Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05342
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:54869063:54874521:1 gene:SORBI_3004G197600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGAGAAGGAGCAGCCGCGCCTGCTCCCTTCTTGGTTCCGCCCAGCTGCTCCTGCTG
CTGCTCTCGCTCGCGCTCGGCTCCGCCGCCGCCCAGAAGGGCTCCACATGGAAGACCCTC
AGCGGCAAGGCTCCAGTAATCGTTGCTAAGGGCGGGTTCTCTGGTCTATTTCCTGAGTCC
AGTCTATATGCTTATCAGATTCTTGGGAGTCTTAGCTCCCCTGACACAGTCATGTGGTGT
GATGTTCGGTTGACAAAGGATGGCGGTGGTATCTGCCTACCAAGCATAGACATGGATAAC
TGCACAACGATAGCCAATTTTTTTCCACAAGGGAAGAAGACCTACAATGTTAATGGTGTA
TCTACGGTGGGATGGTTCTCCGTGGACTACACAAGCACTGATCTGCTAAATGTATCTCTG
AAGCAATCGGTCCTATCTCGTACCGGTGTATATGATGGTATCTTTCCAATAATTCCTGTT
GAAAATGTTTACACCCAGTTTAATCCCGTTGCTGTTTGGTTAAATGTCCAGCAAGACAGT
TTCTACAGCCAGTTTAAGCTTAGCATGAGAAGCTATATCCTGTCTTTATTGAAAAATTTT
GTTGTCGATTACATCTCATCGCCTGAAGTGAACTTCCTCACCAGTATATCTGGAAGAGTT
AGCAAGAAGACGAAGCTTGTGTTCCGCTTTCTTGACGAACGCTCTATTGAGCCATCGACA
AATCAGACTTATGGCTCAATGTTGAAAAATCTAACGTTTGTCAAGACTTTTGCCTCTGGA
ATACTTGTTCCCAAAAGCTATATCTGGCCTGTTACACCAGATAATTACCTGCTGCCTTAT
ACTTCAGTTGTTGATGATGCTCACAAAGCAGGGCTAGAAATCTATGCTGCTGATTTTGCA
AATGACTTTACTATCAGCTATAACTACAGCTATGATCCATTAGCAGAATATCTTTCCTTC
ATTGATAATGGTGCCTTCTCTGTCGATGGTGTATTGAGTGATTTTCCAATTACTCCTTCA
GAGGCAGTTGATTGCTTTAGTAACCTGAACAACAGCAAGATCGATCATGCTAAACCTCTA
GTTATCTCTCATAATGGTGCTAGCGGTGACTACCCAGACTGCACCGACCAAGCTTATGAA
AAGGCAGTTGCTGATGGTGCAGATGTCATTGACTGTCCTGTTCAAGTGACCAAAGATGGC
ATACTGATATGCATGAGTTCTGTTGACCTCATGAATGCTACTACTGTTGCAAAATCACAA
TTTGCTTCGCAAGTAACTACCATCAACGATCTAAAGGCTGGGCCTGGAGTCTTCACCTTC
AACCTCACTTGGGATGATATTTCTAAGAACCTAAAGCCCATGATATCGAACCCAGCGATC
GGCTTTAACCAGTACAGAAATCCCAGAAACAAGAATGCAGGAAATTTCATGAGATTATCA
GACTTTTTGACCTTTGCAAAGGGAAAGGATTTGTCAGGAATCATGATAACTGTTGAGCAT
GCTGCCTTCATGGCAGAGGAGCTTGGATTTGGTGTGGTAGATGCAGTGATCAAAGCCCTT
GATGACTCTGGTTATAGCAAGCAGACTGCCCAGAGTGTTATGATTCAGTCAACCAACAGC
TCAGTTCTAGTGAAGTTCAAGCAGGAAACCAAGTACAACCTTGTCTACATGATTGAAGAA
AATGTCAGAGATGCTGCACCTTCCTCCCTTGCAGATATTAAGAAGTTTGCTAGTGCTGTT
TCTGTTAGCACCACATCTGTTTTCCCGGAAGACCATTATTATTTGACAAACCAGACCAAT
AATCTTGTTAAGTCCCTTAAGTCTGCTGGCCTCCAAGTTTACGCTTACGTGCTCATGAAT
GAGTTTGGTACTCAACCAAATGACTTCTTCGCAGACGCCACTGTACAGATTAATGCTTAT
GTGCATGTGCGAGGTGCTAATGTGGATGGGGTCATCACTGATTTCCCTGGGACTGCTCAC
AGATACAAATTGAACTCCTGCACGAGCATGGGAAAGAACGCACCACCCTTTATGTCGCCT
CCAAAACCTGGTGACCTCCTTACAACCATGCCCCCATTTGCACAACCACCAGCAGCGGCG
CCAATGCCGCTCTTGACGGATGCTGACGTCGCAGAACCAGCCCTACCTCCAGTCAGTAAC
ACCACCACGCCTGCATCGCCTTCGGATGCTGCCCTCATGATGCGGACTGATGTCTCGATC
CTCATCACATTGCTGATGCTATGTGCTTCCCTCCTCATCTGA

Peptide Sequence

PEP ID

EES05342
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:54869063:54874521:1 gene:SORBI_3004G197600 transcript:EES05342 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGRRSSRACSLLGSAQLLLLLLSLALGSAAAQKGSTWKTLSGKAPVIVAKGGFSGLFPES
SLYAYQILGSLSSPDTVMWCDVRLTKDGGGICLPSIDMDNCTTIANFFPQGKKTYNVNGV
STVGWFSVDYTSTDLLNVSLKQSVLSRTGVYDGIFPIIPVENVYTQFNPVAVWLNVQQDS
FYSQFKLSMRSYILSLLKNFVVDYISSPEVNFLTSISGRVSKKTKLVFRFLDERSIEPST
NQTYGSMLKNLTFVKTFASGILVPKSYIWPVTPDNYLLPYTSVVDDAHKAGLEIYAADFA
NDFTISYNYSYDPLAEYLSFIDNGAFSVDGVLSDFPITPSEAVDCFSNLNNSKIDHAKPL
VISHNGASGDYPDCTDQAYEKAVADGADVIDCPVQVTKDGILICMSSVDLMNATTVAKSQ
FASQVTTINDLKAGPGVFTFNLTWDDISKNLKPMISNPAIGFNQYRNPRNKNAGNFMRLS
DFLTFAKGKDLSGIMITVEHAAFMAEELGFGVVDAVIKALDDSGYSKQTAQSVMIQSTNS
SVLVKFKQETKYNLVYMIEENVRDAAPSSLADIKKFASAVSVSTTSVFPEDHYYLTNQTN
NLVKSLKSAGLQVYAYVLMNEFGTQPNDFFADATVQINAYVHVRGANVDGVITDFPGTAH
RYKLNSCTSMGKNAPPFMSPPKPGDLLTTMPPFAQPPAAAPMPLLTDADVAEPALPPVSN
TTTPASPSDAALMMRTDVSILITLLMLCASLLI

Transcript Sequence

Transcript ID

EES05342
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:54869063:54874521:1 gene:SORBI_3004G197600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCGCAGTTTTCTAACCACCTTCCTTCCCCCTCCTCCCCTGACCCTGATGCCACCTTCTC
CTCCGGTATCTGTATCCCACCCAGACACAGCTCAGCAGCAGCATCGCATCGCCTCGCCCC
CGATTTCTTTTGTCTCTCTCTATCTCCAGTCTTAAAAATCCAACGCCAACGCGGCCGCCG
GACGCGCATTGCTCTCCCTCCCTGGCTCGTCTCCTAATCATCGCCACCTCTTCCTCTGCT
CCCCCTCCCAGGGGCCGTTCTTGGAGCTCCGGTTCCTTGAGCTGCGCCTGCGTCTGCTGC
TGACGCCGCCGCCGGTGGTCGCGTAGGTGGTGGCGGCCCGCAATGGGGAGAAGGAGCAGC
CGCGCCTGCTCCCTTCTTGGTTCCGCCCAGCTGCTCCTGCTGCTGCTCTCGCTCGCGCTC
GGCTCCGCCGCCGCCCAGAAGGGCTCCACATGGAAGACCCTCAGCGGCAAGGCTCCAGTA
ATCGTTGCTAAGGGCGGGTTCTCTGGTCTATTTCCTGAGTCCAGTCTATATGCTTATCAG
ATTCTTGGGAGTCTTAGCTCCCCTGACACAGTCATGTGGTGTGATGTTCGGTTGACAAAG
GATGGCGGTGGTATCTGCCTACCAAGCATAGACATGGATAACTGCACAACGATAGCCAAT
TTTTTTCCACAAGGGAAGAAGACCTACAATGTTAATGGTGTATCTACGGTGGGATGGTTC
TCCGTGGACTACACAAGCACTGATCTGCTAAATGTATCTCTGAAGCAATCGGTCCTATCT
CGTACCGGTGTATATGATGGTATCTTTCCAATAATTCCTGTTGAAAATGTTTACACCCAG
TTTAATCCCGTTGCTGTTTGGTTAAATGTCCAGCAAGACAGTTTCTACAGCCAGTTTAAG
CTTAGCATGAGAAGCTATATCCTGTCTTTATTGAAAAATTTTGTTGTCGATTACATCTCA
TCGCCTGAAGTGAACTTCCTCACCAGTATATCTGGAAGAGTTAGCAAGAAGACGAAGCTT
GTGTTCCGCTTTCTTGACGAACGCTCTATTGAGCCATCGACAAATCAGACTTATGGCTCA
ATGTTGAAAAATCTAACGTTTGTCAAGACTTTTGCCTCTGGAATACTTGTTCCCAAAAGC
TATATCTGGCCTGTTACACCAGATAATTACCTGCTGCCTTATACTTCAGTTGTTGATGAT
GCTCACAAAGCAGGGCTAGAAATCTATGCTGCTGATTTTGCAAATGACTTTACTATCAGC
TATAACTACAGCTATGATCCATTAGCAGAATATCTTTCCTTCATTGATAATGGTGCCTTC
TCTGTCGATGGTGTATTGAGTGATTTTCCAATTACTCCTTCAGAGGCAGTTGATTGCTTT
AGTAACCTGAACAACAGCAAGATCGATCATGCTAAACCTCTAGTTATCTCTCATAATGGT
GCTAGCGGTGACTACCCAGACTGCACCGACCAAGCTTATGAAAAGGCAGTTGCTGATGGT
GCAGATGTCATTGACTGTCCTGTTCAAGTGACCAAAGATGGCATACTGATATGCATGAGT
TCTGTTGACCTCATGAATGCTACTACTGTTGCAAAATCACAATTTGCTTCGCAAGTAACT
ACCATCAACGATCTAAAGGCTGGGCCTGGAGTCTTCACCTTCAACCTCACTTGGGATGAT
ATTTCTAAGAACCTAAAGCCCATGATATCGAACCCAGCGATCGGCTTTAACCAGTACAGA
AATCCCAGAAACAAGAATGCAGGAAATTTCATGAGATTATCAGACTTTTTGACCTTTGCA
AAGGGAAAGGATTTGTCAGGAATCATGATAACTGTTGAGCATGCTGCCTTCATGGCAGAG
GAGCTTGGATTTGGTGTGGTAGATGCAGTGATCAAAGCCCTTGATGACTCTGGTTATAGC
AAGCAGACTGCCCAGAGTGTTATGATTCAGTCAACCAACAGCTCAGTTCTAGTGAAGTTC
AAGCAGGAAACCAAGTACAACCTTGTCTACATGATTGAAGAAAATGTCAGAGATGCTGCA
CCTTCCTCCCTTGCAGATATTAAGAAGTTTGCTAGTGCTGTTTCTGTTAGCACCACATCT
GTTTTCCCGGAAGACCATTATTATTTGACAAACCAGACCAATAATCTTGTTAAGTCCCTT
AAGTCTGCTGGCCTCCAAGTTTACGCTTACGTGCTCATGAATGAGTTTGGTACTCAACCA
AATGACTTCTTCGCAGACGCCACTGTACAGATTAATGCTTATGTGCATGTGCGAGGTGCT
AATGTGGATGGGGTCATCACTGATTTCCCTGGGACTGCTCACAGATACAAATTGAACTCC
TGCACGAGCATGGGAAAGAACGCACCACCCTTTATGTCGCCTCCAAAACCTGGTGACCTC
CTTACAACCATGCCCCCATTTGCACAACCACCAGCAGCGGCGCCAATGCCGCTCTTGACG
GATGCTGACGTCGCAGAACCAGCCCTACCTCCAGTCAGTAACACCACCACGCCTGCATCG
CCTTCGGATGCTGCCCTCATGATGCGGACTGATGTCTCGATCCTCATCACATTGCTGATG
CTATGTGCTTCCCTCCTCATCTGAAGATAGTCCTGCACAACATCATACGCGGCGTGGCGC
ATTAGAGTTGAGGATTTCACATTGAGCTGCTAATAGCAATTCTTTCCACCACCTTTATGT
AGCGATTCTTTTTCTTGTTCTATCCGGTGTTTTGGAGGATGGATGGATGTTCAGCTTGAT
ACCCCAACGGTGACACCTGTGTGTGCTGCCGCTGCCTCTAGGTACATTTTGGTACATATG
TGTGGTGATACATTGTTCAGGTCATCTTTCCTACTGCCAACCTGCCGCTGGAGGGCAAGA
TATTGACTGCAACATTACTTGGGTTTGTTAGAATGCGCTCCAATCCATCTCAATCCACAT
GGATTCGAAGGGATTGTGGTGTAAACTTAGTTAATTTTCTACCATAATCTCTGCCAACCC
GTGTGAACTGGGGGTGAATTTGTGTGTATCCAAAATTCCAAACAAGCGCTTGGGAGCTTT
GAAAAGGAGTAAAATATATTTGAGGCCCAATAACTTG