Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05221
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:52449747:52453656:1 gene:SORBI_3004G172100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGGACGGCACGGAGCTGTCCCAGAGCACGCTGGTGTTTGGGCTCCGCATGTGGGTG
CTCGTCGGCATCGGCGTCGGTGCCGCCTTCGTGCTGCTGCTCGTCCTAATCTCCGTCCTC
TGCCTCCTCGCCTTCCGCCGCCGGCGGCGGCAGCGGCCGCGGCCCAATCCCGCCCAGCAG
CTCCCAACCACCGCGCCTCCCAAGAGTCCCGCGAATGTCAAGGCGCCCAAGGATATCCAA
GAAGTCCCCTCCCACACCGCCACCGCCGCCGCCGCCGTCGCCCCAGCGAAGATGCCGCTC
GCGCAGGTGCTCCAGCTCCCCACGCCAGCTGTCTCCGAGCAGATCGTGACCGGCAAGGAG
CACCACGTCACGTACCCGGAGCAGCAGGAGCACCCCAGCCACCGGAGCGACGGGCCTTCG
CCGCGCGGCAACGGCGAGAGCCGCGGTGGGCGAGGTGGCGGCGCCGCGGACCACGCGCCA
CCGGCCGTGCCGGAGGTGTCCCACCTGGGGTGGGGCCACTGGTACACGCTCAAGGAGCTG
GAGACGGCGACCGGGATGTTCGCCGACGGGAACGTGATCGGCGAGGGCGGGTACGGGATC
GTGTACCGTGGCGTGCTCGAGAACGGCACGCAGGTCGCCGTCAAGAACTTGCTAAACAAC
AGGGGGCAGGCAGAGAAGGAATTCAAGGTTGAGGTCGAAGCAATCGGGCGTGTGCGACAC
AAGAACCTTGTGCGCCTTCTAGGATATTGTGCCGAGGGTAATCAGAGGATGCTTGTATAT
GAGTATGTTGATAACGGGAACTTAGAACAATGGCTGCACGGGGATGTTGGGCCTGTAAGC
CCTCTCACCTGGGATGACAGAATGAAAATCATACTGGGAACAGCAAAAGGGATAATGTAT
TTGCATGAGGGGCTTGAACCAAAAGTGGTTCACCGTGATGTCAAGTCAAGCAACATCCTT
CTGGACAAGCATTGGAATGCTAAGCTCTCGGATTTCGGACTTGCAAAGCTTCTGGGTTCA
GAAAGGAGTTATGTCACTACAAGAGTTATGGGAACTTTTGGGTATGTTGCTCCAGAGTAC
GCAGGGACTGGAATGTTGAATGAAACAAGTGACATATATAGTTTTGGAATTCTTATAATG
GAGATAATATCCGGTAGGGTACCAGTGGATTATAATAGGCCACCAGGAGAGGTTAATTTA
GTTGATTGGCTTAAGACGATGGTAAGCACCCGAAACTCAGATGGCGTTGTGGATCCAAAG
ATACCCAAGAAACCTTCTTCAAGAGCAGTGAAGAAGGCTTTGCTAGTGGCGCTGCGATGT
GTAGACCCTGATGCTCTTAAGAGACCACGGATTGGGCACATCATTCACATGCTTGAAGTC
GATGATTTCCCATACAGAGATGATCGCCGAGGCAGTAGAGCACCAGGACAAGCAAGATTA
CCGGAGACACCGGCAGGTGGATCAGGTCAACCTGAGACCGACAATAGAGGAAACGGTGGT
TCCACACAAGCTGAACCCTTTAGATGGAGGAACCCAGAGGCTTAG

Peptide Sequence

PEP ID

EES05221
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:52449747:52453656:1 gene:SORBI_3004G172100 transcript:EES05221 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSDGTELSQSTLVFGLRMWVLVGIGVGAAFVLLLVLISVLCLLAFRRRRRQRPRPNPAQQ
LPTTAPPKSPANVKAPKDIQEVPSHTATAAAAVAPAKMPLAQVLQLPTPAVSEQIVTGKE
HHVTYPEQQEHPSHRSDGPSPRGNGESRGGRGGGAADHAPPAVPEVSHLGWGHWYTLKEL
ETATGMFADGNVIGEGGYGIVYRGVLENGTQVAVKNLLNNRGQAEKEFKVEVEAIGRVRH
KNLVRLLGYCAEGNQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDDRMKIILGTAKGIMY
LHEGLEPKVVHRDVKSSNILLDKHWNAKLSDFGLAKLLGSERSYVTTRVMGTFGYVAPEY
AGTGMLNETSDIYSFGILIMEIISGRVPVDYNRPPGEVNLVDWLKTMVSTRNSDGVVDPK
IPKKPSSRAVKKALLVALRCVDPDALKRPRIGHIIHMLEVDDFPYRDDRRGSRAPGQARL
PETPAGGSGQPETDNRGNGGSTQAEPFRWRNPEA

Transcript Sequence

Transcript ID

EES05221
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:52449747:52453656:1 gene:SORBI_3004G172100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCCTCTTTGCTTGCTGGCTCTGTCTTCTCTTCCACCTCCATGCATGCAGAGGAGCAGCA
CCCTCATTACTCCACATTACTCTCCCTCCACTCCATTCCTCCTCCTCACTGTCCTCTCCA
CTCCTCGTCTGATCGATCCTCTCCGTCTCCGAGAGAGAAGTCGTCGCTCTCACTCACTCT
GCCACATCCCATCGACAGTTCTGCAACCAACGCATCAAGCAACCATTCACTCCTCCCTCT
GCCTGTACTGTCTTCTTCGTTTTGCTGCCGCTGGGATCCTCGTCACGCCAGCCGCCCACC
GCCAGCCACCAGCTACACCACCTCTGGTCTCCAGTCACACCAGAATCCAAATTTTTCATC
ACACCAAACCATCCACTCCTCACTTTTTCCCCCTACCAAGTCCAATCTTTAGTTCTTTAC
AACCACATTATTATCGCCAACAACAGCCCCCTTCCCTTCCTTTCGCACCCGATTACCCAC
CCAAATCCAGCTACTGCCTACTGTGCACGGAGTTGCTTGCGGCATTTGCCACACTGTTCC
ATCCGCAGAACGAACCCAATCTTTACCGCCCGATTCTCGGCAAAATCCACCGTGCTTGCC
CCCCGTTTCAGTCCAGGCAATGCTGTTTGCGCCGTGGAATCAGAGCTTTGACACCTAATT
CCGCTCAAGAACACGAGGAAGATCCGCCAATTTGCGAGAAGAACCAACAGGCTCCACTCC
ATCCAAGGCGGCGTCGCCCTGGCGTCTCGCGCTCCGCCAGCAGCTCCCATGTCGGACGGC
ACGGAGCTGTCCCAGAGCACGCTGGTGTTTGGGCTCCGCATGTGGGTGCTCGTCGGCATC
GGCGTCGGTGCCGCCTTCGTGCTGCTGCTCGTCCTAATCTCCGTCCTCTGCCTCCTCGCC
TTCCGCCGCCGGCGGCGGCAGCGGCCGCGGCCCAATCCCGCCCAGCAGCTCCCAACCACC
GCGCCTCCCAAGAGTCCCGCGAATGTCAAGGCGCCCAAGGATATCCAAGAAGTCCCCTCC
CACACCGCCACCGCCGCCGCCGCCGTCGCCCCAGCGAAGATGCCGCTCGCGCAGGTGCTC
CAGCTCCCCACGCCAGCTGTCTCCGAGCAGATCGTGACCGGCAAGGAGCACCACGTCACG
TACCCGGAGCAGCAGGAGCACCCCAGCCACCGGAGCGACGGGCCTTCGCCGCGCGGCAAC
GGCGAGAGCCGCGGTGGGCGAGGTGGCGGCGCCGCGGACCACGCGCCACCGGCCGTGCCG
GAGGTGTCCCACCTGGGGTGGGGCCACTGGTACACGCTCAAGGAGCTGGAGACGGCGACC
GGGATGTTCGCCGACGGGAACGTGATCGGCGAGGGCGGGTACGGGATCGTGTACCGTGGC
GTGCTCGAGAACGGCACGCAGGTCGCCGTCAAGAACTTGCTAAACAACAGGGGGCAGGCA
GAGAAGGAATTCAAGGTTGAGGTCGAAGCAATCGGGCGTGTGCGACACAAGAACCTTGTG
CGCCTTCTAGGATATTGTGCCGAGGGTAATCAGAGGATGCTTGTATATGAGTATGTTGAT
AACGGGAACTTAGAACAATGGCTGCACGGGGATGTTGGGCCTGTAAGCCCTCTCACCTGG
GATGACAGAATGAAAATCATACTGGGAACAGCAAAAGGGATAATGTATTTGCATGAGGGG
CTTGAACCAAAAGTGGTTCACCGTGATGTCAAGTCAAGCAACATCCTTCTGGACAAGCAT
TGGAATGCTAAGCTCTCGGATTTCGGACTTGCAAAGCTTCTGGGTTCAGAAAGGAGTTAT
GTCACTACAAGAGTTATGGGAACTTTTGGGTATGTTGCTCCAGAGTACGCAGGGACTGGA
ATGTTGAATGAAACAAGTGACATATATAGTTTTGGAATTCTTATAATGGAGATAATATCC
GGTAGGGTACCAGTGGATTATAATAGGCCACCAGGAGAGGTTAATTTAGTTGATTGGCTT
AAGACGATGGTAAGCACCCGAAACTCAGATGGCGTTGTGGATCCAAAGATACCCAAGAAA
CCTTCTTCAAGAGCAGTGAAGAAGGCTTTGCTAGTGGCGCTGCGATGTGTAGACCCTGAT
GCTCTTAAGAGACCACGGATTGGGCACATCATTCACATGCTTGAAGTCGATGATTTCCCA
TACAGAGATGATCGCCGAGGCAGTAGAGCACCAGGACAAGCAAGATTACCGGAGACACCG
GCAGGTGGATCAGGTCAACCTGAGACCGACAATAGAGGAAACGGTGGTTCCACACAAGCT
GAACCCTTTAGATGGAGGAACCCAGAGGCTTAGTATGATAATATTCGTAGTATTCGTCGG
ACGACTGAAAGAAAAGCCAAATCCTCTTGATTTGTGAAGCAACAAGCCAACAATTATATC
CACTGAAGTCGTGAACTTTCATCTTGCTGATGAAAGCAGCAGGATTTCCATGGATACCGT
TAGATCATCTGTAAATGTAAAAAGAGTAATTTAGCCCCAGTAAATTTTCCTACTTATATT
TATATAGGTGGAGGTATCTATGTATGACAAACCCGTTCCATTTAAGGTAAAATAGAACTT
TATTAAAATCCCTCGGGTACCTCTGGTTAAGAAATGGACAGTTTCTGCTCAGCATTGCTG
AACTTGACATGCTGTATATTATTTAATATTTTAACACCAAGTC