Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04672
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:6006873:6013734:1 gene:SORBI_3004G073800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGCACTGGCCGCCGCATTCGCCGCCGGCCTTCTCCTTGCCCTCGCGGCGGCGCCA
GCGGGGGCCGAAACCGACTCCGCCGACGCCGCGGCGCTGGGGAATCTCTACACCTCCTGG
AACAGCCCGTCCCAGCTGGCTGGGTGGTCGGCCAGCGGCGGCGACCCCTGCGGCGCGGCG
TGGCAGGGCGTCACCTGCTCCGGCGCCGGCGTCACCGAAATCAAGCTTCCAGGGGTAGGG
CTGGATGGTTCTCTGGGATACCAACTCTCCAACCTGTTCTCTTTGAAAACACTAGATTTG
AGCAATAACAACTTGCATGGTTCAATACCTTACCAGCTGCCACCTAATCTCACTAATCTG
AATCTGGGTGGCAACAATTTCAATGGCAACCTTCCATACTCTATATCAAATATGGCTTCG
ATTCAATACCTCAATCTCAGCCACAACTCACTTTCTCAGCAACTGGGTGATCTATTTGGA
AGTCTCAATTCACTTTCAGAGTTAGATGTGTCTTTCAACAAATTGACAGGGAATCTTCCC
AATTCTATTGGTTCTTTATCAAATCTTTCAAGTCTTTATATACAAAACAATCAGTTAACG
GGTTCTGTCAATGTTCTCCGTGGGCTAAGCCTTACTACATTAAACATAGCAAACAACAAT
TTCAGTGGTTGGATACCAAAAGAATTCAGCTCCATTCCAGATCTAACACTTGACGGAAAC
TCATTTGCCAATGGACCTGCTCCTCCACCTCCACCTTTTATGCCACCGCCCCCTCAAAGG
CCACGGAATCGTCCTAAGCAACCTCAGGGGCCAGGAGATGCACCTAAAGCTTCAGAAAGC
CCCACCATTCAAAGTAACAAGAAGCAAGGCCTTGGGACAGGTCCGCTTGTGGGCATAATT
GCTGGATCGATAGTTGCTGTTTTATGTGTGTTTTTGCTTTTGGTATGCTGCATGTGCAAT
GCTCGGAAAAGAACTGATGATGCCAGCAGTGAATCAAAAGATTTTGTTGGACCTCTAACA
GTAAACATTGAGAGAGCTTCTAGCAGGGAAATCCCAGAGCAGATTGAAGATACGTCTATA
GCAACTGCGAAATTCCCACCTGAGAAAATGACTCCTGAGAGAGTTTACGGTAAAAATGGT
TCTATGAGAAAGACAAAAGTGCCCATAACCGCAACACCTTATACTGTTGCTTCTCTCCAA
GTTGCTACTAATAGTTTCTGCCAAGATTCTCTTCTGGGTGAGGGTTCACTTGGTCGTGTT
TATAAGGCTGATTTCCCAAATGGAAAGGTTCTCGCTGTTAAAAAGATAGATAGCGCCGCG
CTTTCTTTACAGGAAGAAGACAATTTCCTTGAGGCTGTATCGAGCATGTCACGGCTAAGG
CATCCAAACATCGTGCCATTGACAGGATATTGTGCTGAACATGGACAAAGGCTTCTTGTC
TATGAGTACATTGGAAATGGAACACTGCATGATATGTTGCACTTCTCTGATGAAATGAGC
AGGAAGCTTACATGGAACATCCGTGTAAGGATAGCACTAGGCACTGCTCGAGCACTTGAG
TACCTGCATGAGGTGTGCTTGCCATCTGTTGTTCATAGAAATTTTAAGTCTTCAAACATT
CTACTAGATGAGGAGCATAATCCACACCTATCTGACTGTGGACTTGCTGCCTTGACTCCA
AATACTGAAAGACAGGTTTCAACTGAAGTATTTGGATCATTTGGCTATAGTGCCCCAGAG
TTTGCCATGTCTGGCATTTATACTGTAAAGAGTGATGTGTACAGTTTTGGAGTGGTAATG
TTAGAGCTATTGACAGGGCGGAAGCCACTAGACAGTTCCAGAGAGAGGTCCGAACAGTCT
CTTGTTAGATGGGCTACCCCTCAGCTTCATGATATTGATGCACTTGCTAGGATGGTTGAT
CCAGCATTAAATGGAATGTACCCAGCTAAATCACTCTCTCGTTTTGCAGACATAATTGCA
CTCTGTGTTCAGCCTGAACCAGAGTTCCGTCCACCAATGTCAGAGGTTGTCCAGCAACTT
GTGCGCTTGATGCAGAGGGCTAGCATAGTAAGGCGGCAATCAGGAGAAGAGCTAGGGTTT
TCATACAGAGCTCCAGAACGAGAAGGAGACCTGAGAGACCTTTCCTTCTAA

Peptide Sequence

PEP ID

EES04672
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:6006873:6013734:1 gene:SORBI_3004G073800 transcript:EES04672 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEALAAAFAAGLLLALAAAPAGAETDSADAAALGNLYTSWNSPSQLAGWSASGGDPCGAA
WQGVTCSGAGVTEIKLPGVGLDGSLGYQLSNLFSLKTLDLSNNNLHGSIPYQLPPNLTNL
NLGGNNFNGNLPYSISNMASIQYLNLSHNSLSQQLGDLFGSLNSLSELDVSFNKLTGNLP
NSIGSLSNLSSLYIQNNQLTGSVNVLRGLSLTTLNIANNNFSGWIPKEFSSIPDLTLDGN
SFANGPAPPPPPFMPPPPQRPRNRPKQPQGPGDAPKASESPTIQSNKKQGLGTGPLVGII
AGSIVAVLCVFLLLVCCMCNARKRTDDASSESKDFVGPLTVNIERASSREIPEQIEDTSI
ATAKFPPEKMTPERVYGKNGSMRKTKVPITATPYTVASLQVATNSFCQDSLLGEGSLGRV
YKADFPNGKVLAVKKIDSAALSLQEEDNFLEAVSSMSRLRHPNIVPLTGYCAEHGQRLLV
YEYIGNGTLHDMLHFSDEMSRKLTWNIRVRIALGTARALEYLHEVCLPSVVHRNFKSSNI
LLDEEHNPHLSDCGLAALTPNTERQVSTEVFGSFGYSAPEFAMSGIYTVKSDVYSFGVVM
LELLTGRKPLDSSRERSEQSLVRWATPQLHDIDALARMVDPALNGMYPAKSLSRFADIIA
LCVQPEPEFRPPMSEVVQQLVRLMQRASIVRRQSGEELGFSYRAPEREGDLRDLSF

Transcript Sequence

Transcript ID

EES04672
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:6006873:6013734:1 gene:SORBI_3004G073800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGTTAATCAGATCTACTATTTTCATGCCTCCATGGCATCCAATCCAGCAATAAAAAATAG
TTTATACTTTAGGGAATGTAGCACTAGCTAGATTAGAAACATGAAACTAGTGGAAAGTTA
GAATCAAGTAAAGTAGTGTGTTTCAGGTGAGGAGGAAGATGGAACATGCAATGCAATGGT
GAAAACTTTGTCTTGCTCAGTCAAACAACAGCTCATCGTTGGTTGACTGTACTGGTACAA
ACCTTTGTCCACAGTCCACCATTAGCAAAAGCATCAATCAGCGTAGTATCTTTCTTGCTG
CTGGCCTCTGCAGGTTCTGCTCGGCCTTCATCACACTTTCACCTACTCCCATTGCTCCCC
CATTAATTTTTTACCGGATCAAAAGCAACTTCCTTCCTGTCCTGTGCATCGAGGAGGAGA
GAGAGAGAAAGAGTGTGTGAGAGAGAGCGAGAGTCAAGAACAGCAAGCAGCCCTGAACCC
AACAAACATTTAAGAGGGGGGAGCTAAAAAAAGTTGCAGTCTTTACCGGCACCATCCCTA
CAACGCCGCATCCAAGCAGCCGTGGCATCCGCCCGTTTCTTGCGTGCTTCCTTACTAGTA
GCTGTCATCCTTGGTAGTGAACCAGCGGAGAAGAGAGAGAGAGAGAGAGAGGTGAACCGG
CCGCCGTGCGGTCGACCCATGGTGATCCCCGTGCTGGACACCATGGCCGTGTCCTCCTGG
TAGGGGATAAGCGGCCGAGGAAAGCAGCAATCTTCCGCTGCGCGGAGGGAGAAGGGTCAA
GAGGGAGGGAGAGTGTGTGGGGACCAGACCAAGCATGGAGGCACTGGCCGCCGCATTCGC
CGCCGGCCTTCTCCTTGCCCTCGCGGCGGCGCCAGCGGGGGCCGAAACCGACTCCGCCGA
CGCCGCGGCGCTGGGGAATCTCTACACCTCCTGGAACAGCCCGTCCCAGCTGGCTGGGTG
GTCGGCCAGCGGCGGCGACCCCTGCGGCGCGGCGTGGCAGGGCGTCACCTGCTCCGGCGC
CGGCGTCACCGAAATCAAGCTTCCAGGGGTAGGGCTGGATGGTTCTCTGGGATACCAACT
CTCCAACCTGTTCTCTTTGAAAACACTAGATTTGAGCAATAACAACTTGCATGGTTCAAT
ACCTTACCAGCTGCCACCTAATCTCACTAATCTGAATCTGGGTGGCAACAATTTCAATGG
CAACCTTCCATACTCTATATCAAATATGGCTTCGATTCAATACCTCAATCTCAGCCACAA
CTCACTTTCTCAGCAACTGGGTGATCTATTTGGAAGTCTCAATTCACTTTCAGAGTTAGA
TGTGTCTTTCAACAAATTGACAGGGAATCTTCCCAATTCTATTGGTTCTTTATCAAATCT
TTCAAGTCTTTATATACAAAACAATCAGTTAACGGGTTCTGTCAATGTTCTCCGTGGGCT
AAGCCTTACTACATTAAACATAGCAAACAACAATTTCAGTGGTTGGATACCAAAAGAATT
CAGCTCCATTCCAGATCTAACACTTGACGGAAACTCATTTGCCAATGGACCTGCTCCTCC
ACCTCCACCTTTTATGCCACCGCCCCCTCAAAGGCCACGGAATCGTCCTAAGCAACCTCA
GGGGCCAGGAGATGCACCTAAAGCTTCAGAAAGCCCCACCATTCAAAGTAACAAGAAGCA
AGGCCTTGGGACAGGTCCGCTTGTGGGCATAATTGCTGGATCGATAGTTGCTGTTTTATG
TGTGTTTTTGCTTTTGGTATGCTGCATGTGCAATGCTCGGAAAAGAACTGATGATGCCAG
CAGTGAATCAAAAGATTTTGTTGGACCTCTAACAGTAAACATTGAGAGAGCTTCTAGCAG
GGAAATCCCAGAGCAGATTGAAGATACGTCTATAGCAACTGCGAAATTCCCACCTGAGAA
AATGACTCCTGAGAGAGTTTACGGTAAAAATGGTTCTATGAGAAAGACAAAAGTGCCCAT
AACCGCAACACCTTATACTGTTGCTTCTCTCCAAGTTGCTACTAATAGTTTCTGCCAAGA
TTCTCTTCTGGGTGAGGGTTCACTTGGTCGTGTTTATAAGGCTGATTTCCCAAATGGAAA
GGTTCTCGCTGTTAAAAAGATAGATAGCGCCGCGCTTTCTTTACAGGAAGAAGACAATTT
CCTTGAGGCTGTATCGAGCATGTCACGGCTAAGGCATCCAAACATCGTGCCATTGACAGG
ATATTGTGCTGAACATGGACAAAGGCTTCTTGTCTATGAGTACATTGGAAATGGAACACT
GCATGATATGTTGCACTTCTCTGATGAAATGAGCAGGAAGCTTACATGGAACATCCGTGT
AAGGATAGCACTAGGCACTGCTCGAGCACTTGAGTACCTGCATGAGGTGTGCTTGCCATC
TGTTGTTCATAGAAATTTTAAGTCTTCAAACATTCTACTAGATGAGGAGCATAATCCACA
CCTATCTGACTGTGGACTTGCTGCCTTGACTCCAAATACTGAAAGACAGGTTTCAACTGA
AGTATTTGGATCATTTGGCTATAGTGCCCCAGAGTTTGCCATGTCTGGCATTTATACTGT
AAAGAGTGATGTGTACAGTTTTGGAGTGGTAATGTTAGAGCTATTGACAGGGCGGAAGCC
ACTAGACAGTTCCAGAGAGAGGTCCGAACAGTCTCTTGTTAGATGGGCTACCCCTCAGCT
TCATGATATTGATGCACTTGCTAGGATGGTTGATCCAGCATTAAATGGAATGTACCCAGC
TAAATCACTCTCTCGTTTTGCAGACATAATTGCACTCTGTGTTCAGCCTGAACCAGAGTT
CCGTCCACCAATGTCAGAGGTTGTCCAGCAACTTGTGCGCTTGATGCAGAGGGCTAGCAT
AGTAAGGCGGCAATCAGGAGAAGAGCTAGGGTTTTCATACAGAGCTCCAGAACGAGAAGG
AGACCTGAGAGACCTTTCCTTCTAAGCAAGTGCTTCCATGATACAAGCGCAAAGCAGTTG
GGAGGCTCAATTTGCAAGGAAAATATCCAAAACACTCGTATAGTCATATGACTTGGAGGT
CTTGGGGAACTCGAGCTGATCGCAACAATTCAGGATCGAATGAGTTTGAGAAGATAGTTT
TGGTACCTATTGTTCAACTTTGTTCATTCTTCTACATTCGTCCCATTTTCCAGTCAGTAT
ACTTGCTGCTGTATCAAAACTGAGGGTCTGAGGCTCAAATCTTTGGTGGTGTATAGCTGA
TTATTGGTAGAAAAGAAGGAACAGAAATGTAACATGATTGATGCTCTGTTAAGTTTTAAT
GACATAAATATCTTAGACCCCACTACAGCCATTCACATATACTGGATAGATTGCTTTGGT
TTC