Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05529
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:58562234:58565319:1 gene:SORBI_3004G237400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCGGCGGTGGCCCGCCGAGGAAGCGCAACTTCAAGATCGAGGCGTTCAAGAACCGT
GTGGAGCTCGACCCCAAGTACGCGGAGCGGACATGGAAGGTCCTCGAGCACGCCATCCAC
GAGATCTACAACCACAACGCCAGTGGCCTCTCCTTCGAGGAGCTTTACAGGAGTGCCTAC
AACATGGTGCTTCACAAGTATGGTGAGAAGCTGTATGATGGCCTTCAGAACACAATGACA
TGGCGCTTGAAGGAAATATCAAAATCCATAGAGGCTGCACAGGGTGGTTTATTTTTGGAG
GAGCTGAATGCAAAGTGGATGGATCACAACAAGGCGTTACAGATGATACGAGATATTCTT
ATGTACATGGACAGGACATATGTCCCTACATCTCATAGGACACCTGTTCATGAGCTTGGT
CTGAATTTGTGGAGGGATCACATAATTCACTCCCCAATGATCCATAGTCGGCTGGTTAAC
ACCCTTTTGGATCTTATAAAAGGGGAAAGAATGGGTGAAGTGATTAACAGAGGCCTGATG
AGGAGCATAACGAAGATGCTGATGGATCTGGGTCCTGCTGTGTATCAAGACGATTTTGAG
AAACCATTTCTCGATGTTTCAGCCAGCTTCTACAGTGTGGAGTCTCAAGAGTTCATTGAG
TGCTGTGACTGTGGGAACTACCTTAAGAAGGCCGAGAGGCGTCTAAATGAGGAAATGGAG
CGTGTCTCACACTACTTGGATGCTGGCAGTGAGGCAAAGATAACTAGTGTAGTGGAGAAA
GAAATGATTGCCAATCACATGCACAGATTGGTTCACATGGAAAATTCGGGGCTTGTTAAC
ATGCTAGTAGATGACAGGTATGAAGATTTGGGTCGGATGTATTCCTTGTTCCGAAGGGTT
CCTGATGGGTTATCAACAATTAGAGATGTCATGACTTATTACCTGAGGGAAACAGGGAAG
CAGTTAGTGACGGATCCAGAAAGTTTGAAAGATCCAGTCGAATTTGTCCAACGTTTGTTA
AATGAGAAGGACAAGCATGATAAGATCATTAGTGTTGCTTTTGGCAATGACAAAACCTTC
CAGAATGCTCTGAATTCGTCTTTTGAGTATTTCATCAACTTAAACAACCGATCACCTGAA
TTCATATCATTATATGTTGATGACAAACTCCGCAAAGGACTTAAAGGGGCCACAGAAGAA
GATGTGGAGGTTATACTGGACAAAGTCATGATGCTGTTCCGATACCTCCAGGAGAAGGAT
GTGTTTGAAAAGTACTATAAGCAGCATTTGGCTAAAAGGCTCCTGTCTGGCAAAACTGTT
TCTGATGATGCTGAGAGAAGTATGATAGTTAAACTGAAGACAGAATGTGGATACCAGTTC
ACTTCCAAGCTAGAAGGCATGTTCACTGATATGAAAACCTCCCAGGACACCATGCAAGAC
TTCTATGCCAAGAAGTCTGAGGAACTCGGGGATGGCCCTACACTTGATGTCCACATTTTG
ACAACTGGTTCTTGGCCAACGCAGCCCAGCCCTCCTTGCAACCTTCCAACTGAAATTCTT
ACAGTATGTGAGAAATTCCGGGCATATTATCTTGGGACTCACAATGGCCGGAGATTGACA
TGGCAAACAAACATGGGTACAGCTGACATAAAAGCCACATTTGGAAAAGGCCAGAAGCAT
GAACTGAATGTATCCACTTATCAGATGTGTGTTCTCATGCTGTTTAACAATGCTGATGGA
TTGACCTACAAAGACATTGAACGGGATACTGAGATACCTGCCTCAGACCTAAAGAGATGT
CTGCAGTCCCTTGCTTGTGTCAAGGGGAAGAATGTTCTCCGTAAGGAGCCCATGAGCAAG
GACATTTCGGAGGATGATACATTCTACTTTAATGATAAGTTCACAAGCAAGCTTGTTAAA
GTGAAGATTGGGACAGTGGTAGCGCAAAAGGAATCTGAACCAGAGAAACAAGAGACTCGA
CAACGGGTTGAGGAGGACAGGAAACCTCAGATCGAGGCAGCCATTGTCAGGATCATGAAA
TCACGGAGGGTGTTGGATCATAACAGCATTGTAGCTGAGGTTACCAAGCAATTACAAGCA
CGTTTCTTGCCAAATCCTGTTGTCATAAAGAAGCGCATCGAATCTCTAATTGAGCGTGAA
TTCTTGGAAAGAGACAAAGTAGATAGAAAATTATATCGTTATCTTGCATAG

Peptide Sequence

PEP ID

EES05529
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:58562234:58565319:1 gene:SORBI_3004G237400 transcript:EES05529 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSGGGPPRKRNFKIEAFKNRVELDPKYAERTWKVLEHAIHEIYNHNASGLSFEELYRSAY
NMVLHKYGEKLYDGLQNTMTWRLKEISKSIEAAQGGLFLEELNAKWMDHNKALQMIRDIL
MYMDRTYVPTSHRTPVHELGLNLWRDHIIHSPMIHSRLVNTLLDLIKGERMGEVINRGLM
RSITKMLMDLGPAVYQDDFEKPFLDVSASFYSVESQEFIECCDCGNYLKKAERRLNEEME
RVSHYLDAGSEAKITSVVEKEMIANHMHRLVHMENSGLVNMLVDDRYEDLGRMYSLFRRV
PDGLSTIRDVMTYYLRETGKQLVTDPESLKDPVEFVQRLLNEKDKHDKIISVAFGNDKTF
QNALNSSFEYFINLNNRSPEFISLYVDDKLRKGLKGATEEDVEVILDKVMMLFRYLQEKD
VFEKYYKQHLAKRLLSGKTVSDDAERSMIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQD
FYAKKSEELGDGPTLDVHILTTGSWPTQPSPPCNLPTEILTVCEKFRAYYLGTHNGRRLT
WQTNMGTADIKATFGKGQKHELNVSTYQMCVLMLFNNADGLTYKDIERDTEIPASDLKRC
LQSLACVKGKNVLRKEPMSKDISEDDTFYFNDKFTSKLVKVKIGTVVAQKESEPEKQETR
QRVEEDRKPQIEAAIVRIMKSRRVLDHNSIVAEVTKQLQARFLPNPVVIKKRIESLIERE
FLERDKVDRKLYRYLA

Transcript Sequence

Transcript ID

EES05529
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:58562234:58565319:1 gene:SORBI_3004G237400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAGGAGGGGAAAAGAAGAGAGAGAGGAGGGAGGAGCCGTCTGGTTTTCCCCATCGGGTT
TCTTCCCCGCCGCCGCTCTCCCTGTGTCCAGTGTCCTGTGCCCACCCCGCTTCGGCCCGC
GTCCACCCACCCGCCTCGCCCCCCGAACCCTAACCTCTGGCGGCGATGAGCGGCGGTGGC
CCGCCGAGGAAGCGCAACTTCAAGATCGAGGCGTTCAAGAACCGTGTGGAGCTCGACCCC
AAGTACGCGGAGCGGACATGGAAGGTCCTCGAGCACGCCATCCACGAGATCTACAACCAC
AACGCCAGTGGCCTCTCCTTCGAGGAGCTTTACAGGAGTGCCTACAACATGGTGCTTCAC
AAGTATGGTGAGAAGCTGTATGATGGCCTTCAGAACACAATGACATGGCGCTTGAAGGAA
ATATCAAAATCCATAGAGGCTGCACAGGGTGGTTTATTTTTGGAGGAGCTGAATGCAAAG
TGGATGGATCACAACAAGGCGTTACAGATGATACGAGATATTCTTATGTACATGGACAGG
ACATATGTCCCTACATCTCATAGGACACCTGTTCATGAGCTTGGTCTGAATTTGTGGAGG
GATCACATAATTCACTCCCCAATGATCCATAGTCGGCTGGTTAACACCCTTTTGGATCTT
ATAAAAGGGGAAAGAATGGGTGAAGTGATTAACAGAGGCCTGATGAGGAGCATAACGAAG
ATGCTGATGGATCTGGGTCCTGCTGTGTATCAAGACGATTTTGAGAAACCATTTCTCGAT
GTTTCAGCCAGCTTCTACAGTGTGGAGTCTCAAGAGTTCATTGAGTGCTGTGACTGTGGG
AACTACCTTAAGAAGGCCGAGAGGCGTCTAAATGAGGAAATGGAGCGTGTCTCACACTAC
TTGGATGCTGGCAGTGAGGCAAAGATAACTAGTGTAGTGGAGAAAGAAATGATTGCCAAT
CACATGCACAGATTGGTTCACATGGAAAATTCGGGGCTTGTTAACATGCTAGTAGATGAC
AGGTATGAAGATTTGGGTCGGATGTATTCCTTGTTCCGAAGGGTTCCTGATGGGTTATCA
ACAATTAGAGATGTCATGACTTATTACCTGAGGGAAACAGGGAAGCAGTTAGTGACGGAT
CCAGAAAGTTTGAAAGATCCAGTCGAATTTGTCCAACGTTTGTTAAATGAGAAGGACAAG
CATGATAAGATCATTAGTGTTGCTTTTGGCAATGACAAAACCTTCCAGAATGCTCTGAAT
TCGTCTTTTGAGTATTTCATCAACTTAAACAACCGATCACCTGAATTCATATCATTATAT
GTTGATGACAAACTCCGCAAAGGACTTAAAGGGGCCACAGAAGAAGATGTGGAGGTTATA
CTGGACAAAGTCATGATGCTGTTCCGATACCTCCAGGAGAAGGATGTGTTTGAAAAGTAC
TATAAGCAGCATTTGGCTAAAAGGCTCCTGTCTGGCAAAACTGTTTCTGATGATGCTGAG
AGAAGTATGATAGTTAAACTGAAGACAGAATGTGGATACCAGTTCACTTCCAAGCTAGAA
GGCATGTTCACTGATATGAAAACCTCCCAGGACACCATGCAAGACTTCTATGCCAAGAAG
TCTGAGGAACTCGGGGATGGCCCTACACTTGATGTCCACATTTTGACAACTGGTTCTTGG
CCAACGCAGCCCAGCCCTCCTTGCAACCTTCCAACTGAAATTCTTACAGTATGTGAGAAA
TTCCGGGCATATTATCTTGGGACTCACAATGGCCGGAGATTGACATGGCAAACAAACATG
GGTACAGCTGACATAAAAGCCACATTTGGAAAAGGCCAGAAGCATGAACTGAATGTATCC
ACTTATCAGATGTGTGTTCTCATGCTGTTTAACAATGCTGATGGATTGACCTACAAAGAC
ATTGAACGGGATACTGAGATACCTGCCTCAGACCTAAAGAGATGTCTGCAGTCCCTTGCT
TGTGTCAAGGGGAAGAATGTTCTCCGTAAGGAGCCCATGAGCAAGGACATTTCGGAGGAT
GATACATTCTACTTTAATGATAAGTTCACAAGCAAGCTTGTTAAAGTGAAGATTGGGACA
GTGGTAGCGCAAAAGGAATCTGAACCAGAGAAACAAGAGACTCGACAACGGGTTGAGGAG
GACAGGAAACCTCAGATCGAGGCAGCCATTGTCAGGATCATGAAATCACGGAGGGTGTTG
GATCATAACAGCATTGTAGCTGAGGTTACCAAGCAATTACAAGCACGTTTCTTGCCAAAT
CCTGTTGTCATAAAGAAGCGCATCGAATCTCTAATTGAGCGTGAATTCTTGGAAAGAGAC
AAAGTAGATAGAAAATTATATCGTTATCTTGCATAGAAAGCTGTCATGTGATAATTCATG
AGCGGTTGGCATCCTTCTGCTCTTGTAAAACAGTTTTCTTTATGCTCAACTTCTGTTTTA
TCAGTTGGATTGGCTGCTGGGTTCATAGATGTTCAAACATTGGTTATTGGTTGATGGTGA
ATTGAAGTGGGGATTGTATTGAATTTTACTACAACACTTTCCCCTTTCGTTTGATGGTGC
TATGACAGGTCTGTATAAGAACTAAAGAAGCCGTAC