Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04778
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:8553962:8562803:1 gene:SORBI_3004G096700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCTCCCCCACTTCCTCCCTCGCCCCGCCGGTGGTGCCTATGGAGCTCCACGCC
GGCAACCGCGACCGCCTCGTTGCCGCGCTCCGCGGCCACCTCTCCGCCTCCGCCCGCCCG
CTCCACGGCCTCGTCCTCCTCCAGGGCGGGGAGGAGAAGACGCGGTACTGCACCGATCAC
CTCGAGCTCTTCAGGCAGGAGAGCTACTTCGCTTATCTCTTTGGAGTGCGTGAACCAGGG
TTCTACGGTGCAATTGACATCGCCTCTGGACAGTCAATTTTGTTTGCTCCAAGATTGCCA
GCTGACTATGCTGTTTGGATGGGTGAAATACAACCTTTGTCGTACTTCAGGGATACATAC
AAGGTCGATATGGTATTCTATGTTGATGAGATTGCACAGGTTGTGCAAGATCGTTTCGGG
GACCATGGAAAGCCTCTTCTGTTTCTGCTACATGGGAGGAATACTGACTCTGGAAATTTC
TCAAAGCCTGCTAGTTTTGAGGGGATTGAGAAGTTTGATACTGATTTAAGTACACTTCAT
CCAATTTTGACCGAATGCCGTGTGATTAAATCTGATCTGGAGCTTGCTCTCATCCAGTAT
GCTAATGATGTCAGTTCTGAAGCTCACATTGAGGTTATGAGACGAGCAAGGCCAGGCATG
AAGGAATATCAGTTAGAAAGTATCTTCCTTCACCATGTTTATATGTATGGAGGTTGCCGA
CATTGCTCTTATACATGTATATGTGCTACTGGAGATAATAGTGCTGTTCTACATTATGGA
CACGCGGCAGCGCCAAATGACCGGACTTTGAATGATGGAGACATGGCACTAATGGATATG
GGAGCTGAGTACCATTTCTATGGATCTGATATCACATGCTCATACCCTATAAATGGGAAA
TTCAACAGCAGTCAGATAATAATATACAATGCTGTGCTTAAGGCTCATAATGCTGTTATA
TCACACATGCGGCCTGGAGTTAATTGGATGGATATGCACAAATTAGCAGAACGGGCAATA
CTTGAATCTCTTAGGAAGGAACAAATTGTCCAAGGGGATGTTGATGATATGATGGTTCAA
AGGTTAGGGGCTGTTTTCATGCCTCATGGTCTTGGCCACTTACTTGGGATTGACACCCAT
GATCCAGGAGGCTACCCTGAGGGATTGGAGAGGCCCAAGGATCCAGGATTGAGCTCCTTG
CGGACCACAAGAGAACTGAAAGAAGGAATGGTTATCACAGTGGAGCCAGGCTGCTATTTC
ATTGATGCTTTGCTGAATAAAACAAGGGATGATCCAATTTCCTCAAAGTTCTTCAACTGG
CAAGAGGTTGAAAAGTATAGAAACTTTGGTGGCGTTCGCATTGAAAGTGATGTGTATGTG
ACAGCTCAAGGATGCCGGAACCTCACAAACTGCCCTCGAGAGACCTGGGAGATCGAGGCT
GTAATGGCTGGCGCAGCATGGCCTCTGCCGGCTTCAAGTTCCATGGCGGCGGCAGCAGCA
GAGAATAGAAATGGCATATCCAAAGCATTGTAA

Peptide Sequence

PEP ID

EES04778
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:8553962:8562803:1 gene:SORBI_3004G096700 transcript:EES04778 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASPTSSLAPPVVPMELHAGNRDRLVAALRGHLSASARPLHGLVLLQGGEEKTRYCTDH
LELFRQESYFAYLFGVREPGFYGAIDIASGQSILFAPRLPADYAVWMGEIQPLSYFRDTY
KVDMVFYVDEIAQVVQDRFGDHGKPLLFLLHGRNTDSGNFSKPASFEGIEKFDTDLSTLH
PILTECRVIKSDLELALIQYANDVSSEAHIEVMRRARPGMKEYQLESIFLHHVYMYGGCR
HCSYTCICATGDNSAVLHYGHAAAPNDRTLNDGDMALMDMGAEYHFYGSDITCSYPINGK
FNSSQIIIYNAVLKAHNAVISHMRPGVNWMDMHKLAERAILESLRKEQIVQGDVDDMMVQ
RLGAVFMPHGLGHLLGIDTHDPGGYPEGLERPKDPGLSSLRTTRELKEGMVITVEPGCYF
IDALLNKTRDDPISSKFFNWQEVEKYRNFGGVRIESDVYVTAQGCRNLTNCPRETWEIEA
VMAGAAWPLPASSSMAAAAAENRNGISKAL

Transcript Sequence

Transcript ID

EES04778
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:8553962:8562803:1 gene:SORBI_3004G096700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAACTCTTCTCCAATAAATTACAACCCCAGCCAAGCTTTGGAGTGCGGTTCCCAACCATG
GCGGCCTCCCCCACTTCCTCCCTCGCCCCGCCGGTGGTGCCTATGGAGCTCCACGCCGGC
AACCGCGACCGCCTCGTTGCCGCGCTCCGCGGCCACCTCTCCGCCTCCGCCCGCCCGCTC
CACGGCCTCGTCCTCCTCCAGGGCGGGGAGGAGAAGACGCGGTACTGCACCGATCACCTC
GAGCTCTTCAGGCAGGAGAGCTACTTCGCTTATCTCTTTGGAGTGCGTGAACCAGGGTTC
TACGGTGCAATTGACATCGCCTCTGGACAGTCAATTTTGTTTGCTCCAAGATTGCCAGCT
GACTATGCTGTTTGGATGGGTGAAATACAACCTTTGTCGTACTTCAGGGATACATACAAG
GTCGATATGGTATTCTATGTTGATGAGATTGCACAGGTTGTGCAAGATCGTTTCGGGGAC
CATGGAAAGCCTCTTCTGTTTCTGCTACATGGGAGGAATACTGACTCTGGAAATTTCTCA
AAGCCTGCTAGTTTTGAGGGGATTGAGAAGTTTGATACTGATTTAAGTACACTTCATCCA
ATTTTGACCGAATGCCGTGTGATTAAATCTGATCTGGAGCTTGCTCTCATCCAGTATGCT
AATGATGTCAGTTCTGAAGCTCACATTGAGGTTATGAGACGAGCAAGGCCAGGCATGAAG
GAATATCAGTTAGAAAGTATCTTCCTTCACCATGTTTATATGTATGGAGGTTGCCGACAT
TGCTCTTATACATGTATATGTGCTACTGGAGATAATAGTGCTGTTCTACATTATGGACAC
GCGGCAGCGCCAAATGACCGGACTTTGAATGATGGAGACATGGCACTAATGGATATGGGA
GCTGAGTACCATTTCTATGGATCTGATATCACATGCTCATACCCTATAAATGGGAAATTC
AACAGCAGTCAGATAATAATATACAATGCTGTGCTTAAGGCTCATAATGCTGTTATATCA
CACATGCGGCCTGGAGTTAATTGGATGGATATGCACAAATTAGCAGAACGGGCAATACTT
GAATCTCTTAGGAAGGAACAAATTGTCCAAGGGGATGTTGATGATATGATGGTTCAAAGG
TTAGGGGCTGTTTTCATGCCTCATGGTCTTGGCCACTTACTTGGGATTGACACCCATGAT
CCAGGAGGCTACCCTGAGGGATTGGAGAGGCCCAAGGATCCAGGATTGAGCTCCTTGCGG
ACCACAAGAGAACTGAAAGAAGGAATGGTTATCACAGTGGAGCCAGGCTGCTATTTCATT
GATGCTTTGCTGAATAAAACAAGGGATGATCCAATTTCCTCAAAGTTCTTCAACTGGCAA
GAGGTTGAAAAGTATAGAAACTTTGGTGGCGTTCGCATTGAAAGTGATGTGTATGTGACA
GCTCAAGGATGCCGGAACCTCACAAACTGCCCTCGAGAGACCTGGGAGATCGAGGCTGTA
ATGGCTGGCGCAGCATGGCCTCTGCCGGCTTCAAGTTCCATGGCGGCGGCAGCAGCAGAG
AATAGAAATGGCATATCCAAAGCATTGTAACTTTCTCCATGCTGAATCCATATCCTAAGT
TGAACCAAATTCGATCTAGATTCTTATATTCAATAAATAGTGAGGCCGAGGCACAAAACT
GTTGGATTGATGACCAATAACCATTAAGGCTGGAAAACATTCCGTACGCTCAGTTAATTT
GTAATCTTTCGGTTTTGTGGTTGAGATCGTTGAGAAACGTTTAGCTATTCAAATGC