Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05171
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:51311401:51316781:1 gene:SORBI_3004G163800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGATCGCGGAGGTGGCTCTCCACACCATGCCGGGGGCATTCACCACCCACTCCCCG
GCATCCATTCTGTCCCTCAGGGCAGTCGCTAGGAGGAGGAACAAGAACACTGATTCGGTG
CCCAACACCAGGGCACTGCAAGGCCTCCTAAGGATTCCGAGGCTGAGGTCCGTCAGGCGG
CTGTGCCAGCGGATAGACGACATTGCGAGGGTCACAGAGGGGAATGGGACTTGGGTCAAG
GAAGCCATGAATAACGCCGGCCAGGTTCTTGGCGACATCAGCGTGCCTGGTCAGGCTGTA
GGTGGCAATGGTAGCCTAAATGGGAGTGTTGCCAAGCCTCCACCTCAGAGGCGGAAGTCC
TCATCGGTTGAGGATGAGGCCTGGGAACTTCTGCAGGAGTCAATGGTTTACTATTGTGGT
AGTCCTGTTGGGACAATTGCTGCCAACGATCCAAATGACAGTGATCCGGTGAACTATGAT
CAGGTGTTTATTCGGGACTTCATACCATCTGGCATTGCTTTTCTACTGAAGGGGGAATAT
GAAATTGTGCGTAATTTCATTCTACACACCCTTCAGCTTCAGAGCTGGGAGAAGACAATG
GACTGCCATAGTCCAGGTCAAGGTTTAATGCCCGCCAGCTTCAAAGTGCGGACAATTCCG
CTTGATGGTGATGAGGATGCAACTGAGGAGGTCTTGGATCCTGATTTTGGGGAGGCCGCA
ATAGGCCGTGTGGCACCTGTTGATTCAGGTCTATGGTGGATCATATTGCTTAGGGCATAT
GGAAAGTGTTCAGGGGATCTGTCAGTACAGGAGAGAATTGATGTCCAGACTGGAATGAAA
ATGATTCTGAAGCTTTGTTTAGCTGATGGTTTCGACATGTTCCCTACATTACTCGTAACT
GATGGTTCATGCATGATTGATCGTCGAATGGGAATCCATGGGCATCCACTTGAAATTCAG
GCACTCTTCTATTCAGCCCTCTTGTGTGCGCGTGAGATGTTGGCTCAAGAAGACGGATCA
GCTGACTTAATCCGCGCCCTGAACAATAGACTTATTGCACTGTCCTTTCATATCAGGGAG
TACTACTGGCTTGACATGCAAAAGTTGAATGAGATATATCGATATAAAACAGAAGAATAT
TCTTATGATGCTGTCAACAAATTCAACATATACCCCGATCAGATATCTCCATGGCTTGTT
GAGTGGATACCTCCTAAGGGGGGTTACTTTATTGGAAACCTCCAGCCAGCTCATATGGAC
TTCCGATTCTTTTCATTGGGAAATTTATGGTCAATAGTAAGCAGCTTGGCAACAACTCAT
CAGTCGCATGCCATTTTAGACCTTATCGAGTCTAAATGGTCTGATTTAGTGGCAGAGATG
CCACTAAAGATATGCTATCCTGCTCTTGAGAACCAGGAATGGAAAATCATCACTGGGAGT
GATCCTAAAAACACGCCTTGGTCGTACCACAATGGAGGATCCTGGCCAACATTACTGTGG
CAGCTCACAGTGGCATGCATCAAGATGAACAGACCAGAGCTTGCAGCCAAAGCTATAGAG
GTAGCTGAGAGGCGTATTGCTACAGACAAATGGCCTGAATACTACGACACCAAGAGAGCA
CGCTTCATTGGGAAACAGGCACGGCTGTACCAAACGTGGTCAATTGCTGGGTTCCTAGTA
GCCAAGCTACTGATAGAAAAACCAGATGCTGCTAGGATTCTGTGGAACGATGAGGATGCA
GAAATCCTTAATGCTTTGAGCACAAACAGAAAACGGGGCAAGAAAGTGTTGAAGAAAACA
TACATTGTGTGA

Peptide Sequence

PEP ID

EES05171
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:51311401:51316781:1 gene:SORBI_3004G163800 transcript:EES05171 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGIAEVALHTMPGAFTTHSPASILSLRAVARRRNKNTDSVPNTRALQGLLRIPRLRSVRR
LCQRIDDIARVTEGNGTWVKEAMNNAGQVLGDISVPGQAVGGNGSLNGSVAKPPPQRRKS
SSVEDEAWELLQESMVYYCGSPVGTIAANDPNDSDPVNYDQVFIRDFIPSGIAFLLKGEY
EIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTIPLDGDEDATEEVLDPDFGEAA
IGRVAPVDSGLWWIILLRAYGKCSGDLSVQERIDVQTGMKMILKLCLADGFDMFPTLLVT
DGSCMIDRRMGIHGHPLEIQALFYSALLCAREMLAQEDGSADLIRALNNRLIALSFHIRE
YYWLDMQKLNEIYRYKTEEYSYDAVNKFNIYPDQISPWLVEWIPPKGGYFIGNLQPAHMD
FRFFSLGNLWSIVSSLATTHQSHAILDLIESKWSDLVAEMPLKICYPALENQEWKIITGS
DPKNTPWSYHNGGSWPTLLWQLTVACIKMNRPELAAKAIEVAERRIATDKWPEYYDTKRA
RFIGKQARLYQTWSIAGFLVAKLLIEKPDAARILWNDEDAEILNALSTNRKRGKKVLKKT
YIV

Transcript Sequence

Transcript ID

EES05171
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:51311401:51316781:1 gene:SORBI_3004G163800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGACCGTGGCCTTCCCCGTTTCGTCTCCGGTCCTCCTCCTTTTATCCCCTCTCGCCCTTG
CTCTCCTCCGTCCCACCTATTTCCTCCTTCCGCCCTCCGCCGCGCTTGGCCTTCTCCCTT
CTCGAGAGGCCACGCTCCATCCCCGCCCGCGCTCCGCCTCCCCTGGCGACCGGCGGCGAG
CGCAGCCCAACGAAAGCGTCGTAGTCATCCGGTAAGAGCTCCTTGCTTTTCTCCACGCGC
TGCTCCTGCCGTTACGCAAAGCTTTGTTTGATCCCCTCCTCGTTGGACGAGATGAGAAAA
AAAGTTGCTGCCTTTTGTTCATGTGCTCCTGCATAGAAACTCTGGATTTGCCCTCCGTTG
GAAATTTTGGATTAATAGCGATTTGCCACGCTTCGTTTTACTCCAAATCCGTTCGATTCT
TGCTGGGTTGCTCTGATTAGATCTTTTTTTTTTGGTATGAATGGTATCCAACTGCTGCTA
ATTGTAGCCGTCACGCTTCTTGCAGACGCTCGGCTGGTTGGGGAACAAGGCGCCAATGGG
GATCGCGGAGGTGGCTCTCCACACCATGCCGGGGGCATTCACCACCCACTCCCCGGCATC
CATTCTGTCCCTCAGGGCAGTCGCTAGGAGGAGGAACAAGAACACTGATTCGGTGCCCAA
CACCAGGGCACTGCAAGGCCTCCTAAGGATTCCGAGGCTGAGGTCCGTCAGGCGGCTGTG
CCAGCGGATAGACGACATTGCGAGGGTCACAGAGGGGAATGGGACTTGGGTCAAGGAAGC
CATGAATAACGCCGGCCAGGTTCTTGGCGACATCAGCGTGCCTGGTCAGGCTGTAGGTGG
CAATGGTAGCCTAAATGGGAGTGTTGCCAAGCCTCCACCTCAGAGGCGGAAGTCCTCATC
GGTTGAGGATGAGGCCTGGGAACTTCTGCAGGAGTCAATGGTTTACTATTGTGGTAGTCC
TGTTGGGACAATTGCTGCCAACGATCCAAATGACAGTGATCCGGTGAACTATGATCAGGT
GTTTATTCGGGACTTCATACCATCTGGCATTGCTTTTCTACTGAAGGGGGAATATGAAAT
TGTGCGTAATTTCATTCTACACACCCTTCAGCTTCAGAGCTGGGAGAAGACAATGGACTG
CCATAGTCCAGGTCAAGGTTTAATGCCCGCCAGCTTCAAAGTGCGGACAATTCCGCTTGA
TGGTGATGAGGATGCAACTGAGGAGGTCTTGGATCCTGATTTTGGGGAGGCCGCAATAGG
CCGTGTGGCACCTGTTGATTCAGGTCTATGGTGGATCATATTGCTTAGGGCATATGGAAA
GTGTTCAGGGGATCTGTCAGTACAGGAGAGAATTGATGTCCAGACTGGAATGAAAATGAT
TCTGAAGCTTTGTTTAGCTGATGGTTTCGACATGTTCCCTACATTACTCGTAACTGATGG
TTCATGCATGATTGATCGTCGAATGGGAATCCATGGGCATCCACTTGAAATTCAGGCACT
CTTCTATTCAGCCCTCTTGTGTGCGCGTGAGATGTTGGCTCAAGAAGACGGATCAGCTGA
CTTAATCCGCGCCCTGAACAATAGACTTATTGCACTGTCCTTTCATATCAGGGAGTACTA
CTGGCTTGACATGCAAAAGTTGAATGAGATATATCGATATAAAACAGAAGAATATTCTTA
TGATGCTGTCAACAAATTCAACATATACCCCGATCAGATATCTCCATGGCTTGTTGAGTG
GATACCTCCTAAGGGGGGTTACTTTATTGGAAACCTCCAGCCAGCTCATATGGACTTCCG
ATTCTTTTCATTGGGAAATTTATGGTCAATAGTAAGCAGCTTGGCAACAACTCATCAGTC
GCATGCCATTTTAGACCTTATCGAGTCTAAATGGTCTGATTTAGTGGCAGAGATGCCACT
AAAGATATGCTATCCTGCTCTTGAGAACCAGGAATGGAAAATCATCACTGGGAGTGATCC
TAAAAACACGCCTTGGTCGTACCACAATGGAGGATCCTGGCCAACATTACTGTGGCAGCT
CACAGTGGCATGCATCAAGATGAACAGACCAGAGCTTGCAGCCAAAGCTATAGAGGTAGC
TGAGAGGCGTATTGCTACAGACAAATGGCCTGAATACTACGACACCAAGAGAGCACGCTT
CATTGGGAAACAGGCACGGCTGTACCAAACGTGGTCAATTGCTGGGTTCCTAGTAGCCAA
GCTACTGATAGAAAAACCAGATGCTGCTAGGATTCTGTGGAACGATGAGGATGCAGAAAT
CCTTAATGCTTTGAGCACAAACAGAAAACGGGGCAAGAAAGTGTTGAAGAAAACATACAT
TGTGTGAGTTCTCGCAGCAAGTTCCATCAAATAACCAAAGTTAGCATTTTTAAGTTATAG
GAAGTATCGTTCCTGTATATAAACTTACATGAGGTTGCATTTTTGATGGGGAAGGTGCCT
GCTGTTGGATGCTGTTATTATGGATGCATCTGGCTTTGCAACAAAGCTCTTGCTTGAGCA
TAGACCTGCCTCGTGTAGTTTGCTATACACTTCATTTGGCATGACAAGTTTTCTGGAGTC
TCATTACCAAACTTAAAACTTTTGGTTCCTGGAATTACCTCGATTCTCTGGTTTT