Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05311
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:54299577:54302278:1 gene:SORBI_3004G191000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAGCCGGCGACAACACCAAGCCGCACGCGGTGTGCGTCCCGTTCCCGGCGCAGGGC
CACGTGACGCCGATGATGAAGCTGGCCAAGGTCCTCTACTGCAAGGGCTTCCACATCACC
TTCGTCAACACCGAGTACAACCACCGCCGCCTGATCCGGTCCCGGGGCCCCCAGGCCGTC
GCGGGCCTCCCGGGCTTCCGCTTCGCCACCATCCCTGACGGCCTGCCGCACTCGGACGCC
GACGCCACGCAGGACCCCGCCGCGATCTGCGACTCCACCATGAAGACCTGCCTCCCGCAC
CTCAAGCGCCTGCTCGACCGCCTCAACCACGACGCCGCCGGCGATGGCGAGCAGGTGCCG
CCGCCGCCGCCGCCGGTGACGTGCGTCGTGGCCGACAACGTCACCAGCTTCTGCCTGGAC
GCTGCCAAGGACATCGGCGTGCCTTGCCTGCTCTTCTGGACGGCCAGCGCCTGCGGCTAC
CTGGGCTACCGCCACTTCCAGTTCCTCATGGACGAAGGCCTTGCGCCTCTCAAAGACGAG
GCGCAGCTGACGAACGGGTACCTGGACACGCCGGTGGGGTGGGCGCGCGGGATGAGCAAG
CACATGCGGCTCAGGGACTTCCCGAGCTTCATCTACACGATGCAGCGCGGCGACATCCTG
CTGGACTTCATGATGCACGAGGTGTCGCGGACGAACGCCGCCGCCGCCGTCATCCTCAAC
ACCTTCGACGAGCTCGAGCCAGAGGCGCTGGACGCCATGCGCGCCATCCTGCCGCCGCCC
GTCTACACCATCGGCCCGCTCAGTCTCCTCCTCGAGCGGCTGGTGGCCACCGCCGCCGCC
GCCGTCCCTGAACCTGGCGACGACGTCGTCGTCGTCGACGCCGCCGCGCTCGGCACGGTC
CGCGCCAGCCTCTGGAAGGAAGACCACACCTGCCTGCGGTGGCTGGACGGCAGGGCGGCC
CGCCGGTCCGTGGTGTACGTGAACTACGGGTGCGTCACCACCATGTCGAACCAGGACCTG
GTGGAGTTCGCGTGGGGGCTGGCGAGCAGCGGCTACGACTTCCTGTGGATCATCCGGCCG
GACCTGGTGAAGGGCGAGACGGCGGTGCTGCCGCCGGAGTTCGTGGAGTCCACCAAGGGC
AGGTGCCTCCTGGCGAGCTGGTGCGAGCAGGAGGCGGTGCTGCGGCACGAGGCGGTGGGG
GTGTTCCTGACGCACAGCGGGTGGAACTCCATGACGGAGAGCCTCAGCGCGGGCGTGCCC
ATGCTGTGCTGGCCCTTCTTCGCGGAGCAGCAGACCAACCGTCGGTACGCGTGCACCGAG
TGGGGCGTGGGGATGGAGGTCGACGGCGACGTGCGGCGGGAGGCTCTGGCGGCAACGATA
CGGGAGGCAATGGCCGGCGACAAGGGGAAGGAGATGAAGCGGAGGGCGGACGAGTGGAAG
GAGGCCGCCATTCGGGCCACGCAGCCTGGCGGCACGGCGTTGACCAACCTGGACGACCTA
ATCAAGAATCACGTCCTGCTACCTAAGTGCTGA

Peptide Sequence

PEP ID

EES05311
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:54299577:54302278:1 gene:SORBI_3004G191000 transcript:EES05311 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAGDNTKPHAVCVPFPAQGHVTPMMKLAKVLYCKGFHITFVNTEYNHRRLIRSRGPQAV
AGLPGFRFATIPDGLPHSDADATQDPAAICDSTMKTCLPHLKRLLDRLNHDAAGDGEQVP
PPPPPVTCVVADNVTSFCLDAAKDIGVPCLLFWTASACGYLGYRHFQFLMDEGLAPLKDE
AQLTNGYLDTPVGWARGMSKHMRLRDFPSFIYTMQRGDILLDFMMHEVSRTNAAAAVILN
TFDELEPEALDAMRAILPPPVYTIGPLSLLLERLVATAAAAVPEPGDDVVVVDAAALGTV
RASLWKEDHTCLRWLDGRAARRSVVYVNYGCVTTMSNQDLVEFAWGLASSGYDFLWIIRP
DLVKGETAVLPPEFVESTKGRCLLASWCEQEAVLRHEAVGVFLTHSGWNSMTESLSAGVP
MLCWPFFAEQQTNRRYACTEWGVGMEVDGDVRREALAATIREAMAGDKGKEMKRRADEWK
EAAIRATQPGGTALTNLDDLIKNHVLLPKC

Transcript Sequence

Transcript ID

EES05311
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:54299577:54302278:1 gene:SORBI_3004G191000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCATTCACTACTCCACAGAAAATTCCTGAACGTATATAGCACAGCATTACTCCCTCCTTT
TCCGGCCGACGAGCGAGAGCTGAGAGATGGCAGCCGGCGACAACACCAAGCCGCACGCGG
TGTGCGTCCCGTTCCCGGCGCAGGGCCACGTGACGCCGATGATGAAGCTGGCCAAGGTCC
TCTACTGCAAGGGCTTCCACATCACCTTCGTCAACACCGAGTACAACCACCGCCGCCTGA
TCCGGTCCCGGGGCCCCCAGGCCGTCGCGGGCCTCCCGGGCTTCCGCTTCGCCACCATCC
CTGACGGCCTGCCGCACTCGGACGCCGACGCCACGCAGGACCCCGCCGCGATCTGCGACT
CCACCATGAAGACCTGCCTCCCGCACCTCAAGCGCCTGCTCGACCGCCTCAACCACGACG
CCGCCGGCGATGGCGAGCAGGTGCCGCCGCCGCCGCCGCCGGTGACGTGCGTCGTGGCCG
ACAACGTCACCAGCTTCTGCCTGGACGCTGCCAAGGACATCGGCGTGCCTTGCCTGCTCT
TCTGGACGGCCAGCGCCTGCGGCTACCTGGGCTACCGCCACTTCCAGTTCCTCATGGACG
AAGGCCTTGCGCCTCTCAAAGACGAGGCGCAGCTGACGAACGGGTACCTGGACACGCCGG
TGGGGTGGGCGCGCGGGATGAGCAAGCACATGCGGCTCAGGGACTTCCCGAGCTTCATCT
ACACGATGCAGCGCGGCGACATCCTGCTGGACTTCATGATGCACGAGGTGTCGCGGACGA
ACGCCGCCGCCGCCGTCATCCTCAACACCTTCGACGAGCTCGAGCCAGAGGCGCTGGACG
CCATGCGCGCCATCCTGCCGCCGCCCGTCTACACCATCGGCCCGCTCAGTCTCCTCCTCG
AGCGGCTGGTGGCCACCGCCGCCGCCGCCGTCCCTGAACCTGGCGACGACGTCGTCGTCG
TCGACGCCGCCGCGCTCGGCACGGTCCGCGCCAGCCTCTGGAAGGAAGACCACACCTGCC
TGCGGTGGCTGGACGGCAGGGCGGCCCGCCGGTCCGTGGTGTACGTGAACTACGGGTGCG
TCACCACCATGTCGAACCAGGACCTGGTGGAGTTCGCGTGGGGGCTGGCGAGCAGCGGCT
ACGACTTCCTGTGGATCATCCGGCCGGACCTGGTGAAGGGCGAGACGGCGGTGCTGCCGC
CGGAGTTCGTGGAGTCCACCAAGGGCAGGTGCCTCCTGGCGAGCTGGTGCGAGCAGGAGG
CGGTGCTGCGGCACGAGGCGGTGGGGGTGTTCCTGACGCACAGCGGGTGGAACTCCATGA
CGGAGAGCCTCAGCGCGGGCGTGCCCATGCTGTGCTGGCCCTTCTTCGCGGAGCAGCAGA
CCAACCGTCGGTACGCGTGCACCGAGTGGGGCGTGGGGATGGAGGTCGACGGCGACGTGC
GGCGGGAGGCTCTGGCGGCAACGATACGGGAGGCAATGGCCGGCGACAAGGGGAAGGAGA
TGAAGCGGAGGGCGGACGAGTGGAAGGAGGCCGCCATTCGGGCCACGCAGCCTGGCGGCA
CGGCGTTGACCAACCTGGACGACCTAATCAAGAATCACGTCCTGCTACCTAAGTGCTGAC
GGCTCTTTCCTGAAAAATAATTTTAGTTTCTATACTTAGCCAAACTATCTAAAGTTTGAC
TAAATTAATAAGAGTAATATGGAAAAGTAAAAAATTAATTATACTTATTTGGTTTCAATA
ACTATGATATTTTTAGATAAACTTTGCCAAAACACAAATGCTAGTTTCATGTAAAGTCGC
TCTAAGCCCTATTGAATAAGCTGATAAGTGTTGGTGTACTTATATATAACAAAGGGCACA
AGAAAGTAAAGGGCTGCTTGATTCATGCAGTGGCTTTGCCTCGTCTTGTGGAGGCTCTGG
CGGCAACGATAACTGTTTTGTGTTCTATCCTTGGATTAAAGGACACTACAAATCAAATCT
TTCAAGCATTCAACAGTTTTTTTAATAATAAATTAGCTAATAATATTTTTTGCCAAAAAA
GTTGGGAGGTACTGGTCAAAAAGTGTGTGCCATCGGTCTTCACCTGCTCAATTTATGCAG
TAAACTACCGTAAGTCAAGAAAAGCTAGTATATATAGGGAGTGTTTGGTTCACGTTTTCA
ACTTGGCCTGGCTAGCCAACTAAGCCAGGGTACCCAAGCCTGGCTCTCCCAATGCAAGAG
GCAGTTGTTTGGTTCACTTGTCTTAGCTAAGCCTGGATTGCTTTGATCATGTTTGGTTGT
CTGCTCAGCTTAAATACAGTTACCTCTTCCTTGTTCTGGTAGCTTTACCTCTTTGAGACA
TTACATCGAACAGTTGGTGAGCGGCCGCTAGAATCTCCACCGCGCTGTGGCATACGAACT
CCCTGGCCATGGCTATCGATGCTGTGCCACTGCCACTGCCCGTGACATGGACGAGGAGGA
CAGATTCACCTTCGTCGCCGTCGATGTCGATGGTGCCTTCCCAGATGCCCGGTGGAGGAC
GCCTTCCCAGATGCCCGGAAGAGGAGGACGCCGATGGCCACCGTGCGGGTGCCGCTCGGG
CGGCTCCTCCTGGAAGAGCCGTGGTGCGAC