Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05938
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:66148318:66155045:1 gene:SORBI_3004G326600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGATCACAGCGACGACCCCCGACATCCTCGGCGAGCGCCAGTCCGGTCAGGACGTC
CGCACGCAGAACGTGATGGCGTGTGGGGCGGTGGCCAACATCGTGAAATCCTCGCTCGGC
CCCGTCGGACTCGACAAGATGCTAGTGGACGATATTGGTGATGTTACAATCACTAATGAT
GGAGCAACCATACTTAAGATGTTGGAAGTTGAGCACCCAGCTGCCAAGGTTCTTGTTGAG
TTGGCTGAGCTCCAAGACCGTGAGGTAGGAGATGGAACAACTTCTGTTGTTATCATAGCA
GCGGAGTTGCTCAAGAGAGGCAACGATCTTGTGAAGAATAAGATCCATCCAACCTCTATA
ATCAGTGGCTACAGGCTTGCTATGCGTGAAGCCTGCAAATATGTTGAGGAAAAGTTGGCA
GTCAAGGTTGACAAACTTGGAAAAGACTCCCTTATCAACTCTGCAAAAACTAGCATGTCT
TCGAAATTGATTAATAGTGACAGTGATTTCTTTGCAACTCTGGTTGTTGAAGCTGTCCAG
GCTGTGAAGACTACAAATGCCAAGGGAGAAGTGAAATATCCAATCAAGAGCATCAATATT
TTGAAAGCTCATGGTAAAAGCGCCAAGGATAGTTACCTGCTAAATGGCTACGCACTAAAC
ACAGGCCGTGCAGCTCAAGGAATGCCTACAAGAGTAACTCCTGCTAGAATTGCTTGTCTT
GATTTTAATCTTCAGAAGACAAAAATGCAACTTGGTGTCCAAGTTCTCGTAACTGATCCA
AGGGAGCTTGAGAAGATTCGTCAGAGAGAATCTGACATAATGAAGGAGCGAATTGAGAAA
ATTCTCAAGGCTGGAGCTAATGTTGTGTTGACCACCAAGGGAATTGATGATATGTCCTTG
AAGTACTTTGTTGAGGCTGGAGCGATTGCAGTAAGGCGTGTGCGCAAGGAAGATTTGCGC
CATGTTGCCAAAGCCACTGGTGCAACTATGGTGAGTACATTTGCAGACATGGAGGGTGAA
GAAACATTTGATGCATCATTCCTTGGACATGCTGATGAAGTTGTGGAGGAAAGAATTGCT
GATGATGATGTTATTCTGGTGAAAGGCACAAAGAACACTAGCGCGGTCTCTATAATACTT
AGAGGTGCAAATGACTTCATGCTTGATGAGATTGACCGGTCCTTGCATGATGCCCTGTGC
ATTGTGAAGAGAACCCTGGAATCAAATATGGTTGTTGCTGGTGGTGGTGCAGTTGAGGCT
GCGTTGTCAGTTTACCTGGAGAACCTTGCAACGACCCTAGGTTCTCGGGAACAACTGGCA
ATTGCTGAATTTGCTGAATCTTTGTTAATCATACCAAAGGTACTATCTGTTAATGCTGCA
AAAGATGCAACTGAGCTTGTAGCAAAGCTTAGGGCATATCATCATACTGCTCAAACAAAG
GCCGATAAGCAACATTATTCAAGTATGGGTCTTGACCTCTCCAAAGGTATCATTCGCAAC
AACCTTGAGTATGGCGTGATAGAGCCATCAATGAGTAAAGTGAAGATTATTCAGTTTGCT
ACGGAGGCTGCCATTACAATCCTGAGGATTGACGACATGATCAAGCTTACCAAGGAAGAG
GGTAACGAAGAAGAGTAA

Peptide Sequence

PEP ID

EES05938
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:66148318:66155045:1 gene:SORBI_3004G326600 transcript:EES05938 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAITATTPDILGERQSGQDVRTQNVMACGAVANIVKSSLGPVGLDKMLVDDIGDVTITND
GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVKNKIHPTSI
ISGYRLAMREACKYVEEKLAVKVDKLGKDSLINSAKTSMSSKLINSDSDFFATLVVEAVQ
AVKTTNAKGEVKYPIKSINILKAHGKSAKDSYLLNGYALNTGRAAQGMPTRVTPARIACL
DFNLQKTKMQLGVQVLVTDPRELEKIRQRESDIMKERIEKILKAGANVVLTTKGIDDMSL
KYFVEAGAIAVRRVRKEDLRHVAKATGATMVSTFADMEGEETFDASFLGHADEVVEERIA
DDDVILVKGTKNTSAVSIILRGANDFMLDEIDRSLHDALCIVKRTLESNMVVAGGGAVEA
ALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTK
ADKQHYSSMGLDLSKGIIRNNLEYGVIEPSMSKVKIIQFATEAAITILRIDDMIKLTKEE
GNEEE

Transcript Sequence

Transcript ID

EES05938
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:66148318:66155045:1 gene:SORBI_3004G326600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCTCCCCGCAAGTCACAAAACCTCATTTGAGCGTGCGAGCTCTTTCGCCTCGAACCCTC
TCACGCTTGCCTCCGCGCTCCAGTGCTCCCCTCCCACCTCGCCGCCGCAGCAGCCATGGC
GATCACAGCGACGACCCCCGACATCCTCGGCGAGCGCCAGTCCGGTCAGGACGTCCGCAC
GCAGAACGTGATGGCGTGTGGGGCGGTGGCCAACATCGTGAAATCCTCGCTCGGCCCCGT
CGGACTCGACAAGATGCTAGTGGACGATATTGGTGATGTTACAATCACTAATGATGGAGC
AACCATACTTAAGATGTTGGAAGTTGAGCACCCAGCTGCCAAGGTTCTTGTTGAGTTGGC
TGAGCTCCAAGACCGTGAGGTAGGAGATGGAACAACTTCTGTTGTTATCATAGCAGCGGA
GTTGCTCAAGAGAGGCAACGATCTTGTGAAGAATAAGATCCATCCAACCTCTATAATCAG
TGGCTACAGGCTTGCTATGCGTGAAGCCTGCAAATATGTTGAGGAAAAGTTGGCAGTCAA
GGTTGACAAACTTGGAAAAGACTCCCTTATCAACTCTGCAAAAACTAGCATGTCTTCGAA
ATTGATTAATAGTGACAGTGATTTCTTTGCAACTCTGGTTGTTGAAGCTGTCCAGGCTGT
GAAGACTACAAATGCCAAGGGAGAAGTGAAATATCCAATCAAGAGCATCAATATTTTGAA
AGCTCATGGTAAAAGCGCCAAGGATAGTTACCTGCTAAATGGCTACGCACTAAACACAGG
CCGTGCAGCTCAAGGAATGCCTACAAGAGTAACTCCTGCTAGAATTGCTTGTCTTGATTT
TAATCTTCAGAAGACAAAAATGCAACTTGGTGTCCAAGTTCTCGTAACTGATCCAAGGGA
GCTTGAGAAGATTCGTCAGAGAGAATCTGACATAATGAAGGAGCGAATTGAGAAAATTCT
CAAGGCTGGAGCTAATGTTGTGTTGACCACCAAGGGAATTGATGATATGTCCTTGAAGTA
CTTTGTTGAGGCTGGAGCGATTGCAGTAAGGCGTGTGCGCAAGGAAGATTTGCGCCATGT
TGCCAAAGCCACTGGTGCAACTATGGTGAGTACATTTGCAGACATGGAGGGTGAAGAAAC
ATTTGATGCATCATTCCTTGGACATGCTGATGAAGTTGTGGAGGAAAGAATTGCTGATGA
TGATGTTATTCTGGTGAAAGGCACAAAGAACACTAGCGCGGTCTCTATAATACTTAGAGG
TGCAAATGACTTCATGCTTGATGAGATTGACCGGTCCTTGCATGATGCCCTGTGCATTGT
GAAGAGAACCCTGGAATCAAATATGGTTGTTGCTGGTGGTGGTGCAGTTGAGGCTGCGTT
GTCAGTTTACCTGGAGAACCTTGCAACGACCCTAGGTTCTCGGGAACAACTGGCAATTGC
TGAATTTGCTGAATCTTTGTTAATCATACCAAAGGTACTATCTGTTAATGCTGCAAAAGA
TGCAACTGAGCTTGTAGCAAAGCTTAGGGCATATCATCATACTGCTCAAACAAAGGCCGA
TAAGCAACATTATTCAAGTATGGGTCTTGACCTCTCCAAAGGTATCATTCGCAACAACCT
TGAGTATGGCGTGATAGAGCCATCAATGAGTAAAGTGAAGATTATTCAGTTTGCTACGGA
GGCTGCCATTACAATCCTGAGGATTGACGACATGATCAAGCTTACCAAGGAAGAGGGTAA
CGAAGAAGAGTAAGCAGCCCACCCGTAGGAGGGTAGTGGACTCTTGTGTGATGGTTGTCA
TAGCGTGTAACATTTCTTTTAAATTTTTCGTTTAGCTTTTGCTAGCTGTGGCCTGTGGGC
ATTCGTGTAGGTTGTTGTAGGAAAACTGGATGTGTATCAGTGTATCCCTGTGGGGGTGAC
GATGACTCACGGATGGATCAAATTTTGCGTATATTGGGGGCCAAAACAGTTCTATTTCAA
GGATTTAAGTTGCAA