Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04392
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:4:1510543:1513416:1 gene:SORBI_3004G019100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTGCTGCACCGGCACGCATCTTCTCCTTCTCCTCCGTGGAGCCTCTTCTCCTTGCA
GCTTCGCCGGCGGCAGCTAGAAACAACAGCCGGCAAGGCCGCCACCGTGGCGATTCCATC
CGCCCTTCTTCGGCTGCAGCGGCCAACACGCTGCTGCTGCGTAATGACATCGACCTCCAG
GAGGGATTGACAGACATCCAAAAGATTCTGCATCAACGTCAGAAGAATGCCCGGGAGATG
ATGATCACCATCGATAACCTCAAGCGCCTCTGCATCGACCACTACTTTGAGGAAGAGATC
GAGAGCGCCATGAGCAGCACATGCATGGATCTCATCCACAGCGATGATCTCTTCGATGCA
ACACTTGCATTCAGGCTCCTGAGAGAGGCCGGCCATGATGTTTCAGCAAATGATGTTTTA
CGGAGGTTCACTGATGACAGTGGTGAATTCAAGCTTCCTCTTAGCATGGATATCAGAGGG
CTCTTGAGCCTGCATGACATGTCTCACCTGGACATTGGAGGCGAGGTGTTGCTCTACAAG
GCAAAAGAGTTCTCAAGCAAGCACCTTGCATCTGCCATTAGGTACTTGGAGCCAAGCCTT
GCAGAGTATGTGAGACAGTCTCTGGACCACCCCTACCATCTAAGCCTAATGCAGTACAAA
GCTAGGCATCACCTCACCTATCTACAGAGCATGCCCATTAGAGACACTGTAGTGGAGAAA
CTAGCAGTTGCAGAGTTTCAGCTCAATAAATTACTGCATCAGCAAGAAATTCAAGAGGTT
AAAAGATGGTGGATGGACCTAGGATTGGTTCAAGAAATACCTGTGGTGCGGGACCAGGTG
ATGAAATGGTACATGTGGTCCATGACAGCAGTCCAAGGATGTTCGTTCTCCAGATACCGG
GTTGAGATCACAAAAATAATCGCGCTTGTCTATGTTGTGGATGACATATTTGACCTTGTT
GGCACATTAGAAGAGTTGTCCCTTTTCACGGAGGCCGTCAAAGTGTGGAATATGGCGGCT
GCTGATTCACTCCCCAGATGCATGAGGTCATGCTACATGGCTCTTTACACGGTTACAAAT
GAGATCACAGATATGGTCGAAAAGGAGCATGGATTGAACCATGTTAATCATCTTAGAAAA
GCATGGGCAGTGTTGTTTGATGGATTCATGGTTGAGGCGAAGTGGCTAGCAACTGAGCAG
GTTCCAACTGCAGAGGACTACCTGAGAAATGGTGTTGTCACATCAGGAGTGCCGCTTACA
TTTGTACACATATTCATCATGCTAGGGTATGATCAAAGTATCGAAGCACTTATTGACCAG
ATGCCCTCTGTCATCTCTTGCCCAGCCAAGATCCTCCGGCTTTGGGATGACATGGGTAGT
GCAAAGGATGAAGCTCAAGAAGGATTAGATGGTTCATATATGGACTTCTATCTCATGGAG
AACCCTAGATGTGGCCCTAGTGATGTTGAAGCACATATGCGAAACTTGATCGCAAGGGAG
TGGGAGGAGCTGAATAGGGAGTGTTTATGCAAGAGGACATTCTCCTCTAACTTGACACAA
ACTTGCTTGAACGCCGCGAGAATGATCAGTGTCATGTACTCATACAACAAGGAACAGAGG
CTTCTTGTCCTTGAGGACTATGCAAGGATGTTGATACTTTGA

Peptide Sequence

PEP ID

EES04392
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:4:1510543:1513416:1 gene:SORBI_3004G019100 transcript:EES04392 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSAAPARIFSFSSVEPLLLAASPAAARNNSRQGRHRGDSIRPSSAAAANTLLLRNDIDLQ
EGLTDIQKILHQRQKNAREMMITIDNLKRLCIDHYFEEEIESAMSSTCMDLIHSDDLFDA
TLAFRLLREAGHDVSANDVLRRFTDDSGEFKLPLSMDIRGLLSLHDMSHLDIGGEVLLYK
AKEFSSKHLASAIRYLEPSLAEYVRQSLDHPYHLSLMQYKARHHLTYLQSMPIRDTVVEK
LAVAEFQLNKLLHQQEIQEVKRWWMDLGLVQEIPVVRDQVMKWYMWSMTAVQGCSFSRYR
VEITKIIALVYVVDDIFDLVGTLEELSLFTEAVKVWNMAAADSLPRCMRSCYMALYTVTN
EITDMVEKEHGLNHVNHLRKAWAVLFDGFMVEAKWLATEQVPTAEDYLRNGVVTSGVPLT
FVHIFIMLGYDQSIEALIDQMPSVISCPAKILRLWDDMGSAKDEAQEGLDGSYMDFYLME
NPRCGPSDVEAHMRNLIAREWEELNRECLCKRTFSSNLTQTCLNAARMISVMYSYNKEQR
LLVLEDYARMLIL

Transcript Sequence

Transcript ID

EES04392
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:4:1510543:1513416:1 gene:SORBI_3004G019100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAACAGGCATCAGGCAGCAACCACACACTGCATGCACACAGCACTCTCACATTATTACC
AGCTAGCTAGCTTGCTTCGTTTTCTGATTAAGCTAGCTAGCTCTGTTTAGTTGCAATGTC
TGCTGCACCGGCACGCATCTTCTCCTTCTCCTCCGTGGAGCCTCTTCTCCTTGCAGCTTC
GCCGGCGGCAGCTAGAAACAACAGCCGGCAAGGCCGCCACCGTGGCGATTCCATCCGCCC
TTCTTCGGCTGCAGCGGCCAACACGCTGCTGCTGCGTAATGACATCGACCTCCAGGAGGG
ATTGACAGACATCCAAAAGATTCTGCATCAACGTCAGAAGAATGCCCGGGAGATGATGAT
CACCATCGATAACCTCAAGCGCCTCTGCATCGACCACTACTTTGAGGAAGAGATCGAGAG
CGCCATGAGCAGCACATGCATGGATCTCATCCACAGCGATGATCTCTTCGATGCAACACT
TGCATTCAGGCTCCTGAGAGAGGCCGGCCATGATGTTTCAGCAAATGATGTTTTACGGAG
GTTCACTGATGACAGTGGTGAATTCAAGCTTCCTCTTAGCATGGATATCAGAGGGCTCTT
GAGCCTGCATGACATGTCTCACCTGGACATTGGAGGCGAGGTGTTGCTCTACAAGGCAAA
AGAGTTCTCAAGCAAGCACCTTGCATCTGCCATTAGGTACTTGGAGCCAAGCCTTGCAGA
GTATGTGAGACAGTCTCTGGACCACCCCTACCATCTAAGCCTAATGCAGTACAAAGCTAG
GCATCACCTCACCTATCTACAGAGCATGCCCATTAGAGACACTGTAGTGGAGAAACTAGC
AGTTGCAGAGTTTCAGCTCAATAAATTACTGCATCAGCAAGAAATTCAAGAGGTTAAAAG
ATGGTGGATGGACCTAGGATTGGTTCAAGAAATACCTGTGGTGCGGGACCAGGTGATGAA
ATGGTACATGTGGTCCATGACAGCAGTCCAAGGATGTTCGTTCTCCAGATACCGGGTTGA
GATCACAAAAATAATCGCGCTTGTCTATGTTGTGGATGACATATTTGACCTTGTTGGCAC
ATTAGAAGAGTTGTCCCTTTTCACGGAGGCCGTCAAAGTGTGGAATATGGCGGCTGCTGA
TTCACTCCCCAGATGCATGAGGTCATGCTACATGGCTCTTTACACGGTTACAAATGAGAT
CACAGATATGGTCGAAAAGGAGCATGGATTGAACCATGTTAATCATCTTAGAAAAGCATG
GGCAGTGTTGTTTGATGGATTCATGGTTGAGGCGAAGTGGCTAGCAACTGAGCAGGTTCC
AACTGCAGAGGACTACCTGAGAAATGGTGTTGTCACATCAGGAGTGCCGCTTACATTTGT
ACACATATTCATCATGCTAGGGTATGATCAAAGTATCGAAGCACTTATTGACCAGATGCC
CTCTGTCATCTCTTGCCCAGCCAAGATCCTCCGGCTTTGGGATGACATGGGTAGTGCAAA
GGATGAAGCTCAAGAAGGATTAGATGGTTCATATATGGACTTCTATCTCATGGAGAACCC
TAGATGTGGCCCTAGTGATGTTGAAGCACATATGCGAAACTTGATCGCAAGGGAGTGGGA
GGAGCTGAATAGGGAGTGTTTATGCAAGAGGACATTCTCCTCTAACTTGACACAAACTTG
CTTGAACGCCGCGAGAATGATCAGTGTCATGTACTCATACAACAAGGAACAGAGGCTTCT
TGTCCTTGAGGACTATGCAAGGATGTTGATACTTTGAAGTTTTACTCCATAAGAATCCAT
GTGTCATGCCTGATTTATCTCACTCCTTATTAGTTGATACCAATGTAGAAATCAGATCAT
GCAAATTAGATAGCTAGGACTAGAATATTTGGGCAAAGGAAGATGATATATCCATCTTTA
TAGGTGTAACAATAATGTATGATACAATTTTCTTCTTAAAAATATAATATTGA