Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04814
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:9708787:9714323:1 gene:SORBI_3004G103300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAACTGCTCCTCTTGCTGCGCCGCCGCCGTTCCGTCTCCTCCGGTGCTTCTCGCCAGG
CCGCGGGGGGGTTTAGCTGCTAGCTGCTCCACAAGAACAGATGAGAAGGTGCTTTTCCTA
GGCCCAAAACAGTTTCCACGGATCACATACAGCCCAGTAAGCCGTGCGTCGTCACGGTTG
TCACGGAGAGAGGTAATAGCTTTTGCCGGGCAACAACCTTGGGACCTCGGCAGATTTTTC
AAGACATTGTACTTCTTCAACGGCCCTCCAAACCCTCTCAAGATTGTAGAATCTATCATC
AGCAGTTTCACTGGACCTGCTTCTAGTGAAGCGCCAAAAAAAATGGAAACATCGGATGTG
GTGCTGGTTACAGGAGCCACTGGTGGTGTTGGGCGACGGGTGGTCGACATCCTGCGGAAG
AAGGGCATACCTGTTCGAGTATTGGCTAGAAATGGAGACAAGGCAAGGAGCATGTTGGGG
CCGGATGTAAATCTGATCATAGGAGATGTTACAAAGGAAGATACGCTTGATCCTAAGCTC
TTCAAAGGCATAAAAAAAGTAGTCAATGCAGTCTCTGTCATAGTGGGGCCAAAGGAAGGT
GATACACCAGACAGGCAGAAGTACAAACAAGGCATCAAATTTTTCGAACCTGAGATCAAG
GGACCTTCACCTGAAATGGTTGAGTACATCGGAATGCAAAACTTGATTAGTGCCATAAAG
AATAGTGTTGGACTGAGTGAAGGGAAACTGCTATTTGGGCTCAAAGGCAATTTATCTGGA
AAGATTGTGTGGGGAGCTCTTGATGACGTTGTAATGGGTGGTGTTAGTGAAAGTACATTC
CAAATCCTGCCAACAGGAAGTGAAAGTAGTGAACCAACTGGGTTGTTCAAAGGGACTGTA
TCTACTTCAAATAACGGTGGGTTTACTAGTATAAGGACAAAGAATTTTACCGTGCCAGAG
GACCTGTCAGCATATGATGGTATTGAATTACGAGTTAAAGGTGATGGACGACGGTATAAA
CTCATTATACGGACTAGCTATGAATGGGATACTGTTGGCTATACAGCAAGTTTTGACACG
ACTAAGGGGGAATGGCAAAGTGTTAAAGTACCTTTCTCTTCTCTGAAACCGGTATTCCGT
GCTCGTACTATGACTGATGCTCCACCCTTCGATGCAAGCAACATTACTTCACTACAACTT
ATGTTTAGCAAATTCGAATACGATGGAATACTCAACCCAACATTTACTGAAGGTCCATTT
GAGCTTCCTTTTTCGAGTATTAGAGCATACATAAACGAGCCGATCACTCCAAGGTTTGTT
CATGTGAGTTCTGCGGGAGTGACAAGACCTGAAAGACCAGGGCTAGATTTAAGCAAACAG
CCACCTGCTGTTCGATTGAACAAAGAGCTTGGCTCCATTTTAACTTATAAGTTGAAGGGA
GAGGATTTGATTCGGGAAAGTGGTATTCCGTACACTATTGTACGGCCATGTGCATTAACT
GAGGAACCAGCTGGAGCCGATCTCATCTTTGACCAGGGAGACAACATCACAGGAAAGATA
TCAAGGGAAGAAGTTGCCCGTATTTGTGTAGCAGCTCTGGCAAGCCCAAATGCAGTGGGC
AAAACTTTCGAGGTCAAGAGCACTGTTCCATTTAGTGAACCATATGTGATTGACCCTACA
AATCCCCCATCAGAAAAGGACTATGATGTATATTTCAAAGAACTCAAAGAAGGCATCACG
GGTAAAGAGGCATTAGAGGCAACACCTGCCCAAGTTTGA

Peptide Sequence

PEP ID

EES04814
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:9708787:9714323:1 gene:SORBI_3004G103300 transcript:EES04814 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNCSSCCAAAVPSPPVLLARPRGGLAASCSTRTDEKVLFLGPKQFPRITYSPVSRASSRL
SRREVIAFAGQQPWDLGRFFKTLYFFNGPPNPLKIVESIISSFTGPASSEAPKKMETSDV
VLVTGATGGVGRRVVDILRKKGIPVRVLARNGDKARSMLGPDVNLIIGDVTKEDTLDPKL
FKGIKKVVNAVSVIVGPKEGDTPDRQKYKQGIKFFEPEIKGPSPEMVEYIGMQNLISAIK
NSVGLSEGKLLFGLKGNLSGKIVWGALDDVVMGGVSESTFQILPTGSESSEPTGLFKGTV
STSNNGGFTSIRTKNFTVPEDLSAYDGIELRVKGDGRRYKLIIRTSYEWDTVGYTASFDT
TKGEWQSVKVPFSSLKPVFRARTMTDAPPFDASNITSLQLMFSKFEYDGILNPTFTEGPF
ELPFSSIRAYINEPITPRFVHVSSAGVTRPERPGLDLSKQPPAVRLNKELGSILTYKLKG
EDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNITGKISREEVARICVAALASPNAVG
KTFEVKSTVPFSEPYVIDPTNPPSEKDYDVYFKELKEGITGKEALEATPAQV

Transcript Sequence

Transcript ID

EES04814
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:9708787:9714323:1 gene:SORBI_3004G103300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGACCGCAGGAATTTGTGTGGTCCGCGCCTCCCTTCCACCGGCGCTCCAGCGGCATCCG
CCCCTTGTGGCTTCGTCGTCGTCGTCGCGCCGGTTCCCTCCCTCCTCATCAGTCCCGCGC
TCTCAATAATGGTAGCGTGGTGAGAGAGACCCTTCCGTCCGGCCATCGTCGTCTTCTCCA
GCGAGGGAAGAAGATGAACTGCTCCTCTTGCTGCGCCGCCGCCGTTCCGTCTCCTCCGGT
GCTTCTCGCCAGGCCGCGGGGGGGTTTAGCTGCTAGCTGCTCCACAAGAACAGATGAGAA
GGTGCTTTTCCTAGGCCCAAAACAGTTTCCACGGATCACATACAGCCCAGTAAGCCGTGC
GTCGTCACGGTTGTCACGGAGAGAGGTAATAGCTTTTGCCGGGCAACAACCTTGGGACCT
CGGCAGATTTTTCAAGACATTGTACTTCTTCAACGGCCCTCCAAACCCTCTCAAGATTGT
AGAATCTATCATCAGCAGTTTCACTGGACCTGCTTCTAGTGAAGCGCCAAAAAAAATGGA
AACATCGGATGTGGTGCTGGTTACAGGAGCCACTGGTGGTGTTGGGCGACGGGTGGTCGA
CATCCTGCGGAAGAAGGGCATACCTGTTCGAGTATTGGCTAGAAATGGAGACAAGGCAAG
GAGCATGTTGGGGCCGGATGTAAATCTGATCATAGGAGATGTTACAAAGGAAGATACGCT
TGATCCTAAGCTCTTCAAAGGCATAAAAAAAGTAGTCAATGCAGTCTCTGTCATAGTGGG
GCCAAAGGAAGGTGATACACCAGACAGGCAGAAGTACAAACAAGGCATCAAATTTTTCGA
ACCTGAGATCAAGGGACCTTCACCTGAAATGGTTGAGTACATCGGAATGCAAAACTTGAT
TAGTGCCATAAAGAATAGTGTTGGACTGAGTGAAGGGAAACTGCTATTTGGGCTCAAAGG
CAATTTATCTGGAAAGATTGTGTGGGGAGCTCTTGATGACGTTGTAATGGGTGGTGTTAG
TGAAAGTACATTCCAAATCCTGCCAACAGGAAGTGAAAGTAGTGAACCAACTGGGTTGTT
CAAAGGGACTGTATCTACTTCAAATAACGGTGGGTTTACTAGTATAAGGACAAAGAATTT
TACCGTGCCAGAGGACCTGTCAGCATATGATGGTATTGAATTACGAGTTAAAGGTGATGG
ACGACGGTATAAACTCATTATACGGACTAGCTATGAATGGGATACTGTTGGCTATACAGC
AAGTTTTGACACGACTAAGGGGGAATGGCAAAGTGTTAAAGTACCTTTCTCTTCTCTGAA
ACCGGTATTCCGTGCTCGTACTATGACTGATGCTCCACCCTTCGATGCAAGCAACATTAC
TTCACTACAACTTATGTTTAGCAAATTCGAATACGATGGAATACTCAACCCAACATTTAC
TGAAGGTCCATTTGAGCTTCCTTTTTCGAGTATTAGAGCATACATAAACGAGCCGATCAC
TCCAAGGTTTGTTCATGTGAGTTCTGCGGGAGTGACAAGACCTGAAAGACCAGGGCTAGA
TTTAAGCAAACAGCCACCTGCTGTTCGATTGAACAAAGAGCTTGGCTCCATTTTAACTTA
TAAGTTGAAGGGAGAGGATTTGATTCGGGAAAGTGGTATTCCGTACACTATTGTACGGCC
ATGTGCATTAACTGAGGAACCAGCTGGAGCCGATCTCATCTTTGACCAGGGAGACAACAT
CACAGGAAAGATATCAAGGGAAGAAGTTGCCCGTATTTGTGTAGCAGCTCTGGCAAGCCC
AAATGCAGTGGGCAAAACTTTCGAGGTCAAGAGCACTGTTCCATTTAGTGAACCATATGT
GATTGACCCTACAAATCCCCCATCAGAAAAGGACTATGATGTATATTTCAAAGAACTCAA
AGAAGGCATCACGGGTAAAGAGGCATTAGAGGCAACACCTGCCCAAGTTTGAAGATATCA
TTGAATGAAGAATTACATCTGCTTGCATAAATTCTGACACAGTAACCTCCACTCTGAATG
TCTTAAGCCATCCTGAAAGATAGACGACGCTGATGCTAAATTTTGTAGTTGAAGATCACA
GGAATAAACTAGATGATACTCCGCGTGTTGCTGCGGAAATTTGTAGTGTTGTATAATTAT
TTGACATTTGATGAAACATAAATACATAATGAATTTTATTGTGGCATGTGCAAAAGTCGG
AATTGTAAAAATCGCATGTAGTAATCAATGACAGAAGCCAGGTT