Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05906
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:65571716:65580531:1 gene:SORBI_3004G321100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCAGGACGCGGACCGCGCTTGCCTGCAGAGCTTCGAGCTCCACGAGAGCGAGTCG
AGACTTTATGTTCTAGGAACTAATTCTGACAGAACACTTTGGAGATTACTCAAGATCGAT
AGATCAGAGCCGTCAGAGCTTGTGATCGATGAGTGTTCTACTGTATATACTGAAAGTGAA
CATCCTGACTTGTTGAAGGGTCTTGATGAAGAGCACAGGTCAACTGGCGGAATAAAATTT
GTTACAAAGTTTTATGGCATAATTGGTTTCATCAAATTCCTTGGGCCATATTACATGTTG
ATTATTACCGAGCAGAAAAGAATTGGGGAAATCTTTGGTCATCCAGTCTACCAGGTGACT
AGGACTTCAATGGTTGAGTTAGCAAATTCTAAGACAAGATCTACTTTTCAAAACTCCAAG
GATGAGAACAGATACAGGAAGATCTTGAATGCACTTGATCTTAGGAAGGATTTCTTTTTC
AGTTACTCATACCACATTATGAGAAGTCTTCAGAAGAACTTGACTGATCCACAGGATGGA
TGGACCTTATACGAGACAATCTTTGTCTGGAATGAGTATCTGACACGACGGATCCGTAAT
TGTCTGAGAAATACTTTGTGGACTGTTGCATTAGTCCATGGTTTCTTTAGGCAGGATAAA
TTCTCAATATCTGGCAAGGATATTATTCTCACACTCATTGCTAGACGATCGAGACATTAT
GCTGGAACCAGATATTTAAAGAGGGGGGTGAATGAGAAGGGAAGAGTAGCAAATGATGTT
GAGACTGAGCAAATTGTCTATGAAGCTGTGCCTGGACCTACTGAAGTAAGTTCTGTTGTG
CAGAACAGGGGTTCAATTCCACTATTCTGGTCACAGGAGACATCAAAATTGAATATTAAA
CCTAATATAATATTGCATGAGATGCAGAATAATTATGAAGCTACCAAGCTTCATTTTGAA
AATCTTAGAGCAAGATATGGAAACCCTATCATTATCTTAAACTTGATTAAGACACGGGAG
AGGCGAGAGTCTATACTCCGCCGAGAATTTGATAAGGCGATCAAAATAATAAACAAGAGC
CTGTCAGAAGAGAATCATCTGAGGTTCTTACATTGGGATCTTCATCAAAACTCTCAAGGA
AAACCTACAAATGTACTCGATGTCCTTCTGAAAGTGGCATTTCGGGCTCTGAATTTGACC
GACTTCTTCTATTGTCAAGTCGCACCAAGTTCTGAGACTTCCGCACAATGGCCCACTCTA
TTGAATGGTCTTGATCCATATTTATGTGATGACAACAATAGTGACGACACTGAATGCACT
GAGATTGTTGGTGATGTATCCCAAGAGGATATCTCTGGCAGCTCTGATTCCTCTGGTAAT
GCAACTGCAGAAGACAAATTTGAGAATAGTGGACCGCCACCGCCAAAACCGCCAAAATTC
CAAAAAGGTGTCTTACGGACAAACTGTATAGATTGCCTGGATCGTACAAATGTTGCTCAG
TATGCATATGGTTTAGCTGCTCTTGGACATCAACTGCATGCACTTGGTTCTATAGAATCT
CCGGAACTAGGTTTAGAAGCTCCCTTGGCCCATCATTTGATGCACTTTTATGAGAGGATG
GGTGACACGCTTGCTGTACAGTATAGCGGTTCTGCTGCTCATAACAAGGTATTCTCTGCA
AGGAGAGGTCACTTGAAGCTTTTTATTCAGTCACAAGAGTTCTTTAGGACACTTCAGCGG
CACTACAGCAACACCTGTATAGATGCTAACAAACAGGCTGCTATAAACTTGTTTTTGGGA
TACTTCCAGCCACAGCAGGGAAAACCTGCACTATGGGAGTTAGAGTCATCTTCTGGTGAG
CATAACAATGATCTTTTTGATGACCACCCAAGTACATTGAAAAGAGTAAAATCAGATGGC
ACCATTCTTCATGAAAGCAATGCTTCTATATCTGGCTCTGGTCATTGCCATAATGAACCG
TTGAGTGCATTGCAGCCTGATGTCCAGAATGGGTTTCAATTCCCAACTTCAGAATCTGAT
TCATTTCATGAAAATGAAATTTCGTCAGCCTGTGGAAGTGGAGTATCACACCTAAGGTAT
ACTCCTACAGCCTCTGATGTGCTTCATGTCCCAAGAGCTGAAGTTGAATATTGCCATGAT
TCTGGTGATTCAAACTTTCTGGATCTTGAATGGCTTTCCACTTCAGGCAACTCAAGTGAT
GAAAGGTCTATTGCAACTAGCACGCCTGCGAACCTATCAACTGAGAATGTCATTAGTGGC
ATAGCTCCTTACATCATGGAAAACCATCTTGCTGAAATTCAGTCTCAGAAGCTACCTCAG
AGTTTTGTGCAGTGGGTTAATGACACTGATACCTTTTGGTATTAA

Peptide Sequence

PEP ID

EES05906
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:65571716:65580531:1 gene:SORBI_3004G321100 transcript:EES05906 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEQDADRACLQSFELHESESRLYVLGTNSDRTLWRLLKIDRSEPSELVIDECSTVYTESE
HPDLLKGLDEEHRSTGGIKFVTKFYGIIGFIKFLGPYYMLIITEQKRIGEIFGHPVYQVT
RTSMVELANSKTRSTFQNSKDENRYRKILNALDLRKDFFFSYSYHIMRSLQKNLTDPQDG
WTLYETIFVWNEYLTRRIRNCLRNTLWTVALVHGFFRQDKFSISGKDIILTLIARRSRHY
AGTRYLKRGVNEKGRVANDVETEQIVYEAVPGPTEVSSVVQNRGSIPLFWSQETSKLNIK
PNIILHEMQNNYEATKLHFENLRARYGNPIIILNLIKTRERRESILRREFDKAIKIINKS
LSEENHLRFLHWDLHQNSQGKPTNVLDVLLKVAFRALNLTDFFYCQVAPSSETSAQWPTL
LNGLDPYLCDDNNSDDTECTEIVGDVSQEDISGSSDSSGNATAEDKFENSGPPPPKPPKF
QKGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGSIESPELGLEAPLAHHLMHFYERM
GDTLAVQYSGSAAHNKVFSARRGHLKLFIQSQEFFRTLQRHYSNTCIDANKQAAINLFLG
YFQPQQGKPALWELESSSGEHNNDLFDDHPSTLKRVKSDGTILHESNASISGSGHCHNEP
LSALQPDVQNGFQFPTSESDSFHENEISSACGSGVSHLRYTPTASDVLHVPRAEVEYCHD
SGDSNFLDLEWLSTSGNSSDERSIATSTPANLSTENVISGIAPYIMENHLAEIQSQKLPQ
SFVQWVNDTDTFWY

Transcript Sequence

Transcript ID

EES05906
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:65571716:65580531:1 gene:SORBI_3004G321100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCGGGCGGGCGATCCGGCCGGGGCCGGCCGCGGGCGGCCGCCATGGAGCAGGACGCGGA
CCGCGCTTGCCTGCAGAGCTTCGAGCTCCACGAGAGCGAGTCGAGACTTTATGTTCTAGG
AACTAATTCTGACAGAACACTTTGGAGATTACTCAAGATCGATAGATCAGAGCCGTCAGA
GCTTGTGATCGATGAGTGTTCTACTGTATATACTGAAAGTGAACATCCTGACTTGTTGAA
GGGTCTTGATGAAGAGCACAGGTCAACTGGCGGAATAAAATTTGTTACAAAGTTTTATGG
CATAATTGGTTTCATCAAATTCCTTGGGCCATATTACATGTTGATTATTACCGAGCAGAA
AAGAATTGGGGAAATCTTTGGTCATCCAGTCTACCAGGTGACTAGGACTTCAATGGTTGA
GTTAGCAAATTCTAAGACAAGATCTACTTTTCAAAACTCCAAGGATGAGAACAGATACAG
GAAGATCTTGAATGCACTTGATCTTAGGAAGGATTTCTTTTTCAGTTACTCATACCACAT
TATGAGAAGTCTTCAGAAGAACTTGACTGATCCACAGGATGGATGGACCTTATACGAGAC
AATCTTTGTCTGGAATGAGTATCTGACACGACGGATCCGTAATTGTCTGAGAAATACTTT
GTGGACTGTTGCATTAGTCCATGGTTTCTTTAGGCAGGATAAATTCTCAATATCTGGCAA
GGATATTATTCTCACACTCATTGCTAGACGATCGAGACATTATGCTGGAACCAGATATTT
AAAGAGGGGGGTGAATGAGAAGGGAAGAGTAGCAAATGATGTTGAGACTGAGCAAATTGT
CTATGAAGCTGTGCCTGGACCTACTGAAGTAAGTTCTGTTGTGCAGAACAGGGGTTCAAT
TCCACTATTCTGGTCACAGGAGACATCAAAATTGAATATTAAACCTAATATAATATTGCA
TGAGATGCAGAATAATTATGAAGCTACCAAGCTTCATTTTGAAAATCTTAGAGCAAGATA
TGGAAACCCTATCATTATCTTAAACTTGATTAAGACACGGGAGAGGCGAGAGTCTATACT
CCGCCGAGAATTTGATAAGGCGATCAAAATAATAAACAAGAGCCTGTCAGAAGAGAATCA
TCTGAGGTTCTTACATTGGGATCTTCATCAAAACTCTCAAGGAAAACCTACAAATGTACT
CGATGTCCTTCTGAAAGTGGCATTTCGGGCTCTGAATTTGACCGACTTCTTCTATTGTCA
AGTCGCACCAAGTTCTGAGACTTCCGCACAATGGCCCACTCTATTGAATGGTCTTGATCC
ATATTTATGTGATGACAACAATAGTGACGACACTGAATGCACTGAGATTGTTGGTGATGT
ATCCCAAGAGGATATCTCTGGCAGCTCTGATTCCTCTGGTAATGCAACTGCAGAAGACAA
ATTTGAGAATAGTGGACCGCCACCGCCAAAACCGCCAAAATTCCAAAAAGGTGTCTTACG
GACAAACTGTATAGATTGCCTGGATCGTACAAATGTTGCTCAGTATGCATATGGTTTAGC
TGCTCTTGGACATCAACTGCATGCACTTGGTTCTATAGAATCTCCGGAACTAGGTTTAGA
AGCTCCCTTGGCCCATCATTTGATGCACTTTTATGAGAGGATGGGTGACACGCTTGCTGT
ACAGTATAGCGGTTCTGCTGCTCATAACAAGGTATTCTCTGCAAGGAGAGGTCACTTGAA
GCTTTTTATTCAGTCACAAGAGTTCTTTAGGACACTTCAGCGGCACTACAGCAACACCTG
TATAGATGCTAACAAACAGGCTGCTATAAACTTGTTTTTGGGATACTTCCAGCCACAGCA
GGGAAAACCTGCACTATGGGAGTTAGAGTCATCTTCTGGTGAGCATAACAATGATCTTTT
TGATGACCACCCAAGTACATTGAAAAGAGTAAAATCAGATGGCACCATTCTTCATGAAAG
CAATGCTTCTATATCTGGCTCTGGTCATTGCCATAATGAACCGTTGAGTGCATTGCAGCC
TGATGTCCAGAATGGGTTTCAATTCCCAACTTCAGAATCTGATTCATTTCATGAAAATGA
AATTTCGTCAGCCTGTGGAAGTGGAGTATCACACCTAAGGTATACTCCTACAGCCTCTGA
TGTGCTTCATGTCCCAAGAGCTGAAGTTGAATATTGCCATGATTCTGGTGATTCAAACTT
TCTGGATCTTGAATGGCTTTCCACTTCAGGCAACTCAAGTGATGAAAGGTCTATTGCAAC
TAGCACGCCTGCGAACCTATCAACTGAGAATGTCATTAGTGGCATAGCTCCTTACATCAT
GGAAAACCATCTTGCTGAAATTCAGTCTCAGAAGCTACCTCAGAGTTTTGTGCAGTGGGT
TAATGACACTGATACCTTTTGGTATTAAGATCGCAATTATTCAGTGATATGTCGCCAGCT
ACCTAGAAGACCCAGTTTCCCAGGGTGGTATTAAGACGGATCTGAGTAGTAGATTAGAGA
GTGATGGACGGTAGTCAAGGCATTTCTCCTGTGATATACTTCGCACCATCGGAGTCATTT
AGGGAATCATTATTGGTTCACATGTTTTTACTACGAGCGAGTAGATAGATATGTTTCTTT
TGAAAGAAAATAGAGATGATAGTTAGGCTTATTATTGTTGACCTGAAACTGTATCATTAT
TCATGGGAACATGCCATTTTTCTTGTGTAAATATATATGCTTGAGGTTCCTTTGGTGGGT
TGTGAGGAACACACTACTTTTGTTTCC