Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04545
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:3839237:3844566:1 gene:SORBI_3004G047200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCGATGATGCAACCGCAGATCATCCTGCTCAAGGAGGGCACGGACACGTCGCAG
GGGCGCGCGCAGGTGGTGAGCAACATCAACGCGTGCACGGCGGTGGGCGACACCGTGCGG
ACCACGCTGGGGCCCCGGGGGATGGACAAGCTCATCCACGACGACAAGGGCGGAGTCACC
ATCTCCAACGACGGCGCAACCATCATGCGCCTCCTCGACATCGTGCACCCCGCCGCCAAG
ATCCTTGTCGACATCGCCAAGTCACAGGACTCCGAGGTTGGTGATGGGACAACTACTGTG
GTGCTTCTAGCTGCAGAATTCTTAAAGGAAGCAAAACCTTATATTGAGGATGGGGTGCAC
CCCCACAGTCTAATTCGCAGCTATAGAACTGCAGGCAATATGGCAATCCAAAGGGTTAAA
GAGCTAGCAGTTAGCATAGAAGGAAAAAGCCTTGAAGAGAAGAAAACATTGCTAGCCAAG
TGTGCTGCTACAACACTCTCTTCAAAACTTATAGGCGGTGAAAAAGAATTCTTTGCTTCT
ATGGTTGTGGATGCTGTCCTTGCCATTGGCAATGATGACAGGCTTAATCTTATCGGGATT
AAGAAGGTTCCTGGAGGTACCATGAGAGATTCTTTTCTGGTGAATGGTGTTGCGTTCAAG
AAGACATTTTCGTATGCTGGATTTGAGCAACAACCAAAGAAGTTCCTGAACCCGAAGATT
CTTTTGTTAAACATTGAACTAGAATTGAAATCTGAGAAGGAAAATGCAGAGATCAGGTTA
TCTGACCCTCTGCAATACCAATCAATTGTTGATGCTGAATGGAACATTATTTATGATAAA
CTGGATAAATGTGTGAAAAGTGGAGCAAAGATAGTTCTGTCTCGGCTAGCTATTGGTGAT
CTTGCAACACAGTATTTCGCAGATCGAGACATTTTCTGCGCCGGCCGTGTCACTGAAGAA
GATTTGCAACGTGTTGCTGCAGCAACTGGTGGAACTGTTCAAACTTCTGTAAATAATGTC
ATCGATGAGGTACTTGGTTCCTGTGAGGTATTCGAGGAAAAGCAAGTAGGTAATGAAAGG
TTCAACATATTTAGTGGCTGCCCTTCTGGTCAGACAGCAACTATTGTGCTCCGTGGTGGT
GCAGACCAGTTCATTGAGGAAGCTGAACGGAGTCTCCATGATGCCATCATGATTGTGAGG
AGAGCACTTAAGAACTCAACAGTTGTGCCGGGTGGCGGTGCTATTGATATGGAAATAAGC
AAGTATCTCAGGCAGCATGCACGGACAATTGCTGGGAAGTCTCAGTTCTTTGTAAATTCG
TTTGCTAAAGCCCTCGAGGTCATTCCTCGTCAACTTTGTGATAATGCTGGATTTGATGCT
ACTGACGTTCTCAATAAGCTCAGGCAGAAACATGCATCTGGTGAAGGTGCTAATTATGGT
GTAGACATCAACACTGGCGGAATTGCTGATTCCTTTGCTAACTTTGTGTGGGAACCTGCT
GTTGTAAAGATCAATGCTATAAATGCTGCAACTGAAGCATCCTGCCTTATTCTTAGCGTT
GACGAAACAGTGAAAAACCCAAAGTCCGAAAGCGCACAAGGTGAGGCAGCAGCTGGCGCA
ATGGCTGGTCGTGGTGGTGGGGCAATGCGTGGACGTGGTGGCAGGGGCATGCGCAGGCGA
TGA

Peptide Sequence

PEP ID

EES04545
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:3839237:3844566:1 gene:SORBI_3004G047200 transcript:EES04545 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASMMQPQIILLKEGTDTSQGRAQVVSNINACTAVGDTVRTTLGPRGMDKLIHDDKGGVT
ISNDGATIMRLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVH
PHSLIRSYRTAGNMAIQRVKELAVSIEGKSLEEKKTLLAKCAATTLSSKLIGGEKEFFAS
MVVDAVLAIGNDDRLNLIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKI
LLLNIELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGD
LATQYFADRDIFCAGRVTEEDLQRVAAATGGTVQTSVNNVIDEVLGSCEVFEEKQVGNER
FNIFSGCPSGQTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVPGGGAIDMEIS
KYLRQHARTIAGKSQFFVNSFAKALEVIPRQLCDNAGFDATDVLNKLRQKHASGEGANYG
VDINTGGIADSFANFVWEPAVVKINAINAATEASCLILSVDETVKNPKSESAQGEAAAGA
MAGRGGGAMRGRGGRGMRRR

Transcript Sequence

Transcript ID

EES04545
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:3839237:3844566:1 gene:SORBI_3004G047200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAAAAATTTCTCAAACGAAATGAGAGGAAATGACATGGGCCTGAATATCTGGCCCAGATG
GGCCGACGGACCATGGATCATTCAGGTATGGGCCCACCGGGCCGGCACCAGTCAGACTCC
AGTCTACCAGCTACCAGGGTGTTGTGGGCTTGTGGCGCAGCGGCAGATGGACGCCAGGAT
TTCTCCATTAAAAAACCTCGGCCGAAACCTCAAAACCCTACTCCCGTCTGCTCTCAGATC
TCTTCCGCTCCCTCCTCACACTTGAAGCCCTAGCTCCGCGCAGCCCCCAACCATGGCGTC
GATGATGCAACCGCAGATCATCCTGCTCAAGGAGGGCACGGACACGTCGCAGGGGCGCGC
GCAGGTGGTGAGCAACATCAACGCGTGCACGGCGGTGGGCGACACCGTGCGGACCACGCT
GGGGCCCCGGGGGATGGACAAGCTCATCCACGACGACAAGGGCGGAGTCACCATCTCCAA
CGACGGCGCAACCATCATGCGCCTCCTCGACATCGTGCACCCCGCCGCCAAGATCCTTGT
CGACATCGCCAAGTCACAGGACTCCGAGGTTGGTGATGGGACAACTACTGTGGTGCTTCT
AGCTGCAGAATTCTTAAAGGAAGCAAAACCTTATATTGAGGATGGGGTGCACCCCCACAG
TCTAATTCGCAGCTATAGAACTGCAGGCAATATGGCAATCCAAAGGGTTAAAGAGCTAGC
AGTTAGCATAGAAGGAAAAAGCCTTGAAGAGAAGAAAACATTGCTAGCCAAGTGTGCTGC
TACAACACTCTCTTCAAAACTTATAGGCGGTGAAAAAGAATTCTTTGCTTCTATGGTTGT
GGATGCTGTCCTTGCCATTGGCAATGATGACAGGCTTAATCTTATCGGGATTAAGAAGGT
TCCTGGAGGTACCATGAGAGATTCTTTTCTGGTGAATGGTGTTGCGTTCAAGAAGACATT
TTCGTATGCTGGATTTGAGCAACAACCAAAGAAGTTCCTGAACCCGAAGATTCTTTTGTT
AAACATTGAACTAGAATTGAAATCTGAGAAGGAAAATGCAGAGATCAGGTTATCTGACCC
TCTGCAATACCAATCAATTGTTGATGCTGAATGGAACATTATTTATGATAAACTGGATAA
ATGTGTGAAAAGTGGAGCAAAGATAGTTCTGTCTCGGCTAGCTATTGGTGATCTTGCAAC
ACAGTATTTCGCAGATCGAGACATTTTCTGCGCCGGCCGTGTCACTGAAGAAGATTTGCA
ACGTGTTGCTGCAGCAACTGGTGGAACTGTTCAAACTTCTGTAAATAATGTCATCGATGA
GGTACTTGGTTCCTGTGAGGTATTCGAGGAAAAGCAAGTAGGTAATGAAAGGTTCAACAT
ATTTAGTGGCTGCCCTTCTGGTCAGACAGCAACTATTGTGCTCCGTGGTGGTGCAGACCA
GTTCATTGAGGAAGCTGAACGGAGTCTCCATGATGCCATCATGATTGTGAGGAGAGCACT
TAAGAACTCAACAGTTGTGCCGGGTGGCGGTGCTATTGATATGGAAATAAGCAAGTATCT
CAGGCAGCATGCACGGACAATTGCTGGGAAGTCTCAGTTCTTTGTAAATTCGTTTGCTAA
AGCCCTCGAGGTCATTCCTCGTCAACTTTGTGATAATGCTGGATTTGATGCTACTGACGT
TCTCAATAAGCTCAGGCAGAAACATGCATCTGGTGAAGGTGCTAATTATGGTGTAGACAT
CAACACTGGCGGAATTGCTGATTCCTTTGCTAACTTTGTGTGGGAACCTGCTGTTGTAAA
GATCAATGCTATAAATGCTGCAACTGAAGCATCCTGCCTTATTCTTAGCGTTGACGAAAC
AGTGAAAAACCCAAAGTCCGAAAGCGCACAAGGTGAGGCAGCAGCTGGCGCAATGGCTGG
TCGTGGTGGTGGGGCAATGCGTGGACGTGGTGGCAGGGGCATGCGCAGGCGATGAACTGA
GCCACGTTGATCCTGTAACATTATGTTTTGATCGCCTTTGTTGGTCAGATTTTTTTGCCT
GTTTGGGCTTGCGCGGTGCTGTTGTGTCGTACTGCACATGTAATGTGAGTTTATGGACAC
GCACTTATTATTGTGTGCTTTTGGTTGGGAAGCAGTAGCAGCCTTTTTGTTTCAGAGGAG
ATGCGCTAGGCGTTTATCATTGTAGCTTTCCTGTTGTGATATAGTAGTAGACCTGAGCCT
TTGGTTACAATTTGTTTGGCCCATGTCTCAGTTTATTGGCTTCGTTTTTTCATCGTGAGA
ATGAATGATCGTTTGTG