Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05393
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:55840759:55845719:1 gene:SORBI_3004G208500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCATCGCCACCGCCGGCCCTCGAGATCCTAGTTCGCGAGCCCGACGGCTGCACGGTG
TGGTCTGGCCCGCCATACCCGCCGGGCACCACCACTCCGCCGCAGAGACTCCCAAAGACG
GCGTGCAGCGCCACCTCTTTCTCCACCGACGGTGCCCGCCTCCTGGCGACTGTGGCATCG
GCCTCGGCCACCGTCTACGACTGCCGCACACTCGCCGTTGTCAAGTGCTTCGAGCTCCCG
GGTCTCCTCGCCGCCGCGCTGTCGCCCACGGGGGCGTATCTGCAGACCTTCCAGAAGTCA
TCCTCGCCGCAGGAGAAGAATGTCACGGTCTGGCACGTCGACTCAGCTGCTGCTCTCTAC
CAGCACTACCAGAAGAGCATGTCTAAGGCCACCTGGCCAATGGTTCAGTTTTCTGCGGAT
GAATCGGTCGCTTGCCGGATGATGCCTAATGAGATACAATTCTTTGATCCAAAAGATTTT
GCAAAAGGAATTTTGTATAGGATAAGAATGCCTGGCATAGCTACGATGCAGCTAGCAACT
GCACCAGGATCTCATGTTGCTGGATTCGTCCCAGAGGCTAAGGGTGTTCCAGCTAGCGTT
CAGATATTTTCTTGCAACAAGGACACACAAAATCAAGTTGTTGCTCGCAGGAGCTTTTTT
CGTTGTTCCACTGTTCAATTACACTGGAACAAAGGGTCCACTGGGCTTCTAGTTCTTGTT
CAAGCTGACGTGGATAAAACCAACCAGAGTTACTATGGTGAAACCAAGTTGAACTACTTG
ACAACTGACAGGGCCTTTGAAGGAATTGTTCCACTTAAAAAGGATGGGCCAGTCCATGAT
GTGCAGTGGTCTTCCTCTGGCTCTGAATTTGCTGTGGTTTATGGATTTATGCCGGCCAAG
GCAACAATATTCAACAAGAAATGCAACCCTCTTGTTGAGCTTGGTGAAGGACCTTACAAT
ACAATAAGATGGAATCCCAAAGGACGATTTGTTGTATTAGCAGGATTTGGTAATTTGCCT
GGTGATATGGCATTCTGGGATTATTCAGAAAAGAAATTGGTAGCGAAAACAAAGGCAGAA
TGTTCTGTCACAAGTGAATGGTCCCCTGATGGTCGTCATTTTATGACTGCTACAACAGCT
CCGAGGCTCCAAATAGACAATTGTATAAAAATATTTGACCACAACGGATCTCTGCAGTTT
AAGAAGATGTTTGAAAGGCTGTATCAGGCTGATTGGAAACCTGAAGTACCTGAAAGATTC
AGTGACATTGCTGACCTGACAACATCCTTGAGTACCTTAAAGATTGAAGAAACAAAAAAA
CAAGTTTCAGCACAAGGTTCCAAGTCAGCACAAACAGCAAGCAAGGCCCCTGCAAATACA
GCGCCAAAACCTACAGCATACCGCCCACCTCATGCTAAGGGTTCTGCAGAACTTCAGGAC
AAGCTCTTTGGTGGACTAGCTCCTGCAGGGGGGGAGATGAGCAAAAATGCATTGCGAAAC
AAGAAGCGCAGAGAGAAACAGAAGGAAAAGAAAGCTGCAGAAGCGTCAGGCTCCCCTGCT
GATGAAAGTTGA

Peptide Sequence

PEP ID

EES05393
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:55840759:55845719:1 gene:SORBI_3004G208500 transcript:EES05393 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASPPPALEILVREPDGCTVWSGPPYPPGTTTPPQRLPKTACSATSFSTDGARLLATVAS
ASATVYDCRTLAVVKCFELPGLLAAALSPTGAYLQTFQKSSSPQEKNVTVWHVDSAAALY
QHYQKSMSKATWPMVQFSADESVACRMMPNEIQFFDPKDFAKGILYRIRMPGIATMQLAT
APGSHVAGFVPEAKGVPASVQIFSCNKDTQNQVVARRSFFRCSTVQLHWNKGSTGLLVLV
QADVDKTNQSYYGETKLNYLTTDRAFEGIVPLKKDGPVHDVQWSSSGSEFAVVYGFMPAK
ATIFNKKCNPLVELGEGPYNTIRWNPKGRFVVLAGFGNLPGDMAFWDYSEKKLVAKTKAE
CSVTSEWSPDGRHFMTATTAPRLQIDNCIKIFDHNGSLQFKKMFERLYQADWKPEVPERF
SDIADLTTSLSTLKIEETKKQVSAQGSKSAQTASKAPANTAPKPTAYRPPHAKGSAELQD
KLFGGLAPAGGEMSKNALRNKKRREKQKEKKAAEASGSPADES

Transcript Sequence

Transcript ID

EES05393
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:55840759:55845719:1 gene:SORBI_3004G208500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGAGCGAAGGATAACTGGTCGAACACAGAGGGGCAATATCTATTTTAGGGATTCCAGTAG
TGTCTATTTTTCAATTTTAAGGACCAATTTCTCTCTAGGTAACTTTTTCTTACCATTTTA
GAGAAAATACTTCTCTTCTTTGACGATAATTTTCTCTTACCTTTTAGATACATTAATTTT
CTTCTTTTAGGATTAGGATTTCTTTTCTTTTCTCTTGCTTTTTTTTGGCAAAACTTTTCT
CTTCCTAGACTGCCACTGAGCACTGGCCCACTAGAATGAAAACTTGCAATCCCTTTCAAA
AAAAAAAAGATACAACTTGCAATCGCAAGCAGTTTTTGGGTGGGCTGACCCCTGACCGGC
CAGCCAAAATGGGCCTAGGCCGTACGGAACCCAAACTATTGAAGTAGCCCAAGCCCCAGA
ACAACTCTCACAACGGCGGCCTCACGAAAGCTTTAGCGCCCTAGTCCCACCTGTCAGCTG
CGGTAGCAAGCAAACTGACAACACCCGCATCTCCTGGACGCCGTCCCCAACCTCTCCGTC
ACGCGCCGCCGCCGCCCGTCACTGTGCTCGCGATCCCGCCGGCGGCTCCAGAGGACTTGT
CGCGTGCTCGGCCATGGCATCGCCACCGCCGGCCCTCGAGATCCTAGTTCGCGAGCCCGA
CGGCTGCACGGTGTGGTCTGGCCCGCCATACCCGCCGGGCACCACCACTCCGCCGCAGAG
ACTCCCAAAGACGGCGTGCAGCGCCACCTCTTTCTCCACCGACGGTGCCCGCCTCCTGGC
GACTGTGGCATCGGCCTCGGCCACCGTCTACGACTGCCGCACACTCGCCGTTGTCAAGTG
CTTCGAGCTCCCGGGTCTCCTCGCCGCCGCGCTGTCGCCCACGGGGGCGTATCTGCAGAC
CTTCCAGAAGTCATCCTCGCCGCAGGAGAAGAATGTCACGGTCTGGCACGTCGACTCAGC
TGCTGCTCTCTACCAGCACTACCAGAAGAGCATGTCTAAGGCCACCTGGCCAATGGTTCA
GTTTTCTGCGGATGAATCGGTCGCTTGCCGGATGATGCCTAATGAGATACAATTCTTTGA
TCCAAAAGATTTTGCAAAAGGAATTTTGTATAGGATAAGAATGCCTGGCATAGCTACGAT
GCAGCTAGCAACTGCACCAGGATCTCATGTTGCTGGATTCGTCCCAGAGGCTAAGGGTGT
TCCAGCTAGCGTTCAGATATTTTCTTGCAACAAGGACACACAAAATCAAGTTGTTGCTCG
CAGGAGCTTTTTTCGTTGTTCCACTGTTCAATTACACTGGAACAAAGGGTCCACTGGGCT
TCTAGTTCTTGTTCAAGCTGACGTGGATAAAACCAACCAGAGTTACTATGGTGAAACCAA
GTTGAACTACTTGACAACTGACAGGGCCTTTGAAGGAATTGTTCCACTTAAAAAGGATGG
GCCAGTCCATGATGTGCAGTGGTCTTCCTCTGGCTCTGAATTTGCTGTGGTTTATGGATT
TATGCCGGCCAAGGCAACAATATTCAACAAGAAATGCAACCCTCTTGTTGAGCTTGGTGA
AGGACCTTACAATACAATAAGATGGAATCCCAAAGGACGATTTGTTGTATTAGCAGGATT
TGGTAATTTGCCTGGTGATATGGCATTCTGGGATTATTCAGAAAAGAAATTGGTAGCGAA
AACAAAGGCAGAATGTTCTGTCACAAGTGAATGGTCCCCTGATGGTCGTCATTTTATGAC
TGCTACAACAGCTCCGAGGCTCCAAATAGACAATTGTATAAAAATATTTGACCACAACGG
ATCTCTGCAGTTTAAGAAGATGTTTGAAAGGCTGTATCAGGCTGATTGGAAACCTGAAGT
ACCTGAAAGATTCAGTGACATTGCTGACCTGACAACATCCTTGAGTACCTTAAAGATTGA
AGAAACAAAAAAACAAGTTTCAGCACAAGGTTCCAAGTCAGCACAAACAGCAAGCAAGGC
CCCTGCAAATACAGCGCCAAAACCTACAGCATACCGCCCACCTCATGCTAAGGGTTCTGC
AGAACTTCAGGACAAGCTCTTTGGTGGACTAGCTCCTGCAGGGGGGGAGATGAGCAAAAA
TGCATTGCGAAACAAGAAGCGCAGAGAGAAACAGAAGGAAAAGAAAGCTGCAGAAGCGTC
AGGCTCCCCTGCTGATGAAAGTTGATCTGTACTGGATTTGTTTCAGCATTTCCATCCACC
GAGTATAACAGACAGTGACAAATTATTTCTTTCAATCTGGTGAAACGGCCATGCACCGAT
TCACGTTTACACTGTATGAAACTCTTCATAGTTTGGTGCAGACAGTCGTTCTTTTTTTCA
GTGTTATACTGAGTTTGTATAACAATATCGAAGAAACAGAAAAGTGAGGCTATTTCATAT
TT