Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04293
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:74110824:74113049:-1 gene:SORBI_3003G442800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGCTTCCCCCCCTCCGCCGCCTCCTGGCCCTCCGCGGCCACCGCCGCCTCCTC
TCCACCACCACTCCCGCCGCCTCATCCAGCAACCCCCCTACCCCAGAGGCCGTGCTCTAC
GACATCCACAGCCTCTCCAAGGACCCCTCCCAAGCGCTCGCCGTCTTCCGCCGCTCCGCC
GCCGCCGGCCAGCCCGTCAGCTCCGCGGCATACAACCTCACGCTCCGCACCCTCGCATCC
CACCCCTCCTCCGCCCAGCGCCATTTCTGGCCCTTCCTCCGGGAGATGCAAGAGGCTGGC
CACTCCGTCGACCAGGGCACCTACCTCGCCGCCCTCGCCTCCTTCAAGAAGGCCAGCCTC
ACCGCCGACTACGCCTCCCTCACCGCGCACTACAACAAGTTCCGGAAGGGGGCCAACTCC
GCCGCCGCCGCCGCCGCCGCCGCCGCCGCGGAGGCTGTCCGGGACCACGACGCCGCGGGC
CTCGATAGCAGGCTCGCTGACATCGGTCTCCTTCCGCTCACGGAAACCACCGTCATCACG
GTGCTCCGGGAGCTGAGGGAGTATCCGATCAAGGCTCTCGCCTTCTTCAGATGGGCTGAG
CAGCAGCAGGGGTACACGCACAGCTCGGTGGCCTACAATGCCATGGCAAGGGTGCTCGGC
CGGGAGGAGTCGGTGCCAGAGTTTTGGGACTTGATCCAGGAAATTAAGGCTGCCGGGATG
CACGTTGATATCGACACTTACCTCAAGCTGTCCAGGAACTTCCAGAAGCGGCACATGGTC
AGGGAGGCTGTGGAGCTGTATGAGCTCATGATGGATGGCCCTTTCAAGCCATCCCAGCAG
GATGGACCCATCATCATCAGGCGCATCTCGCTGGGGCGGTCACCGGACCTTGAGCTTGTC
AACCGGGTTGTCAACAAGTTTGAAGCCGTCTGGGGCGTCAAGACCAAAGAGTTGCTTGAC
GGGGTCCATAGGGCACTTACCAGTAATGGGAAGTTCGACGAGGCTGCAGAGATTGTGCAA
ACAATGAGGGACCAAGGCCACCAGCCGGACAATGTTACATATAGCCAGTTGGTATATGGT
CTTTGCAAGGCTGGCAAGCTGGAGGATGCTCGCAAGGTGCTCGATGAAATGGAGGCCGAA
GGGTGTGTCCCAGATTTGAAGACTTGGACCCTGTTGATCCAAGGGTACTGTTCAGCTGGG
GATGTGGACAGAGCTGTGCAGTACTTCACTGAGATGATCGAGAAGGGCTTGGACGCGGAT
GCCGATTTGCTGGATGTGATATTGAAAGGTCTGTGTAGCCATGAAAAGGTTGAAGAGGCT
TACTCTTTGTTTGTTGAGATGGTGGATAAGGCTGAGTTGAGGCCTTTTCAAGGCACTTGC
CAGCGTCTAATTGGTGACTTGCTGAGGGTAAACAAACTTGAGGAGGCACTGGCCCTTCTG
AAGACAATGAAAACCTGCAAGTTCCCAGCTTTCGTGGACCCATTCCATCCTTACATTGCC
AAGCATGGGACGGTTGAAGATGCAAGGAACTTTTTCAAGGCCTTGACAGTGAAAACTTCT
CCAGCACCTGCTGTCTACGTGGATGTTCTCAAGTTGTTCTTTGCTGAGGGAAGATACTCT
GAAGCTCAAGAGTTACTGTACAAATGCCCTAACCACATCCGCAAGCACCCCCATGTCACC
AAACTGTTTGAATCAATAAAAGTTGAGAGTGCCTCTGCCTCTTGA

Peptide Sequence

PEP ID

EES04293
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:74110824:74113049:-1 gene:SORBI_3003G442800 transcript:EES04293 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAALPPLRRLLALRGHRRLLSTTTPAASSSNPPTPEAVLYDIHSLSKDPSQALAVFRRSA
AAGQPVSSAAYNLTLRTLASHPSSAQRHFWPFLREMQEAGHSVDQGTYLAALASFKKASL
TADYASLTAHYNKFRKGANSAAAAAAAAAAEAVRDHDAAGLDSRLADIGLLPLTETTVIT
VLRELREYPIKALAFFRWAEQQQGYTHSSVAYNAMARVLGREESVPEFWDLIQEIKAAGM
HVDIDTYLKLSRNFQKRHMVREAVELYELMMDGPFKPSQQDGPIIIRRISLGRSPDLELV
NRVVNKFEAVWGVKTKELLDGVHRALTSNGKFDEAAEIVQTMRDQGHQPDNVTYSQLVYG
LCKAGKLEDARKVLDEMEAEGCVPDLKTWTLLIQGYCSAGDVDRAVQYFTEMIEKGLDAD
ADLLDVILKGLCSHEKVEEAYSLFVEMVDKAELRPFQGTCQRLIGDLLRVNKLEEALALL
KTMKTCKFPAFVDPFHPYIAKHGTVEDARNFFKALTVKTSPAPAVYVDVLKLFFAEGRYS
EAQELLYKCPNHIRKHPHVTKLFESIKVESASAS

Transcript Sequence

Transcript ID

EES04293
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:74110824:74113049:-1 gene:SORBI_3003G442800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCGCCGCAAACCCCTAAAGTAAACAAATGGCGGCGCTTCCCCCCCTCCGCCGCCTCCTGG
CCCTCCGCGGCCACCGCCGCCTCCTCTCCACCACCACTCCCGCCGCCTCATCCAGCAACC
CCCCTACCCCAGAGGCCGTGCTCTACGACATCCACAGCCTCTCCAAGGACCCCTCCCAAG
CGCTCGCCGTCTTCCGCCGCTCCGCCGCCGCCGGCCAGCCCGTCAGCTCCGCGGCATACA
ACCTCACGCTCCGCACCCTCGCATCCCACCCCTCCTCCGCCCAGCGCCATTTCTGGCCCT
TCCTCCGGGAGATGCAAGAGGCTGGCCACTCCGTCGACCAGGGCACCTACCTCGCCGCCC
TCGCCTCCTTCAAGAAGGCCAGCCTCACCGCCGACTACGCCTCCCTCACCGCGCACTACA
ACAAGTTCCGGAAGGGGGCCAACTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGGAGG
CTGTCCGGGACCACGACGCCGCGGGCCTCGATAGCAGGCTCGCTGACATCGGTCTCCTTC
CGCTCACGGAAACCACCGTCATCACGGTGCTCCGGGAGCTGAGGGAGTATCCGATCAAGG
CTCTCGCCTTCTTCAGATGGGCTGAGCAGCAGCAGGGGTACACGCACAGCTCGGTGGCCT
ACAATGCCATGGCAAGGGTGCTCGGCCGGGAGGAGTCGGTGCCAGAGTTTTGGGACTTGA
TCCAGGAAATTAAGGCTGCCGGGATGCACGTTGATATCGACACTTACCTCAAGCTGTCCA
GGAACTTCCAGAAGCGGCACATGGTCAGGGAGGCTGTGGAGCTGTATGAGCTCATGATGG
ATGGCCCTTTCAAGCCATCCCAGCAGGATGGACCCATCATCATCAGGCGCATCTCGCTGG
GGCGGTCACCGGACCTTGAGCTTGTCAACCGGGTTGTCAACAAGTTTGAAGCCGTCTGGG
GCGTCAAGACCAAAGAGTTGCTTGACGGGGTCCATAGGGCACTTACCAGTAATGGGAAGT
TCGACGAGGCTGCAGAGATTGTGCAAACAATGAGGGACCAAGGCCACCAGCCGGACAATG
TTACATATAGCCAGTTGGTATATGGTCTTTGCAAGGCTGGCAAGCTGGAGGATGCTCGCA
AGGTGCTCGATGAAATGGAGGCCGAAGGGTGTGTCCCAGATTTGAAGACTTGGACCCTGT
TGATCCAAGGGTACTGTTCAGCTGGGGATGTGGACAGAGCTGTGCAGTACTTCACTGAGA
TGATCGAGAAGGGCTTGGACGCGGATGCCGATTTGCTGGATGTGATATTGAAAGGTCTGT
GTAGCCATGAAAAGGTTGAAGAGGCTTACTCTTTGTTTGTTGAGATGGTGGATAAGGCTG
AGTTGAGGCCTTTTCAAGGCACTTGCCAGCGTCTAATTGGTGACTTGCTGAGGGTAAACA
AACTTGAGGAGGCACTGGCCCTTCTGAAGACAATGAAAACCTGCAAGTTCCCAGCTTTCG
TGGACCCATTCCATCCTTACATTGCCAAGCATGGGACGGTTGAAGATGCAAGGAACTTTT
TCAAGGCCTTGACAGTGAAAACTTCTCCAGCACCTGCTGTCTACGTGGATGTTCTCAAGT
TGTTCTTTGCTGAGGGAAGATACTCTGAAGCTCAAGAGTTACTGTACAAATGCCCTAACC
ACATCCGCAAGCACCCCCATGTCACCAAACTGTTTGAATCAATAAAAGTTGAGAGTGCCT
CTGCCTCTTGATTGGGTTCAAGCAAGCAATGATTGGTGAGATTATGGTGAACCCTTAGCT
TTGCATGCTAGCTAGCTTTCTGTTTTTAAGTAGCCTTGGTATTGGGTATTTTTATCAAAT
ACTCCATCTTCTAATGATATATGGTTCAGCTAAGTCGAATTTTAGTATATAGGAAGGTGC
CACTGCCAACTGGCATGTACTTGAAACTGTTTTTGTTTGTTCTAGTCATTGTTGCTACTT
GCTAGTATCATTGCAGCTATGCAGATGGATTTTCCTTCAAAATGACTAAAATGAATCAAA
GCACCTGCTCAGTTTGAACACCATGTTTGTTATACTGACAATTATCATTTCAGGAGCTCT
GAAAAGCAAATGCTTTGACAAATAAGTTTATATGGTTGCAATCACCAACAGTATTGCTTA
ATATTACTACATGCCACAATCATTTGATCTGGTGTAATGTCTGATGCATTTTAACATGAC
AATTTT