Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES05140
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:49906689:49914808:1 gene:SORBI_3004G157400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCGGCGCGGGTGGATGCCGAGAAGGAAGCTCAGCACGAGCTGGAGGTGAAGGTG
GCCAAGTATTCGCGGGGTCAGGGTGCTGACTTGAAGGCGCTGGGGGACAAGAAGTTGAAA
GGGCAGCTCAGTGTAAAAGAAAAGCTATATGGCCAATCTGCAAAAGCTGCTGCAAAGGCC
GAAAAGTGGCTTATGCCGAATGATGGAGGTATTTTAGAGCCTGATCATTTGGAGAAGACA
TATAGATTTTCACAAAGGGATATATTGACGGAAGTGGATCTTTTGAGTTCAAGAAAACCA
TTTGATATGATCTTACCTGTGCTCGGTCCTTATAATATAGGATACACACCAAATGGCCGC
TACATGCTAGTAGGCGGACGAAAAGGCCATCTTGCAATGATGGATATGTTGCATATGGAT
CTTATCAAGGAGTTTGAGGTGAGGGAAACTGTTCGCGATGTGACATTCTTACACAATGAG
CAGTTGTATGCAGTCGCTCAAAAAAAGTACCCCTACATATATAATCGACATGGTACAGAA
ATTCATTGTCTGAAGGAACATGGAAAAGCATTGAAACTCCAATTTCTGTCTAAACAATTC
CTCTTGGCATCGATAAACAGCTTTGGGCAGCTCCACTACCAAGATGTGAGCACTGGTGAA
ATGGTTGCAAATTACAGGACAGGTCTGGGGCGTACCGATGTTATGCGGGCCAATCCTTAC
AATGCTGTCATTGGTCTTGGGCATGCTGGTGGCAAAGTTACCATGTGGAAACCAACCAGT
GTGAAACCCCTTGTTACTATGCTGTGCCATCATGGCCCAGTGACTGCTGTTGCATTTGAC
AGGGGCGGCCATCTTATGGCAACAGCAGGTGTTGACAGGAAGATAAAGATCTGGGACCTG
AGGAAGTATGAGGTTGTGCGCTCTTACCCACAGCGTGCTCAGTCCTTGGATTTTAGCCAG
AAGGGGCTGTTGGCCTGCAGCAATGGATCTCAGGTAGAGATATACAGGGATTTTGGTGGG
CATGATTATAAGCTTTACATGAAGCACAGAATATTGAAGGGCTATCAGGTTGGGAAGGTT
TTGTTCCGCCCCTATGAAGATATTCTGGGAATTGGGCACTCGATGGGCTTTTCTTCCATA
CTTGTTCCAGGTTCTGGTGAGCCGAACTTTGATACCTTTGTTGACAACCCCATGGAAACT
ACCAAGCAGAAACGTGAGAAGGAGGTACATGCTCTCCTTGATAAACTCCCGCCGGAGACT
ATCATGCTCAACCCAAACATGATAGCCACTGTAAGAGCTCCAAAGAAGAAAGAGAAGAAG
ACCAAGAAAGAGATTGAGGAAGAGATGGATGATGCCATTGAAGCTGCCAAGAACATTGAG
CGCAAGAAGAAGACCAAGGGTAGGAGCAAACCCAGCAAGCGGGCCAAGAAGAAAGAGGAA
GATGTTTTCAAAGCCAAGAGGCCCTTCCTGGAGCAATCCGAGGAGATCAATGGACGTCCT
GACAAGAAGCAGCGGATAGGCGAAGAGGTCGAACTCCCAAAAGCCTTGCAGCGGTTTGCC
AAGAAACCACAGTCATGA

Peptide Sequence

PEP ID

EES05140
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:49906689:49914808:1 gene:SORBI_3004G157400 transcript:EES05140 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPARVDAEKEAQHELEVKVAKYSRGQGADLKALGDKKLKGQLSVKEKLYGQSAKAAAKA
EKWLMPNDGGILEPDHLEKTYRFSQRDILTEVDLLSSRKPFDMILPVLGPYNIGYTPNGR
YMLVGGRKGHLAMMDMLHMDLIKEFEVRETVRDVTFLHNEQLYAVAQKKYPYIYNRHGTE
IHCLKEHGKALKLQFLSKQFLLASINSFGQLHYQDVSTGEMVANYRTGLGRTDVMRANPY
NAVIGLGHAGGKVTMWKPTSVKPLVTMLCHHGPVTAVAFDRGGHLMATAGVDRKIKIWDL
RKYEVVRSYPQRAQSLDFSQKGLLACSNGSQVEIYRDFGGHDYKLYMKHRILKGYQVGKV
LFRPYEDILGIGHSMGFSSILVPGSGEPNFDTFVDNPMETTKQKREKEVHALLDKLPPET
IMLNPNMIATVRAPKKKEKKTKKEIEEEMDDAIEAAKNIERKKKTKGRSKPSKRAKKKEE
DVFKAKRPFLEQSEEINGRPDKKQRIGEEVELPKALQRFAKKPQS

Transcript Sequence

Transcript ID

EES05140
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:49906689:49914808:1 gene:SORBI_3004G157400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGAAACCACACAAAGCCGCCGCCCGCCGCCCGCCGCCCTGCCACGGCAACGGCAAGAGAG
AGGGAAACCTGCCGCGCTTGGCGGCTCCCTCGACACCGTCGGCCGTCGCTTGGGACTCGT
CGGGTCGACCCCGTTTCCACCGGGCACCTCCTGTGAGACAGTCCACCCCCTCCCCCCAAT
TCGTTTCCTTCGGCCCTTGCCTCACTGGGCGTATTCGCTCCGCCCCACTGCCGGCCTTCC
GCCGTCTCTGTGGTGCGGCTTCGTCATGGCGCCGGCGCGGGTGGATGCCGAGAAGGAAGC
TCAGCACGAGCTGGAGGTGAAGGTGGCCAAGTATTCGCGGGGTCAGGGTGCTGACTTGAA
GGCGCTGGGGGACAAGAAGTTGAAAGGGCAGCTCAGTGTAAAAGAAAAGCTATATGGCCA
ATCTGCAAAAGCTGCTGCAAAGGCCGAAAAGTGGCTTATGCCGAATGATGGAGGTATTTT
AGAGCCTGATCATTTGGAGAAGACATATAGATTTTCACAAAGGGATATATTGACGGAAGT
GGATCTTTTGAGTTCAAGAAAACCATTTGATATGATCTTACCTGTGCTCGGTCCTTATAA
TATAGGATACACACCAAATGGCCGCTACATGCTAGTAGGCGGACGAAAAGGCCATCTTGC
AATGATGGATATGTTGCATATGGATCTTATCAAGGAGTTTGAGGTGAGGGAAACTGTTCG
CGATGTGACATTCTTACACAATGAGCAGTTGTATGCAGTCGCTCAAAAAAAGTACCCCTA
CATATATAATCGACATGGTACAGAAATTCATTGTCTGAAGGAACATGGAAAAGCATTGAA
ACTCCAATTTCTGTCTAAACAATTCCTCTTGGCATCGATAAACAGCTTTGGGCAGCTCCA
CTACCAAGATGTGAGCACTGGTGAAATGGTTGCAAATTACAGGACAGGTCTGGGGCGTAC
CGATGTTATGCGGGCCAATCCTTACAATGCTGTCATTGGTCTTGGGCATGCTGGTGGCAA
AGTTACCATGTGGAAACCAACCAGTGTGAAACCCCTTGTTACTATGCTGTGCCATCATGG
CCCAGTGACTGCTGTTGCATTTGACAGGGGCGGCCATCTTATGGCAACAGCAGGTGTTGA
CAGGAAGATAAAGATCTGGGACCTGAGGAAGTATGAGGTTGTGCGCTCTTACCCACAGCG
TGCTCAGTCCTTGGATTTTAGCCAGAAGGGGCTGTTGGCCTGCAGCAATGGATCTCAGGT
AGAGATATACAGGGATTTTGGTGGGCATGATTATAAGCTTTACATGAAGCACAGAATATT
GAAGGGCTATCAGGTTGGGAAGGTTTTGTTCCGCCCCTATGAAGATATTCTGGGAATTGG
GCACTCGATGGGCTTTTCTTCCATACTTGTTCCAGGTTCTGGTGAGCCGAACTTTGATAC
CTTTGTTGACAACCCCATGGAAACTACCAAGCAGAAACGTGAGAAGGAGGTACATGCTCT
CCTTGATAAACTCCCGCCGGAGACTATCATGCTCAACCCAAACATGATAGCCACTGTAAG
AGCTCCAAAGAAGAAAGAGAAGAAGACCAAGAAAGAGATTGAGGAAGAGATGGATGATGC
CATTGAAGCTGCCAAGAACATTGAGCGCAAGAAGAAGACCAAGGGTAGGAGCAAACCCAG
CAAGCGGGCCAAGAAGAAAGAGGAAGATGTTTTCAAAGCCAAGAGGCCCTTCCTGGAGCA
ATCCGAGGAGATCAATGGACGTCCTGACAAGAAGCAGCGGATAGGCGAAGAGGTCGAACT
CCCAAAAGCCTTGCAGCGGTTTGCCAAGAAACCACAGTCATGATCATAGTTAACACTGTT
GGGATTTCACATTCGTTATGCGTCGCTAGTGAGTCTTTATGATTTAACTGCCAAGTATGT
AAAATTCCCCCGTTAGGAAACGGTGCTGCATGAGCCGAAATTTTTGTTCTGAACTTTTGG
TATTCCAGTGAGCATGGCCGTGTCAGCTGATTTTTTTTTCCTTTTTTACCCTTGGTTCTC
GTAGAGTTTATTGTGGATCATCTAAAGTCTTAAAAGGCACTCTGAGTAGTGGCTACGTGC
CTTTGTGGTCAAGCACCGAAGAATCAGAACTTTGAACCAGAAGCACTGATTCGCTACTGC
CCATTACGCTTGAGCTTTGGTTTGTCTGCGGTATCCATGTGGCAAAGGCGTTGCTTGTAC
ATGGCCTTGTTTAGTTCCAAATTTTTTTTAAAATGG