Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04629
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:5164446:5170078:1 gene:SORBI_3004G064000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGCTCCCCTCTCTTCCTGGCCATGGACAAGCCTCGGCGATTACAAGTACGCGCTG
CTGGGGCCTCTGGCGTGGAAGGTGGTGCAAGAATGGCGGGAGCAGGGCCAAGGGGCGCTG
CCGCTGGTGCTGGGCTCGTGGTGGCTGCACCTCCTCTTGCTGTTCGTGGTGCGGGGGCTC
ACCTACCAGTTCTGGTTCACCTACGGCAACATGCTCTTCTTCACCCGCCGCCGCCGAGTC
GTCGCCGACGGCGTCGACTTCCGGCAGATCGACGCCGAGTGGGACTGGGACAACTTTCTC
GTGCTGCAAACGCTGATTGGGGCCACGGTGGTCAACAGCCCACTGCTCCCGGGCCTGCGG
CAGCTCTGCCTGTGGGACGCCCGTGGGTGGGCCGTCGCCCTGCTGCTGCATGTGGGCTTC
TCAGAGCCGGTCTTCTACCTGGCCCACCGGGCCCTCCACCGGGACCCGCTCTTCGCCCGG
CACCACGCCGCGCACCACTCCTCGGGAGTCACCCAGTCGTTGACAGCCGGGTTCGGGACG
CCGCTGGAGGCCCTGCTGCTGACGCTGGTGATGGGGGTCCCACTGGCAGGGGCCTTCTTG
GTCGGGGCCGGGTCCATAGGCCTGGTCTACGTGCACGCCCTCGCCTTCGACTACCTGCGC
GCCATGGGGTACAGCAACGTCGAGGTCGTGTCGCCCAGGGTGTTTGAAGCGTTCCCGCTG
CTCAGATACATCCTCTACACACCTTCGTACCTGAGCCTGCACCACCGCGAGCGTCGCGGC
AACTTCTGCCTGTTCATGCCGGCGCTGGACTGGCTGGGCGGGACGCTGGACTCGCGCGCG
TGGCCGCTGCAGCGCGCCGCCTACGACGGCGCGGCGGGCGGCGGCGCGCTGGGCACGCCG
GGGTTCGTGTTCCTGGCGCACGTGGTGGACATCATGTCGTCGATGCACGTGCCGTTCACG
CTCCGGTCGCTGGGCGCCACCCCGTTCGCCAACCACTTCTACCTGCTCCCGTTCTGGCCG
CTGGCCTTCTTCTTCATGCTCCTCATGTGGTGCTGCTCCAAGACCTTCGTCGTCAGCTTC
TACTGCCTCCGCGGCCAGCTCCACCAGACCTGGTCCGTGCCTCGCTACGGCTTCCAGTAC
TTCCTGCCGGCGGCGAAGAAGGGCATCAACAAGCAGATCGAGCTGGCCATCCTTCGGGCC
GACAGGATGGGCGTCAAGGTGCTCAGCCTCGCCGCGCTAAACAAGAACGAGGCGTTGAAC
GGAGGCGGCACCCTGTTCGTGAACAAGCACCCGGACCTGCGTGTGAGGGTGGTGCACGGC
AACACGCTGACGGCGGCCGTGATCCTGAACGAGATCCCCAGCAACGTCAAGGAGGTGTTC
ATGACCGGCGCCACCTCCAAGCTCGGCAGGGCCATCGCACTCTACCTCTGCAGGAAGAAG
ATCAGAGTCCTGATGTTCACGATGTCGTCGGAGAGGTTCGTGAAGATCCAGAGGGAGGCG
CCGCCGGAGTTCCAGCAGTACCTCGTGCAGGTGACCAAATACCAGGCCGCACAGAACTGC
AAGACGTGGATCGTGGGCAAGTGGCTGTCGCCGCGCGAGCAGCGGTGGGCGCCGTCGGGG
ACGCACTTCCACCAGTTCGTGGTGCCGCCCATCATCGGCTTCCGGCGAGACTGCACCTAC
GGCAAGCTCGCCGCCATGAGGCTCCCCAAGGACGTGCAGGGCCTGGGCTCCTGCGAGTAC
ACGATGGAGCGCGGGGTGGTGCACGCGTGCCACGCCGGCGGCGTCGTGCACTTCCTCGAA
GGATGGGACCACCACGAGGTGGGCGCCATCGACGTCGACCGGATCGACGTCGTCTGGAAC
GCCGCGCTCAAGCACGGCCTCGCGCCGGTGTGA

Peptide Sequence

PEP ID

EES04629
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:5164446:5170078:1 gene:SORBI_3004G064000 transcript:EES04629 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAPLSSWPWTSLGDYKYALLGPLAWKVVQEWREQGQGALPLVLGSWWLHLLLLFVVRGL
TYQFWFTYGNMLFFTRRRRVVADGVDFRQIDAEWDWDNFLVLQTLIGATVVNSPLLPGLR
QLCLWDARGWAVALLLHVGFSEPVFYLAHRALHRDPLFARHHAAHHSSGVTQSLTAGFGT
PLEALLLTLVMGVPLAGAFLVGAGSIGLVYVHALAFDYLRAMGYSNVEVVSPRVFEAFPL
LRYILYTPSYLSLHHRERRGNFCLFMPALDWLGGTLDSRAWPLQRAAYDGAAGGGALGTP
GFVFLAHVVDIMSSMHVPFTLRSLGATPFANHFYLLPFWPLAFFFMLLMWCCSKTFVVSF
YCLRGQLHQTWSVPRYGFQYFLPAAKKGINKQIELAILRADRMGVKVLSLAALNKNEALN
GGGTLFVNKHPDLRVRVVHGNTLTAAVILNEIPSNVKEVFMTGATSKLGRAIALYLCRKK
IRVLMFTMSSERFVKIQREAPPEFQQYLVQVTKYQAAQNCKTWIVGKWLSPREQRWAPSG
THFHQFVVPPIIGFRRDCTYGKLAAMRLPKDVQGLGSCEYTMERGVVHACHAGGVVHFLE
GWDHHEVGAIDVDRIDVVWNAALKHGLAPV

Transcript Sequence

Transcript ID

EES04629
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:5164446:5170078:1 gene:SORBI_3004G064000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAGGAGTACACACGATCTGTTTCTCTCTCCCGGGGCTGGCCTCCTCCAGTACTTTAGACA
CTGCACCGTGTTGCCCTCTTTCGTCTCTAAAGACCTCCAGAACCAGAATCCATGGCTGCT
CCCCTCTCTTCCTGGCCATGGACAAGCCTCGGCGATTACAAGTACGCGCTGCTGGGGCCT
CTGGCGTGGAAGGTGGTGCAAGAATGGCGGGAGCAGGGCCAAGGGGCGCTGCCGCTGGTG
CTGGGCTCGTGGTGGCTGCACCTCCTCTTGCTGTTCGTGGTGCGGGGGCTCACCTACCAG
TTCTGGTTCACCTACGGCAACATGCTCTTCTTCACCCGCCGCCGCCGAGTCGTCGCCGAC
GGCGTCGACTTCCGGCAGATCGACGCCGAGTGGGACTGGGACAACTTTCTCGTGCTGCAA
ACGCTGATTGGGGCCACGGTGGTCAACAGCCCACTGCTCCCGGGCCTGCGGCAGCTCTGC
CTGTGGGACGCCCGTGGGTGGGCCGTCGCCCTGCTGCTGCATGTGGGCTTCTCAGAGCCG
GTCTTCTACCTGGCCCACCGGGCCCTCCACCGGGACCCGCTCTTCGCCCGGCACCACGCC
GCGCACCACTCCTCGGGAGTCACCCAGTCGTTGACAGCCGGGTTCGGGACGCCGCTGGAG
GCCCTGCTGCTGACGCTGGTGATGGGGGTCCCACTGGCAGGGGCCTTCTTGGTCGGGGCC
GGGTCCATAGGCCTGGTCTACGTGCACGCCCTCGCCTTCGACTACCTGCGCGCCATGGGG
TACAGCAACGTCGAGGTCGTGTCGCCCAGGGTGTTTGAAGCGTTCCCGCTGCTCAGATAC
ATCCTCTACACACCTTCGTACCTGAGCCTGCACCACCGCGAGCGTCGCGGCAACTTCTGC
CTGTTCATGCCGGCGCTGGACTGGCTGGGCGGGACGCTGGACTCGCGCGCGTGGCCGCTG
CAGCGCGCCGCCTACGACGGCGCGGCGGGCGGCGGCGCGCTGGGCACGCCGGGGTTCGTG
TTCCTGGCGCACGTGGTGGACATCATGTCGTCGATGCACGTGCCGTTCACGCTCCGGTCG
CTGGGCGCCACCCCGTTCGCCAACCACTTCTACCTGCTCCCGTTCTGGCCGCTGGCCTTC
TTCTTCATGCTCCTCATGTGGTGCTGCTCCAAGACCTTCGTCGTCAGCTTCTACTGCCTC
CGCGGCCAGCTCCACCAGACCTGGTCCGTGCCTCGCTACGGCTTCCAGTACTTCCTGCCG
GCGGCGAAGAAGGGCATCAACAAGCAGATCGAGCTGGCCATCCTTCGGGCCGACAGGATG
GGCGTCAAGGTGCTCAGCCTCGCCGCGCTAAACAAGAACGAGGCGTTGAACGGAGGCGGC
ACCCTGTTCGTGAACAAGCACCCGGACCTGCGTGTGAGGGTGGTGCACGGCAACACGCTG
ACGGCGGCCGTGATCCTGAACGAGATCCCCAGCAACGTCAAGGAGGTGTTCATGACCGGC
GCCACCTCCAAGCTCGGCAGGGCCATCGCACTCTACCTCTGCAGGAAGAAGATCAGAGTC
CTGATGTTCACGATGTCGTCGGAGAGGTTCGTGAAGATCCAGAGGGAGGCGCCGCCGGAG
TTCCAGCAGTACCTCGTGCAGGTGACCAAATACCAGGCCGCACAGAACTGCAAGACGTGG
ATCGTGGGCAAGTGGCTGTCGCCGCGCGAGCAGCGGTGGGCGCCGTCGGGGACGCACTTC
CACCAGTTCGTGGTGCCGCCCATCATCGGCTTCCGGCGAGACTGCACCTACGGCAAGCTC
GCCGCCATGAGGCTCCCCAAGGACGTGCAGGGCCTGGGCTCCTGCGAGTACACGATGGAG
CGCGGGGTGGTGCACGCGTGCCACGCCGGCGGCGTCGTGCACTTCCTCGAAGGATGGGAC
CACCACGAGGTGGGCGCCATCGACGTCGACCGGATCGACGTCGTCTGGAACGCCGCGCTC
AAGCACGGCCTCGCGCCGGTGTGATATATCGGACTGGTCGTCGTCTCGTCCAGCCGGCGC
CGCCCGCGCGCGCGTTTCATGGCACAGCAGCTATTAGGCCAACAGACAGCCCCACGGGCT
ACCGTGGCTATTCTTGTAGTAGTACTTACTACTGTCCAATGGGAATTGGGACGACGACGG
CACAAAATGTACACGCGCGTGCATCGACGATCTCTGACGGCAGGATCGACGGGTTATTAT
TTATATAAAAAGTTACTGTAGCAAATGGGTTAATTAGTTCTCGACGATGGCCTCTTTTTT
CTTGTCAAATTAAACAATGATGTAAATGTCACTCAGAATAAGGAATCGGATGGCCGACGC
GATTGTCACGGGATCAATCG