG
CCCACCAGGGAGCTCTACCTCAACCTCCGCTCCTCCGACACCTGGGTCGCCGAGTACAGG
AAGTGGATGGACAGGGCCGGCCACGGCATGCCCTACTACTTCGGCCACACCACCCTGTCG
CCACCGCCGGTCCCGGCCGTCGTGGAGCAGGCGCCCGCGGGGGCCGTCGCGGGGATCTCG
GCCTCGTTCCCGGCAAAGGGCGGCGTCGGCACGGTGCACGCGCCCAACCCGACCAACAGG
TACTTCCGCCACGTCGTGCACTGCAAGGGCTGCAGGGCGACCGTCAAGAAGTACACCTCG
TTGAAGAACGCGTTCGCCGCACTCGCAGCGGCGGCCGTGGCGGCGGCCGTCCTGGCGGCG
ACCAGGCAGTGGAAGGCCGTCTTGCTGGCTGCATCGGCCGTGCTAGCCGCGGCGTCCTAT
GCCTGTGACGCGCTGGTTTCTTTGCTCACCACCAACTTCATCAGGACACACAGGAGATTG
TAATTAAGGTGTCTTATAATGGCTGCTGTATGTTTAGGTATATAGAAAAATGGCGGGAAG
CGTCCTCTTCTCCCTTTACATTTGTATATCACCGTAGCTGTATTTGTAGTAACGTTTTGC
ATGCTTGCAGCAGCTGATTAGGTGGTTGCTGGTTAGGACTTTTACTCCTGCGCTAAACTC
ACAATCACAAGAGATAATCAACATAGCCTTAATTGCAGAACCGCACATATGAGATTAAAT
CTGCAGAGTCACAGTCAGCAAGTCATGAATTTCTGACCAACCAATCGATATGCAACACGC
TCACATGGTGGCATTCGTAAAATCCAATCCAGGATAGGCAACCAGACTCCAATATATATA
CACAATACAAGCAGCACACATTCACTGTTCAGAGTGTGGCACAATGCCTAATGTCACATG
TTATTAAGTAGACAAACTTGATAGCAGTGGACAAACACTGACTTCTTGTCATCCATGCTC
AGAGCACGTGTAAGACAATACACTTGATAGGATAGATTAGCTACCGCAGTGAAACGATTG
ATGCTCCAGGCTTGCCGTGGTTGATCTAGAATTCCCTGTCGGGGAAGAGGATGGGTGCAA
CAAGCGACCATATGAACAGACCTGCCGTCGCCCACTGGGTTGCAATTCTGACCCAGACAG
ATGGCCACCCAACATCAACAAGCTTTCCGCTCTCACCAACGGAAGTTGACCAGCCAGTCA
AGAGCATTGCCGAGTACATGCTGGCCAGGGAGAAGATGAGGTGAAAGAAAGAGTAGGAGT
ATGTCACCGGCCTTGGTACATCCTTCTTATCTTCTTGTTCATCTGCCTTGCTGAAGGGAA
GCAATGGCTTGTCGGTTCCTG