Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05458
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:57172865:57175577:1 gene:SORBI_3004G221400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATCACGTTCGCGGACCTGACGGAGCCGGCCACGGCCGGCGCCGAGCGGTGCGTGGAC
CGGCAGCTTTGGCTGGCGTGCGCGGGCGGCATGTGCACCGTGCCACCCGTGGGCGCCAGC
GTCTACTACTTCCCGCAGGGCCACGCGGAGCACGCGCTGGGCCTCGCCGGTACGGCCGAC
CTCTCCGCGGCGCGCGTCCCGGCGCTGGTCCCCTGCCGCGTCGCCGCAGTGCGCTACATG
GCTGACCCGGACACCGACGAGGTCTTCGCCAGGATCCGCCTCGTCCCGCTACGCGGCGGG
GAGGCGGACGCGGGTGGCCTCGAGGACGATGCGGCGGACGAGCAGGAGAAGCCGGCCTCG
TTCGCCAAGACGCTGACACAGTCCGACGCCAACAACGGCGGCGGGTTCTCCGTGCCGAGG
TACTGCGCCGAGACCATCTTCCCGCGGCTCGACTACGCCGCCGACCCGCCCGTGCAGACC
GTCGTCGCCAAGGACGTGCACGGGGCCGCCTGGAAGTTCCGCCACATCTACCGGGGCACG
CCGCGCCGGCACCTGCTCACCACGGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTC
GCCGGGGACTCCATCGTGTTCCTCCGCGGCGACAGCGGGGACCTGCACGTCGGCATCCGT
CGCGCGAAGCGTGGGTTCTGCGGCGCCGGTGGAGGCGGAGGCGAGGAGGCGCCTTCGCCC
GGGTGGGATCATTACGCGGGCCTCATGCGAGGTAATGTGAGCCCGTGCGCGGCCGCCAAG
GCACGGGGCAAGGTGCGACCAGAGGACGTGGCCGAGGCGGCGAGGCTGGCGGCTGCCGGG
CAGTCGTTTGAGGCGGTGTACTACCCTCGCGCGAGCACGCCCGAGTTCTGCGTTCGCGCC
GCCGCGGTCCGCGCGGCGATGAGGGTGCAGTGGTCCCCAGGGATGCGGTTCAAGATGGCG
TTCGAGACCGAGGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCGGCGTCCAG
GTCACCGACCCCATCCGCTGGCCGCAGTCGCCGTGGCGCCTTCTTCAGGTGACCTGGGAC
GAGCCGGACCTCCTGCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTGGAGCTGGTGTCC
AGCATGCCGGCCATCCACCTCGCCTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATCCCG
GCGTACCCGGAGTTCCCCTTCGAAGGGCAGCTCCTGAACCCGGCGTTCCCGCCCAACCCA
CTGCCACACGGCCAGCACCCCCACCCCCACCACCATTTCCTTCACGCCCACCCACCGTTC
TTCCCGTTCCCGGACGGCAGTGCTCCTGCAGCCATACAGGGAGCCAGGCATGCGCAATTC
GTTCCATCTTTATCAGATCTCCACCTTACCCACCTGCAGTCGAGCCTGCTGTACCCGGGG
CTCCGCCGTCCCGACCATGTCGGTCCGACGATCCCTATCCCGGCAAGAATCAGCACCGAC
CTGACCATCGGAGGCGCACCGGCGCGCGACGACGACGTCCCGTGCGCTCTGTCCATCGGC
GCCACCAACAAGCAGAAGCCCGACGCCGTCAAGCCGGCGGGGCTAGTGCTCTTCGGACGG
ACCATACTAACCGAGCAGCAGATGAGCCTCAGCAGCTCCGGCGGCGCGACCTCCCCAGCC
GCGACTACCGGCAACAGCTCTCAGCTGTACTGGAACGCCGAGAAGGGGCCCAATGTCTCG
GAGGGCTCGGGCTCCGGCGTCATCCAGAACAGCCCGACCAAGAACCACGCGTCGTCGGAG
CGGCTGCCGTGGTGCGTCGGGGACGGCGGCAGCCAGCAGCAGGTCTCCGAGCTCGGGCTT
GAGCCCGGGCAATGCAAGGTGTTCGTCGAGTCCGACACGGTCGGCCGCAACCTCGACCTC
TCGGCGCTGAGCTCGTTCGACGAGCTCTACCGCCGCCTGTCCGAGATGTTCGGCATCGAG
GGCGCGGAGCTGCGGAGCCGCGTGCTGTACCGCTGCGCCACCGGTGAAGTGAAGCACGCC
GGCGACGAGCCCTTCAGCGATTTCGTCAGGTCGGCACGGAGGCTCACAATACTAACCGAT
GCTGGGAGCGACAACCTCGGAAGCTAA

Peptide Sequence

PEP ID

EES05458
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:57172865:57175577:1 gene:SORBI_3004G221400 transcript:EES05458 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MITFADLTEPATAGAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGTAD
LSAARVPALVPCRVAAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKPAS
FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGT
PRRHLLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSP
GWDHYAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCVRA
AAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWD
EPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEFPFEGQLLNPAFPPNP
LPHGQHPHPHHHFLHAHPPFFPFPDGSAPAAIQGARHAQFVPSLSDLHLTHLQSSLLYPG
LRRPDHVGPTIPIPARISTDLTIGGAPARDDDVPCALSIGATNKQKPDAVKPAGLVLFGR
TILTEQQMSLSSSGGATSPAATTGNSSQLYWNAEKGPNVSEGSGSGVIQNSPTKNHASSE
RLPWCVGDGGSQQQVSELGLEPGQCKVFVESDTVGRNLDLSALSSFDELYRRLSEMFGIE
GAELRSRVLYRCATGEVKHAGDEPFSDFVRSARRLTILTDAGSDNLGS

Transcript Sequence

Transcript ID

EES05458
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:57172865:57175577:1 gene:SORBI_3004G221400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGAACAGGCACCTCCGTAGCTCACTTACACACGACACCCGCTCGTCTTCGTCTCCTCCAC
TCCTCCGTACCCCTCTCACTCCACCGGCCATCTCCTCGGTGCGTTCCCGATGATCACGTT
CGCGGACCTGACGGAGCCGGCCACGGCCGGCGCCGAGCGGTGCGTGGACCGGCAGCTTTG
GCTGGCGTGCGCGGGCGGCATGTGCACCGTGCCACCCGTGGGCGCCAGCGTCTACTACTT
CCCGCAGGGCCACGCGGAGCACGCGCTGGGCCTCGCCGGTACGGCCGACCTCTCCGCGGC
GCGCGTCCCGGCGCTGGTCCCCTGCCGCGTCGCCGCAGTGCGCTACATGGCTGACCCGGA
CACCGACGAGGTCTTCGCCAGGATCCGCCTCGTCCCGCTACGCGGCGGGGAGGCGGACGC
GGGTGGCCTCGAGGACGATGCGGCGGACGAGCAGGAGAAGCCGGCCTCGTTCGCCAAGAC
GCTGACACAGTCCGACGCCAACAACGGCGGCGGGTTCTCCGTGCCGAGGTACTGCGCCGA
GACCATCTTCCCGCGGCTCGACTACGCCGCCGACCCGCCCGTGCAGACCGTCGTCGCCAA
GGACGTGCACGGGGCCGCCTGGAAGTTCCGCCACATCTACCGGGGCACGCCGCGCCGGCA
CCTGCTCACCACGGGGTGGAGCACGTTCGTGAACCAGAAGAAGCTCGTCGCCGGGGACTC
CATCGTGTTCCTCCGCGGCGACAGCGGGGACCTGCACGTCGGCATCCGTCGCGCGAAGCG
TGGGTTCTGCGGCGCCGGTGGAGGCGGAGGCGAGGAGGCGCCTTCGCCCGGGTGGGATCA
TTACGCGGGCCTCATGCGAGGTAATGTGAGCCCGTGCGCGGCCGCCAAGGCACGGGGCAA
GGTGCGACCAGAGGACGTGGCCGAGGCGGCGAGGCTGGCGGCTGCCGGGCAGTCGTTTGA
GGCGGTGTACTACCCTCGCGCGAGCACGCCCGAGTTCTGCGTTCGCGCCGCCGCGGTCCG
CGCGGCGATGAGGGTGCAGTGGTCCCCAGGGATGCGGTTCAAGATGGCGTTCGAGACCGA
GGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCGGCGTCCAGGTCACCGACCC
CATCCGCTGGCCGCAGTCGCCGTGGCGCCTTCTTCAGGTGACCTGGGACGAGCCGGACCT
CCTGCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTGGAGCTGGTGTCCAGCATGCCGGC
CATCCACCTCGCCTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATCCCGGCGTACCCGGA
GTTCCCCTTCGAAGGGCAGCTCCTGAACCCGGCGTTCCCGCCCAACCCACTGCCACACGG
CCAGCACCCCCACCCCCACCACCATTTCCTTCACGCCCACCCACCGTTCTTCCCGTTCCC
GGACGGCAGTGCTCCTGCAGCCATACAGGGAGCCAGGCATGCGCAATTCGTTCCATCTTT
ATCAGATCTCCACCTTACCCACCTGCAGTCGAGCCTGCTGTACCCGGGGCTCCGCCGTCC
CGACCATGTCGGTCCGACGATCCCTATCCCGGCAAGAATCAGCACCGACCTGACCATCGG
AGGCGCACCGGCGCGCGACGACGACGTCCCGTGCGCTCTGTCCATCGGCGCCACCAACAA
GCAGAAGCCCGACGCCGTCAAGCCGGCGGGGCTAGTGCTCTTCGGACGGACCATACTAAC
CGAGCAGCAGATGAGCCTCAGCAGCTCCGGCGGCGCGACCTCCCCAGCCGCGACTACCGG
CAACAGCTCTCAGCTGTACTGGAACGCCGAGAAGGGGCCCAATGTCTCGGAGGGCTCGGG
CTCCGGCGTCATCCAGAACAGCCCGACCAAGAACCACGCGTCGTCGGAGCGGCTGCCGTG
GTGCGTCGGGGACGGCGGCAGCCAGCAGCAGGTCTCCGAGCTCGGGCTTGAGCCCGGGCA
ATGCAAGGTGTTCGTCGAGTCCGACACGGTCGGCCGCAACCTCGACCTCTCGGCGCTGAG
CTCGTTCGACGAGCTCTACCGCCGCCTGTCCGAGATGTTCGGCATCGAGGGCGCGGAGCT
GCGGAGCCGCGTGCTGTACCGCTGCGCCACCGGTGAAGTGAAGCACGCCGGCGACGAGCC
CTTCAGCGATTTCGTCAGGTCGGCACGGAGGCTCACAATACTAACCGATGCTGGGAGCGA
CAACCTCGGAAGCTAAACGAGGAGCAGCTGCAGCAGTGAGATATTCCAGCCGCGAGTATT
ATGATGTTCTTTGGTACTATTACTGTTAGCATGTACTACTACTGTACAGGTGAGGCCGTG
AGGCGTGAGCTATGATGGTTTTGTTCAAAGTCCGTTCCAACTCTGAACTCTGAAGAGAGA
TTTCGCCATGGACATGGCAGCTCGTAGGCAATGCTGCAATGATTAGGCAGCAGCTCGTTC
TTGCTCCTTCTCTGTATCCAACAAATCACTGTAAAACGTGGGGGTAACCCTAGTACTAGT
ACTCATCTTGTTCCTTCTCTGGAGT