Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04548
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:3873653:3878854:1 gene:SORBI_3004G047800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGAGCTGCGGCACTCGGCGGCGGCGCGTGCGTCCAACTCCCCCGCCAAGCGCGAC
TCCGACGCCTCCGCCGCGTCGTCCCCCTTCCTCCCCTCCCCCTCCACCCGCGGCAGCCGC
GGCGGCGACGACGACGACGACGGCAAGGACGTCCACCGCTCGTCCCCTCTCCTGTCGCAC
CACCACCACAAGCGCGCCCACCTGCTGACGTCCCCGTTCCGCTCCCTCCTCGCACTGGAG
GACCCCAGGTCCCCCGCCGCCTCGTCCTCCTACCGGATCCTGCTTGCCCTCCTCGCGCTC
CTCCTCGCCGCTGGGATCTTCTGCGCGCCCTTGCTCTGGTCCCGCCTTAACACGCCGTAC
TTGTGCCACAAGGAGGGGATCACGCTCCACTGCCCTGAGACGAAGGAACCCCCATCTCTA
TGGGAGAATCCACGTGCTGCCACTACATCTTGGAAGCCCTGTGCAGAGCGACGCAGCAAT
GAGCCCTCAGATGTCCCATCAGTAAATGAAACCTCTGGGTATATTTTTATCCATGCTGAG
GGAGGACTAAACCAGCAACGCATAGCTATATGTAATGCTGTTGCAATTGCCAAAATAATG
AGAGCAACGCTTATTTTGCCTGTTCTGAAGCAGGACCAAATTTGGAAAGACCAGACGAAA
TTTGAAGATATCTTTGATGTTGATCATTTTATAAATTATTTGAAGGATGATGTACGGATT
GTCCGAGATATCCCTGACTGGTTCACAGAGAAGGATGAGCTGTTTACCAGTATAAAGCGT
ACTGTGAAGAACATCCCAAAGTATGCTTCAGCACAGTTTTATATTGACAATGTACTTCCA
AGGATCAAAGAGAAAAAGATAATGTCTATCAAGCCATTTGTCGACAGGTTGGGATATGAT
AATGTACCAATGGAGATTAACCGGCTAAGATGCAGAGTAAACTATCACGCATTAAAGTTC
CTACCTGATATTGAGGAAATGGCCGATAAGCTTGCAGCAAGAATGAGGAACAGAACTGGC
AACATAAATCCATACATGGCTCTTCACCTGAGATTTGAAAAAGGAATGGTGGGGCTTTCT
TTCTGTGATTTTGCTGGCACACGGGAGGAGAAGGCGATGATGGCCGCTTACAGGCAGAAA
GAATGGCCAAGGCGCTACAAGAATGGATCCCATCTGTGGCCACTGGCACTGCAGAAGAGA
AAAGAAGGCCGTTGCCCTCTTGAGCCCGGTGAGATTGCTGTGATCCTGCGCGCACTGGGG
TACACGAGCGGAACACAAATATACGTCGCCTCAGGGCAAGTGTACGGCGGCAAGAACCGG
ATGGCTCCCCTCAGGAACATGTTCCCCAACTTGGTGACGAAGGAGGAGCTGGCGAGCGCG
GAGGAGCTGGCGCCATTCCGGCGGCACGTGACGAGCCTGGCGGCGCTGGACTTCCTGGTG
TGCCTGCGGTCGGACGTGTTCGTGATGACGCACGGCGGCAACTTCGCCAAGCTCATCATC
GGGGCGCGACGCTACGCGGGGCACCGCCTCAAGTCGGTGAAGCCCGACAAGGGCCTCATG
TCCAAGTCCCTGGGCGACCCCGACATGGGCTGGGCCTCCTTCGCGGAGGACGTCGTCGTC
ACGCACCGCACGCGGACGGGCCTCCCCGAGCCCACCTTCCCCAGCTACGATCTCTGGGAG
AACCCGCTCACGCCCTGCATGTGCAGGGCCTGA

Peptide Sequence

PEP ID

EES04548
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:3873653:3878854:1 gene:SORBI_3004G047800 transcript:EES04548 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAELRHSAAARASNSPAKRDSDASAASSPFLPSPSTRGSRGGDDDDDGKDVHRSSPLLSH
HHHKRAHLLTSPFRSLLALEDPRSPAASSSYRILLALLALLLAAGIFCAPLLWSRLNTPY
LCHKEGITLHCPETKEPPSLWENPRAATTSWKPCAERRSNEPSDVPSVNETSGYIFIHAE
GGLNQQRIAICNAVAIAKIMRATLILPVLKQDQIWKDQTKFEDIFDVDHFINYLKDDVRI
VRDIPDWFTEKDELFTSIKRTVKNIPKYASAQFYIDNVLPRIKEKKIMSIKPFVDRLGYD
NVPMEINRLRCRVNYHALKFLPDIEEMADKLAARMRNRTGNINPYMALHLRFEKGMVGLS
FCDFAGTREEKAMMAAYRQKEWPRRYKNGSHLWPLALQKRKEGRCPLEPGEIAVILRALG
YTSGTQIYVASGQVYGGKNRMAPLRNMFPNLVTKEELASAEELAPFRRHVTSLAALDFLV
CLRSDVFVMTHGGNFAKLIIGARRYAGHRLKSVKPDKGLMSKSLGDPDMGWASFAEDVVV
THRTRTGLPEPTFPSYDLWENPLTPCMCRA

Transcript Sequence

Transcript ID

EES04548
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:3873653:3878854:1 gene:SORBI_3004G047800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCACGGCCGCGAGCGGCGAGAGCGACAGTGCGAACAGGCTCGTCAGCCAACAGGAATCA
AGTGCACATTCCCACTCCCGCGCGCCGCGGCCGGTGGCGGCGGCCATGGCTGAGCTGCGG
CACTCGGCGGCGGCGCGTGCGTCCAACTCCCCCGCCAAGCGCGACTCCGACGCCTCCGCC
GCGTCGTCCCCCTTCCTCCCCTCCCCCTCCACCCGCGGCAGCCGCGGCGGCGACGACGAC
GACGACGGCAAGGACGTCCACCGCTCGTCCCCTCTCCTGTCGCACCACCACCACAAGCGC
GCCCACCTGCTGACGTCCCCGTTCCGCTCCCTCCTCGCACTGGAGGACCCCAGGTCCCCC
GCCGCCTCGTCCTCCTACCGGATCCTGCTTGCCCTCCTCGCGCTCCTCCTCGCCGCTGGG
ATCTTCTGCGCGCCCTTGCTCTGGTCCCGCCTTAACACGCCGTACTTGTGCCACAAGGAG
GGGATCACGCTCCACTGCCCTGAGACGAAGGAACCCCCATCTCTATGGGAGAATCCACGT
GCTGCCACTACATCTTGGAAGCCCTGTGCAGAGCGACGCAGCAATGAGCCCTCAGATGTC
CCATCAGTAAATGAAACCTCTGGGTATATTTTTATCCATGCTGAGGGAGGACTAAACCAG
CAACGCATAGCTATATGTAATGCTGTTGCAATTGCCAAAATAATGAGAGCAACGCTTATT
TTGCCTGTTCTGAAGCAGGACCAAATTTGGAAAGACCAGACGAAATTTGAAGATATCTTT
GATGTTGATCATTTTATAAATTATTTGAAGGATGATGTACGGATTGTCCGAGATATCCCT
GACTGGTTCACAGAGAAGGATGAGCTGTTTACCAGTATAAAGCGTACTGTGAAGAACATC
CCAAAGTATGCTTCAGCACAGTTTTATATTGACAATGTACTTCCAAGGATCAAAGAGAAA
AAGATAATGTCTATCAAGCCATTTGTCGACAGGTTGGGATATGATAATGTACCAATGGAG
ATTAACCGGCTAAGATGCAGAGTAAACTATCACGCATTAAAGTTCCTACCTGATATTGAG
GAAATGGCCGATAAGCTTGCAGCAAGAATGAGGAACAGAACTGGCAACATAAATCCATAC
ATGGCTCTTCACCTGAGATTTGAAAAAGGAATGGTGGGGCTTTCTTTCTGTGATTTTGCT
GGCACACGGGAGGAGAAGGCGATGATGGCCGCTTACAGGCAGAAAGAATGGCCAAGGCGC
TACAAGAATGGATCCCATCTGTGGCCACTGGCACTGCAGAAGAGAAAAGAAGGCCGTTGC
CCTCTTGAGCCCGGTGAGATTGCTGTGATCCTGCGCGCACTGGGGTACACGAGCGGAACA
CAAATATACGTCGCCTCAGGGCAAGTGTACGGCGGCAAGAACCGGATGGCTCCCCTCAGG
AACATGTTCCCCAACTTGGTGACGAAGGAGGAGCTGGCGAGCGCGGAGGAGCTGGCGCCA
TTCCGGCGGCACGTGACGAGCCTGGCGGCGCTGGACTTCCTGGTGTGCCTGCGGTCGGAC
GTGTTCGTGATGACGCACGGCGGCAACTTCGCCAAGCTCATCATCGGGGCGCGACGCTAC
GCGGGGCACCGCCTCAAGTCGGTGAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTGGGC
GACCCCGACATGGGCTGGGCCTCCTTCGCGGAGGACGTCGTCGTCACGCACCGCACGCGG
ACGGGCCTCCCCGAGCCCACCTTCCCCAGCTACGATCTCTGGGAGAACCCGCTCACGCCC
TGCATGTGCAGGGCCTGAGAGGTTGGCCCTCCTGCTGTGCTGAGTCCTCCGTCTTCTCGA
GCCTTCTTCCCCTAGGTAGTAGTCCGTAGCCACTCCCATCAGCATTTCAGCAAGTACTAT
ATGCTTCCATTTGTTAAGCACCTACGATTTTCTATGTATTTTGCTGGCCTAATCTGTAGT
TTCACATAGTAGATCAGTTCTTGCTGAAAATGTCTTGGACAAAGCAGTGAATGAAGATAA
TATCAGTAACCTGCTTTCCCAAAACACCTTTGGGATTTACCAAATTAAGATCCTATTTGG
TTTCCAAAAATTTATAAGATTCTTCGATTTTTATAGAGTATTAAATATAAATTTAAAAAA
TTAACTAATTACGTAATTTATATGTAGTTTATGAATCTGATTATTTTATAATTAGACAGT
AATTACTAAATAATGAAACTACTACTG