Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04440
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:2138279:2142736:1 gene:SORBI_3004G026700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGAGCAATGACCCTAGCACACCCTCCAAGGCTTCAAAGGCATCAGAACAAGATCAA
CCTCCAGCTACCACATCCAGTGGAACACCTTCAGTGTACCCTGAATGGCCCAGCTTTCAG
GCCTACTCAGCAATTCCACCACATGGGTTCTTCCCCCCTACCGTTGCTGCAAATCCACAG
GCCCATCCATACATGTGGGGAGCTCAGCCCATGGTACCACCTTATGGGACGCCACCACCA
CCTTATGTGATGTATCCACCTGGAACAGTATATGCCCATCCCTCTACACCTCCTACTATG
CATCCATTTAGTCATTATCCTATGCCAACAAACGGACATGCTGAAACCCCTGGAGCTGCA
CCAAGTGCTCCAGAAATGAATGGGAAAAGTGAGCCTGGCAGAACATCTGCTCCATCTGCC
AATGGGATTACCTCCCACAGTGAGAGTGGAAGTGAGAGTGAGAGTGAAGGAAGTGATGCC
AATTCTCAAAATGATTCACACTCAAAGGACAATGATGGAAAGGAAGATGGCAATTCTCAG
AATGGCATATCTTATTCAGCATCACAAGGAATGTTAAACCAAACCATGGCGATGCTTCCA
GTACAACCGGGTGCAATGGTTGGAGGAGTTCCTAGCTCCACAGCTAACTTGAATATTGGA
ATGGATTATTGGGCAGCTTCAGGTTCTGCAGCTGTCCCTGGAACGCATGGCAAAGCACCA
GTTGGTTCAGCTCGGGGAGACCAATGGGATGAAAGGGAACTCAAGAAGCAAAAACGAAAG
CAGTCTAATAGAGAATCAGCACGCAGATCCCGGCTGCGCAAACAGGCTGAGTGCGAGGAG
CTTGGGCAACGTGCTGAAGCTTTGAGGTCGGAGAACTCCTCTCTCAGGGCCGAGCTTGAG
CGGATCAGAAAGGAGTATGAACAGCTACTTTCACAGAATGCTTCCCTCAAGGAAAAGCTG
GGGGCCACCAGTGATTCTATTCCTGATATGAATGAAAAGAACGACGGCGACGGCAGCTAC
AAGAGACAACATGATTCCGATGCCCAGTCTTGA

Peptide Sequence

PEP ID

EES04440
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:2138279:2142736:1 gene:SORBI_3004G026700 transcript:EES04440 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGSNDPSTPSKASKASEQDQPPATTSSGTPSVYPEWPSFQAYSAIPPHGFFPPTVAANPQ
AHPYMWGAQPMVPPYGTPPPPYVMYPPGTVYAHPSTPPTMHPFSHYPMPTNGHAETPGAA
PSAPEMNGKSEPGRTSAPSANGITSHSESGSESESEGSDANSQNDSHSKDNDGKEDGNSQ
NGISYSASQGMLNQTMAMLPVQPGAMVGGVPSSTANLNIGMDYWAASGSAAVPGTHGKAP
VGSARGDQWDERELKKQKRKQSNRESARRSRLRKQAECEELGQRAEALRSENSSLRAELE
RIRKEYEQLLSQNASLKEKLGATSDSIPDMNEKNDGDGSYKRQHDSDAQS

Transcript Sequence

Transcript ID

EES04440
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:2138279:2142736:1 gene:SORBI_3004G026700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCGCTCGCCCCAGGTGGGCCAGGCCTATCTATCCATCCACCTATACCAATCATAGATGAT
CGCGGGCGCAGCAGCTCGAGCTTCTGGCTGGCTGGCTGGCTCACGAAAGGCCCATGCCCC
AATCATCGTCGCCGGCTCCCTTCGTGGGCCCCACGCCCGCTTCGGTTGTAGGCGACGGCC
CATACGGTCCACCGAGGACCCGGTCCACGCCACGCCATCTCCTTCCTCCTCGTCTGACCT
CTCGACTCTCGTCGTCGACGAAGGAAGGATTTCCGCCTCCGCCTCCGCCTCCGCCCCGGC
CGCCTTTTCGCGCTGGCCCGCCGCTGCATTTCCCGGTGGCCTCGCCGCGTGCGGCCGCGA
GACGTGGGGGCCTGCTGCGGTCCTCGCCCGCGTCGTCTCCCCGTGGGGGGCGTGCCTGCC
TGGGACCGTTGAGACGAGTACGTGCGCTGTGACCCCCGCTCTGCTGGATTACCTCACGCT
TTCCCTGCATTCCCATCTACGCGTTTATGGTACCAACACCTGTTCATTGCGAATTTGGTG
TTGCGGTTTCCTGCTGTACATTTTTTTTTTGTTTTATTTGGACAGGGCTTTGCCGAACAA
TTTAATACCACTGCTACATTAGTGCTTGATTTTTGTGAGACATAGATTCGTATTGAAGCA
TGCCTGCTTATAATTATGATTTCATATCACATAATGACATAATAATGGAGTAATTGTTGG
ATAAAGACGTTAATTCCTCTAGAATCCACACGAGTCATTATTTGTTGGAATACACCTTTG
AGGTTTCAAACGAAGCTAGAGTATCATTTTCATGTTACTACATGTTTCTTTAAATAAAAA
ATCTTGCATCTCAATGTTTTTTTTTTCTCTTGGGTTCAACAGGAAGCCTTGCACCTGTTC
TGTTCAAGACGTCAGGTGTTGGTATTTGAGTGGCAATTGAGTGGTTGGGGAACCTGATTG
GCCACAAGCATTGTTGGTCCACCGATGGGGAGCAATGACCCTAGCACACCCTCCAAGGCT
TCAAAGGCATCAGAACAAGATCAACCTCCAGCTACCACATCCAGTGGAACACCTTCAGTG
TACCCTGAATGGCCCAGCTTTCAGGCCTACTCAGCAATTCCACCACATGGGTTCTTCCCC
CCTACCGTTGCTGCAAATCCACAGGCCCATCCATACATGTGGGGAGCTCAGCCCATGGTA
CCACCTTATGGGACGCCACCACCACCTTATGTGATGTATCCACCTGGAACAGTATATGCC
CATCCCTCTACACCTCCTACTATGCATCCATTTAGTCATTATCCTATGCCAACAAACGGA
CATGCTGAAACCCCTGGAGCTGCACCAAGTGCTCCAGAAATGAATGGGAAAAGTGAGCCT
GGCAGAACATCTGCTCCATCTGCCAATGGGATTACCTCCCACAGTGAGAGTGGAAGTGAG
AGTGAGAGTGAAGGAAGTGATGCCAATTCTCAAAATGATTCACACTCAAAGGACAATGAT
GGAAAGGAAGATGGCAATTCTCAGAATGGCATATCTTATTCAGCATCACAAGGAATGTTA
AACCAAACCATGGCGATGCTTCCAGTACAACCGGGTGCAATGGTTGGAGGAGTTCCTAGC
TCCACAGCTAACTTGAATATTGGAATGGATTATTGGGCAGCTTCAGGTTCTGCAGCTGTC
CCTGGAACGCATGGCAAAGCACCAGTTGGTTCAGCTCGGGGAGACCAATGGGATGAAAGG
GAACTCAAGAAGCAAAAACGAAAGCAGTCTAATAGAGAATCAGCACGCAGATCCCGGCTG
CGCAAACAGGCTGAGTGCGAGGAGCTTGGGCAACGTGCTGAAGCTTTGAGGTCGGAGAAC
TCCTCTCTCAGGGCCGAGCTTGAGCGGATCAGAAAGGAGTATGAACAGCTACTTTCACAG
AATGCTTCCCTCAAGGAAAAGCTGGGGGCCACCAGTGATTCTATTCCTGATATGAATGAA
AAGAACGACGGCGACGGCAGCTACAAGAGACAACATGATTCCGATGCCCAGTCTTGACCC
GTTTAGCCCAGGATTCTTGGAATGCACATTGCTATTTATTTTCTTGAACAACATAGGAAA
GAGAATTATTTATGTAACTCTACCTCCTCGACTGATCGACTAACGTCTCTGACGGCATGT
ATATAACATATATGCCCTCACTGCTGTACCAGTAATTTAGGAATTACAGACAAAAAGGGA
AAACTTACTTGATGTTGTTCGAGATGGACTACAGCTTGACTAAAAAAGCAGCTATGTACG
AAAGTGCAAAGTACACCAGTTGCATGCATCCTCCAT