Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05543
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:58992214:58998726:1 gene:SORBI_3004G241900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGATCCCTCCTCCGCCTCCAACAAGCGGAAGCGCAAGCGGGGGCGCAAGCGCAAG
GCGTCCCCGCCCTCCCCCGACCGTTCCTCCCCCTCACCGGCGGCCGCACCCGCTCCGGCT
GGGCGCCGTGGCCGCAAGCCGCGCCGTAATGAGGCCCCCGCGGACGCGGACGCCGCGCGT
CCGCCGTCCCCGCCCCGCCGCGGGGAGCCGAAACCGGTGGCGAATGGAGGCGATGCGGTG
GCAGTGGCGGTGGCGGAGGCAGGCCCCGCGAGCTGGGATGAGGTGGTCAGGGTGGTGCCG
TGCATGGACGCCGTGGTCAAGGTGTTCTGCGTGCACACGGAGCCCAACTTCTCGCTGCCG
TGGCAGCGGAAGCGGCAGTACAGCTCTAGCAGCAGCGGGTTTATCATCAGCGGCCGCCGT
GTCCTCACCAATGCCCACTCCGTGGAGCACCATACCCAGGTTAAGCTCAAGAAGCGCGGC
TCCGACACCAAGTACCTTGCCACCGTCCTGGCCATCGGCACAGAGTGTGACATTGCACTC
TTAACTGTCAATGACGATGAATTCTGGGAAGGAGTTTCACCTGTCGAGTTTGGAACATTA
CCGGCTCTTCAGGATGCAGTCACTGTTGTCGGTTATCCAATTGGAGGAGATACCATATCT
GTGACAAGCGGAGTGGTCTCTAGGATAGAAATACTTTCGTATGTTCATGGTTCTACAGAA
CTTCTAGGATTGCAGATAGACGCAGCTATTAATTCGGGAAATTCAGGTGGCCCAGCTTTT
AATGATAGGGGCAAATGTGTTGGTATAGCTTTTCAATCTCTTAGGCATGAAGATGCAGAG
AATATAGGTTATGTGATACCAACTCCGGTTATTACACATTTCATTGAGGACTACAAAAAA
TCTGGAGAATACACAGGCTTTCCTATACTTGGAGTTGAATGGCAGAAAATGGAGAATCCT
GATCTCCGCAAAGCAATGGGAATGAAACCAGATCAAAAGGGTGTTCGTGTTAGGAGGGTG
GAGCCCACGGCTCCCGAATCTGGATGCCTACAACCATCTGATATTATTCTTAGCTTTGAT
GGTGTTGACATTGCTAATGATGGAACAGTCCCTTTCAGGCATGGCGAGCGCATTGGCTTC
AGTTATCTGGTTTCTCAGAAATATACTGGCGAGAAAGCCCTTGTTAAGGTTCTGCGTGAT
TCAAAAGTTCATGAATTTAAAATAAGGCTAGCAACTCACAAGCGACTCGTTGCGGCTCAT
GTGAAGGGCAGGCCACCTTCATATTACATAGTTGCTGGCTTTGTTTTTGCAGCTGTCTCT
GTTCCATATCTTCGATCCGAGTACGGAAAAGATTATGAATATGATGCACCTGTCAAGTTG
TTGGTGAAGCATTTGCATGCAATGGCAGAATCACCTGATGAACAGCTTGTGGTGGTATCA
CAGGTGCTTGTATCAGATATCAATATAGGTTATGAAGAAATAGTCAATACCCAGGTTCTT
GCTTTCAATGGTCAGCCTGTAAAAAATTTAAAGAACTTAGCGACCATGGTGGAAAATTGC
AAAGATGAATTTTTGAAGTTTGATCTGGAGTATGACCAGATTGTCGTCCTCGAGACGAAA
ACTGCAAAGGCGGCTACCCAGGACATTCTGACGACGCACTGTATACCTTCTGCAATGTCG
GATGACCTTAAGGCCTAG

Peptide Sequence

PEP ID

EES05543
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:58992214:58998726:1 gene:SORBI_3004G241900 transcript:EES05543 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDDPSSASNKRKRKRGRKRKASPPSPDRSSPSPAAAPAPAGRRGRKPRRNEAPADADAAR
PPSPPRRGEPKPVANGGDAVAVAVAEAGPASWDEVVRVVPCMDAVVKVFCVHTEPNFSLP
WQRKRQYSSSSSGFIISGRRVLTNAHSVEHHTQVKLKKRGSDTKYLATVLAIGTECDIAL
LTVNDDEFWEGVSPVEFGTLPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTE
LLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLRHEDAENIGYVIPTPVITHFIEDYKK
SGEYTGFPILGVEWQKMENPDLRKAMGMKPDQKGVRVRRVEPTAPESGCLQPSDIILSFD
GVDIANDGTVPFRHGERIGFSYLVSQKYTGEKALVKVLRDSKVHEFKIRLATHKRLVAAH
VKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLLVKHLHAMAESPDEQLVVVS
QVLVSDINIGYEEIVNTQVLAFNGQPVKNLKNLATMVENCKDEFLKFDLEYDQIVVLETK
TAKAATQDILTTHCIPSAMSDDLKA

Transcript Sequence

Transcript ID

EES05543
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:58992214:58998726:1 gene:SORBI_3004G241900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATAATAAATCAGCCAATAGTACTTTCTGCCATGACTTATCAGCCAAACGAACAAAGACGA
TTCATAGGCGGTATACAGTATGTTGATATTGAAAACAATACAGCTTCAGGGCTCTCACGT
CTCTTTGGAGTTGCAACCACAAAGCTTGTGGACAATGCAACAAACGTCACGATGCGCATG
AAAACACTCCTGTCTGAAACTCTGAATCGCAGAAATCAATTTTAGAGGTAACCCAGCCCA
TATTATAAAAGGATAGTTTACCATCCAAAATCCGGCCTGCACGGCCCGCGTCGAACCGGT
CCATATTACTCCGACCGGGCCGACCCTCTCCTCCTCTTCCCCGGTTCGGCACTTCGGCCC
CCTCCTCCGCGCCGCGAAACCCTAGCCCGCCTCCATGGACGATCCCTCCTCCGCCTCCAA
CAAGCGGAAGCGCAAGCGGGGGCGCAAGCGCAAGGCGTCCCCGCCCTCCCCCGACCGTTC
CTCCCCCTCACCGGCGGCCGCACCCGCTCCGGCTGGGCGCCGTGGCCGCAAGCCGCGCCG
TAATGAGGCCCCCGCGGACGCGGACGCCGCGCGTCCGCCGTCCCCGCCCCGCCGCGGGGA
GCCGAAACCGGTGGCGAATGGAGGCGATGCGGTGGCAGTGGCGGTGGCGGAGGCAGGCCC
CGCGAGCTGGGATGAGGTGGTCAGGGTGGTGCCGTGCATGGACGCCGTGGTCAAGGTGTT
CTGCGTGCACACGGAGCCCAACTTCTCGCTGCCGTGGCAGCGGAAGCGGCAGTACAGCTC
TAGCAGCAGCGGGTTTATCATCAGCGGCCGCCGTGTCCTCACCAATGCCCACTCCGTGGA
GCACCATACCCAGGTTAAGCTCAAGAAGCGCGGCTCCGACACCAAGTACCTTGCCACCGT
CCTGGCCATCGGCACAGAGTGTGACATTGCACTCTTAACTGTCAATGACGATGAATTCTG
GGAAGGAGTTTCACCTGTCGAGTTTGGAACATTACCGGCTCTTCAGGATGCAGTCACTGT
TGTCGGTTATCCAATTGGAGGAGATACCATATCTGTGACAAGCGGAGTGGTCTCTAGGAT
AGAAATACTTTCGTATGTTCATGGTTCTACAGAACTTCTAGGATTGCAGATAGACGCAGC
TATTAATTCGGGAAATTCAGGTGGCCCAGCTTTTAATGATAGGGGCAAATGTGTTGGTAT
AGCTTTTCAATCTCTTAGGCATGAAGATGCAGAGAATATAGGTTATGTGATACCAACTCC
GGTTATTACACATTTCATTGAGGACTACAAAAAATCTGGAGAATACACAGGCTTTCCTAT
ACTTGGAGTTGAATGGCAGAAAATGGAGAATCCTGATCTCCGCAAAGCAATGGGAATGAA
ACCAGATCAAAAGGGTGTTCGTGTTAGGAGGGTGGAGCCCACGGCTCCCGAATCTGGATG
CCTACAACCATCTGATATTATTCTTAGCTTTGATGGTGTTGACATTGCTAATGATGGAAC
AGTCCCTTTCAGGCATGGCGAGCGCATTGGCTTCAGTTATCTGGTTTCTCAGAAATATAC
TGGCGAGAAAGCCCTTGTTAAGGTTCTGCGTGATTCAAAAGTTCATGAATTTAAAATAAG
GCTAGCAACTCACAAGCGACTCGTTGCGGCTCATGTGAAGGGCAGGCCACCTTCATATTA
CATAGTTGCTGGCTTTGTTTTTGCAGCTGTCTCTGTTCCATATCTTCGATCCGAGTACGG
AAAAGATTATGAATATGATGCACCTGTCAAGTTGTTGGTGAAGCATTTGCATGCAATGGC
AGAATCACCTGATGAACAGCTTGTGGTGGTATCACAGGTGCTTGTATCAGATATCAATAT
AGGTTATGAAGAAATAGTCAATACCCAGGTTCTTGCTTTCAATGGTCAGCCTGTAAAAAA
TTTAAAGAACTTAGCGACCATGGTGGAAAATTGCAAAGATGAATTTTTGAAGTTTGATCT
GGAGTATGACCAGATTGTCGTCCTCGAGACGAAAACTGCAAAGGCGGCTACCCAGGACAT
TCTGACGACGCACTGTATACCTTCTGCAATGTCGGATGACCTTAAGGCCTAGTGGGAGGA
GGGAGCATGATGCAGCCCTGGGCCATCAGGTGGGTCAACAGATTGTGCCATATTTTTGGT
TGAATTGATTAGTGCAGCATAGTACCCGGTCCGTGAGGAAGAGAACGCCCAATGTATTTT
GTATTGTGAACTAAATATCTTTTGAGGGGTTCTGTGTGTCAAAGGGCAGGCTGGTGTCTA
AGCTCCGCTATCATAGAAGGCTCGAGGGATTGTCAGAGTCAGATAACAATAAGCTGGAGT
TGTTACAGGCAGAGTCATTATGAAAACAACAATAGCTAGTAAGAAGCCGATTTTTTTTTC
TCTACATGATTTCATTATAACTACTACATTATTAAATTATTAACGGGAAAAGGAATCATT
ACTGGTCCGTGGTTATAGTGGACCTTC