Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05163
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:51099644:51106292:1 gene:SORBI_3004G161900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCACGGCCAACGGCCAGCAGCCGGCGGCGGAGGGCGCTTCCTCTGACAAGCTCCGC
CACGTCGAGTCCATGTCGGAGCTGCCCTCCGGCGCCGGCAAGATCTCCGGGATCAACGCC
GTCGTGCTCGGGGAGTCGCTCGCCGCCGAGGAGAACGACCTCATCTTCCCCAGCTCCGAC
TTCTCTGCCAACGCTCTCGTCTCCTCTCCGAAACAGTATCGGGAGATGTATGAGAGGTCC
ATCAAGAACCCGGCTGGGTTCTGGTCGGAGATTGCCGAGACATTTTACTGGAAGGAGAAG
TGGAACCCTGCCGAAGTCTGCTCGGAGAACCTCGATGTCACCAAGGGACCCGTCCAGATC
AACTGGTTCAAGGGAGGGAAAACTAACATATGTTACAACGCTGTTGACCGCAACATCGAG
TCTGGCAATGGGGACAAGATTGCAATGTACTGGGAGGGTAATGAGCCCAGTCAGGATGGG
AAGCTCACCTATTCCGAGCTCCTGGAGAAGGTTTGCCAGCTTGCAAATTACTTGAAGAGC
CTTGGTGTCGGCAAGGGTGATGCTGTTATTATCTACTTACCAATGCTACTGGAGCTTCCC
ATTGCCATGCTTGCCTGTGCCCGCATTGGTGCTGTCCACTCGGTTGTGTTTGCTGGCTTC
TCAGCAGATTCTCTAGCCCAAAGGATTGTTGATTGCAAGCCGAAGCTTGTCATCACGTGC
AATGCTGTGAAGCGGGGAGTCAAGCCCATCTTTCTCAAAGATATAGTGGATGTGGCTTTG
GTCGAAAGTGAGAAGAATGGAGTCTCTGTAGGTCTCTGCTTGACGTATGAAAATCAGTCA
GCCATGAAGAGGGAAGACACAAAATGGCAACCAGAAAGGGATGTTTGGTGGCAGGATGTC
GTGACCAAATTTCCAACCAAATGTGATGTGGAATGGGTGGATGCCGAGGATCCATTGTTC
CTTTTGTACACAAGTGGCAGCACAGGGAAGCCAAAGGGTGTGTTGCATACTTCTGGGGGC
TACATGGTGTATACTGCAACAACCTTTAAGTACGCATTTGACTACAAGCCAACTGACATA
TACTGGTGCACTGCAGACTGTGGCTGGATTACTGGACATAGTTATGTAACATATGGTCCT
CTCCTGAATGGTGCTACGGTTCTCGTTTTTGAAGGGACTCCGAACTACCCTGATTCAGGC
CGATGCTGGGACATTGTCGACAAGTACAATGTGACAATATTTTATACTGCCCCAACTCTT
GTTCGTTCACTCATGCGTGATGGCACTGAGTATGTCACACGTTACTCTCGAAAGTCTCTA
CGAGTCCTGGGAAGTGTTGGTGAGCCAATCAATCCTAGTGCATGGAGATGGTTCTACAAT
ATTGTTGGGGATTCCCGGTGCCCCATATCAGACACCTGGTGGCAAACTGAAACTGGCGGT
TTCATGATCACCCCTTTGCCTGGCGCCTGGCCTCAGAAACCGGGTTCTGCAACCTTTCCT
TTCTTTGGTGTTCAGCCAGTCATTGTTGATGAGAAAGGGCAAGAGATTGAAGGGGAATGC
AGTGGATATCTTTGCATAAAGAAATCATGGCCTGGGGCTTTCCGGACTCTGTATGGAGAT
CATGAGAGATATGAGACCACATACTTCAAACCATTTGCTGGGTACTATTTCACTGGTGAT
GGTTGCAGCAGAGACAAAGATGGTTATCACTGGCTGACTGGAAGAGTAGATGATGTCATC
AATGTCAGTGGACACCGAATCGGCACTGCCGAGGTTGAGTCAGCTTTGGTGTCACATCCA
CAGTGTGCAGAGGCTGCTGTTGTTGGTGTTGAGCATGAGGTCAAAGGTCAAGGAATTTAT
GCTTTTGTAACTTTGGTGGATGGTGTTCCGTATAGTGAGGAACTACGAAAAAGCCTTATA
ATGACAGTGCGCAACCAGATTGGGGCATTTGCAGCTCCTGACAAGATCCACTGGGCACCA
GGACTTCCTAAAACCCGGAGTGGCAAGATCATGCGAAGGATTTTGCGTAAAATTGCTGCA
CGGCAACTGGATGAACTTGGGGACATAAGCACCCTTGCTGAACCTGCTGTAGTTGACCAG
CTTATTGCGCTCAGCGATTGCTAG

Peptide Sequence

PEP ID

EES05163
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:51099644:51106292:1 gene:SORBI_3004G161900 transcript:EES05163 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGTANGQQPAAEGASSDKLRHVESMSELPSGAGKISGINAVVLGESLAAEENDLIFPSSD
FSANALVSSPKQYREMYERSIKNPAGFWSEIAETFYWKEKWNPAEVCSENLDVTKGPVQI
NWFKGGKTNICYNAVDRNIESGNGDKIAMYWEGNEPSQDGKLTYSELLEKVCQLANYLKS
LGVGKGDAVIIYLPMLLELPIAMLACARIGAVHSVVFAGFSADSLAQRIVDCKPKLVITC
NAVKRGVKPIFLKDIVDVALVESEKNGVSVGLCLTYENQSAMKREDTKWQPERDVWWQDV
VTKFPTKCDVEWVDAEDPLFLLYTSGSTGKPKGVLHTSGGYMVYTATTFKYAFDYKPTDI
YWCTADCGWITGHSYVTYGPLLNGATVLVFEGTPNYPDSGRCWDIVDKYNVTIFYTAPTL
VRSLMRDGTEYVTRYSRKSLRVLGSVGEPINPSAWRWFYNIVGDSRCPISDTWWQTETGG
FMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGQEIEGECSGYLCIKKSWPGAFRTLYGD
HERYETTYFKPFAGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHP
QCAEAAVVGVEHEVKGQGIYAFVTLVDGVPYSEELRKSLIMTVRNQIGAFAAPDKIHWAP
GLPKTRSGKIMRRILRKIAARQLDELGDISTLAEPAVVDQLIALSDC

Transcript Sequence

Transcript ID

EES05163
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:51099644:51106292:1 gene:SORBI_3004G161900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGTAGCACTGAGGATCGGTCATCACCGTTTATAAGGAAGACTCCACCAGTAGCCATCGC
TGCCGCCCGCCCACCCCCCGCCCGGATCTCGCTGCCTCTCCCACCCCTGCTCGCAAGTCG
CCGTCGCCAGCCACCGTCATGGGCACGGCCAACGGCCAGCAGCCGGCGGCGGAGGGCGCT
TCCTCTGACAAGCTCCGCCACGTCGAGTCCATGTCGGAGCTGCCCTCCGGCGCCGGCAAG
ATCTCCGGGATCAACGCCGTCGTGCTCGGGGAGTCGCTCGCCGCCGAGGAGAACGACCTC
ATCTTCCCCAGCTCCGACTTCTCTGCCAACGCTCTCGTCTCCTCTCCGAAACAGTATCGG
GAGATGTATGAGAGGTCCATCAAGAACCCGGCTGGGTTCTGGTCGGAGATTGCCGAGACA
TTTTACTGGAAGGAGAAGTGGAACCCTGCCGAAGTCTGCTCGGAGAACCTCGATGTCACC
AAGGGACCCGTCCAGATCAACTGGTTCAAGGGAGGGAAAACTAACATATGTTACAACGCT
GTTGACCGCAACATCGAGTCTGGCAATGGGGACAAGATTGCAATGTACTGGGAGGGTAAT
GAGCCCAGTCAGGATGGGAAGCTCACCTATTCCGAGCTCCTGGAGAAGGTTTGCCAGCTT
GCAAATTACTTGAAGAGCCTTGGTGTCGGCAAGGGTGATGCTGTTATTATCTACTTACCA
ATGCTACTGGAGCTTCCCATTGCCATGCTTGCCTGTGCCCGCATTGGTGCTGTCCACTCG
GTTGTGTTTGCTGGCTTCTCAGCAGATTCTCTAGCCCAAAGGATTGTTGATTGCAAGCCG
AAGCTTGTCATCACGTGCAATGCTGTGAAGCGGGGAGTCAAGCCCATCTTTCTCAAAGAT
ATAGTGGATGTGGCTTTGGTCGAAAGTGAGAAGAATGGAGTCTCTGTAGGTCTCTGCTTG
ACGTATGAAAATCAGTCAGCCATGAAGAGGGAAGACACAAAATGGCAACCAGAAAGGGAT
GTTTGGTGGCAGGATGTCGTGACCAAATTTCCAACCAAATGTGATGTGGAATGGGTGGAT
GCCGAGGATCCATTGTTCCTTTTGTACACAAGTGGCAGCACAGGGAAGCCAAAGGGTGTG
TTGCATACTTCTGGGGGCTACATGGTGTATACTGCAACAACCTTTAAGTACGCATTTGAC
TACAAGCCAACTGACATATACTGGTGCACTGCAGACTGTGGCTGGATTACTGGACATAGT
TATGTAACATATGGTCCTCTCCTGAATGGTGCTACGGTTCTCGTTTTTGAAGGGACTCCG
AACTACCCTGATTCAGGCCGATGCTGGGACATTGTCGACAAGTACAATGTGACAATATTT
TATACTGCCCCAACTCTTGTTCGTTCACTCATGCGTGATGGCACTGAGTATGTCACACGT
TACTCTCGAAAGTCTCTACGAGTCCTGGGAAGTGTTGGTGAGCCAATCAATCCTAGTGCA
TGGAGATGGTTCTACAATATTGTTGGGGATTCCCGGTGCCCCATATCAGACACCTGGTGG
CAAACTGAAACTGGCGGTTTCATGATCACCCCTTTGCCTGGCGCCTGGCCTCAGAAACCG
GGTTCTGCAACCTTTCCTTTCTTTGGTGTTCAGCCAGTCATTGTTGATGAGAAAGGGCAA
GAGATTGAAGGGGAATGCAGTGGATATCTTTGCATAAAGAAATCATGGCCTGGGGCTTTC
CGGACTCTGTATGGAGATCATGAGAGATATGAGACCACATACTTCAAACCATTTGCTGGG
TACTATTTCACTGGTGATGGTTGCAGCAGAGACAAAGATGGTTATCACTGGCTGACTGGA
AGAGTAGATGATGTCATCAATGTCAGTGGACACCGAATCGGCACTGCCGAGGTTGAGTCA
GCTTTGGTGTCACATCCACAGTGTGCAGAGGCTGCTGTTGTTGGTGTTGAGCATGAGGTC
AAAGGTCAAGGAATTTATGCTTTTGTAACTTTGGTGGATGGTGTTCCGTATAGTGAGGAA
CTACGAAAAAGCCTTATAATGACAGTGCGCAACCAGATTGGGGCATTTGCAGCTCCTGAC
AAGATCCACTGGGCACCAGGACTTCCTAAAACCCGGAGTGGCAAGATCATGCGAAGGATT
TTGCGTAAAATTGCTGCACGGCAACTGGATGAACTTGGGGACATAAGCACCCTTGCTGAA
CCTGCTGTAGTTGACCAGCTTATTGCGCTCAGCGATTGCTAGGTTGCAATGTAATATGGA
TGGTGGATACATCCTTTGAGTGAATGTTGCGTTTCTCTGTGTACTATGAGTAGAATGTGT
ATTTCAGTATCGAGAACTTAAGTGGGATATGATATGATGACATGTTGTCGATGTTTCTTT
TTAAACTTTTGTATGACTGTATCTGTATGAGATATCAACATATAGGTCCGATAGAATGTA
TTATTGATTGACACAATAAATATATTAATAAATTGCTA