Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04242
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:73361136:73363719:-1 gene:SORBI_3003G431100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCTCCGCGAAACTGCCCGTCTCGAAGGGCATCGCCGGCATGGACAACGACGTC
GTCGCGGCGGGCGGCGGCAAGAAGGCGGGAAGGTGGGGGTTCGTGCAGTTCTTCTTCGTG
CTCGCCGTCGTCCTCTGCGTGCTCCTCTACGCACCGCGTGTCCTCGTGCTCAGCCCGTAC
GGGTACAGCATCGACGTCGGGCTCCTCGCGCCCACGACGACCTCTTCCTCTTCGTCGTCG
GTGCCGGCGCCGCAGCAGCAGCAGCGCGTTTCTGGCGGCGGCAATGCAGGAGGAGGCGAC
GGCGGACACGGCCGTGATGATGAGGTGGTCCTTGACAACGAGGTGCACTCCCCGTGCTCG
TCCATGCGCGACAACACCATCTGCTGCGACCGCTCGAGCGTACACACGGACGTGTGCTTC
ATGTCCGGCGACGTGCGCACGGACGCCGCGTCGCTGTCGCTCCTGCTGTTCCCGCCGCAA
CAGCACCGGCATGATCAGGCTTTGAACGGCACGTCGGAGGAGGAGACGGTGCGGCCCTAC
CCGCGGAAGTGGGAGAGCTTCATCATGGACAAGGTCCCCGAGGTGCGGCTCCGTGTGGCG
GCGCCGCGGGGAGCCGAGGAGGATCACCGGTGCGACGTCCAGCACGACGCGCCGTTGCTC
GTCATGTCCGCGGGGGGATACACCGGCAACCTGTTCCACGCGTTCAACGACGGGTTCCTG
CCGTCGTGGGTGACGGTGCAGCACCTCCGCCGGCGCGTCGTGCTCGGGGTGCTCTCGTAC
AACCCCTGGTGGGCCGGCATGTTCAGCGAGGTCATCTCCGGCCTCTCCGACCACCACGTG
GTTGACCTCCTCCACGACACGCGCACGCACTGCTTCCCGGGCGCCATCGTGGGGACCCGC
TACCACGGCATCCTCGTCGTAGACTCCGCCAGGCTCCGGGACAACAAGACCATCGTTGAC
TTCCACCAGATGCTCGCCGACGCGTACGAGAGGCCGCCACGGGAGACGACGACGACGACG
ACAGTAGAGCAGCGGCGGCGGCCAAGGCTGGGGATCGTGTCGCGCAAGGGGACGCGGGTG
ATCGAGAACCAGGCGGCGGTGGCGCGGCTGGCGTCGTCGGTGGGGTTCGACGTGGAAATC
CTGGAGACGGCGGACGGTCGGCCGCTCTCGACGTGGTACGCGTCGCTGCGCGCCTGCGAC
GCGCTGGTGGGCGTGCACGGCGCGGACCTGACCAAGTTCCTGTTCCTGCGGCCGGGGCAC
GCGTCGCTGACCCAGATCGCGCCGCTGGGGGTGTCCCCGATCGCGCAGGAGGACTTCGGT
GTCCCCGCCGCCCGGATGGGGCTGGAGTACGAGCAGTACGAGGTGCGCGCCGGCGAGAGC
TCGCTGGCGCGCCTCTACGCGGCGGACGACGCGGTGCTGGCCGACCCGGAGAAGGCGATG
CGGGAACAGGGATGGGACCTCGTGGCGCGCGTCTACCTCGGCGGCCAGAACGTCACCCTT
GACCTCGCTAGGTTCCGCCGGACGCTGGCGAGGATGCACGCGCACGCGTTGCAGCAGCGG
CGGCGCCGGCGGGAGAGACGGTGA

Peptide Sequence

PEP ID

EES04242
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:73361136:73363719:-1 gene:SORBI_3003G431100 transcript:EES04242 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASAKLPVSKGIAGMDNDVVAAGGGKKAGRWGFVQFFFVLAVVLCVLLYAPRVLVLSPY
GYSIDVGLLAPTTTSSSSSSVPAPQQQQRVSGGGNAGGGDGGHGRDDEVVLDNEVHSPCS
SMRDNTICCDRSSVHTDVCFMSGDVRTDAASLSLLLFPPQQHRHDQALNGTSEEETVRPY
PRKWESFIMDKVPEVRLRVAAPRGAEEDHRCDVQHDAPLLVMSAGGYTGNLFHAFNDGFL
PSWVTVQHLRRRVVLGVLSYNPWWAGMFSEVISGLSDHHVVDLLHDTRTHCFPGAIVGTR
YHGILVVDSARLRDNKTIVDFHQMLADAYERPPRETTTTTTVEQRRRPRLGIVSRKGTRV
IENQAAVARLASSVGFDVEILETADGRPLSTWYASLRACDALVGVHGADLTKFLFLRPGH
ASLTQIAPLGVSPIAQEDFGVPAARMGLEYEQYEVRAGESSLARLYAADDAVLADPEKAM
REQGWDLVARVYLGGQNVTLDLARFRRTLARMHAHALQQRRRRRERR

Transcript Sequence

Transcript ID

EES04242
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:73361136:73363719:-1 gene:SORBI_3003G431100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAACCTGGAAGACTTGAATTGATCCACGCGCTACAACCTAATTGACGTGTCAAATTAAAT
AAAGCTAGTAGCTTTCTACACGCAGGAGACTAGACTGAAAGAGGCACGGCTGCAGGTGCC
AAAACGGCGCACGTCTGCCAGCAGAGAAGCTGCCTGAAACTGACGCTAGCGGCCATAGCA
TAGAAATCCTTGGCCTCCTCAATCCGCAGACTCTTCTTCGTTCGGCAGCGACCGCGCCGC
CCTGTCCCTACCCTGTGCCTGCGCGACGACTCCATCATCTTCTCTCTCGCCAAGTCCTTA
TAACCCCGGCCCGACGCAAGAGTGAGACAAATGCCGGCCACAACGACCTAGCTACCTCAT
CCCATTCGATCGCGTCCGTTCCATTCCAAACCAACCGGCCGGCGGAGCGTGGCATGGCGG
CCTCCGCGAAACTGCCCGTCTCGAAGGGCATCGCCGGCATGGACAACGACGTCGTCGCGG
CGGGCGGCGGCAAGAAGGCGGGAAGGTGGGGGTTCGTGCAGTTCTTCTTCGTGCTCGCCG
TCGTCCTCTGCGTGCTCCTCTACGCACCGCGTGTCCTCGTGCTCAGCCCGTACGGGTACA
GCATCGACGTCGGGCTCCTCGCGCCCACGACGACCTCTTCCTCTTCGTCGTCGGTGCCGG
CGCCGCAGCAGCAGCAGCGCGTTTCTGGCGGCGGCAATGCAGGAGGAGGCGACGGCGGAC
ACGGCCGTGATGATGAGGTGGTCCTTGACAACGAGGTGCACTCCCCGTGCTCGTCCATGC
GCGACAACACCATCTGCTGCGACCGCTCGAGCGTACACACGGACGTGTGCTTCATGTCCG
GCGACGTGCGCACGGACGCCGCGTCGCTGTCGCTCCTGCTGTTCCCGCCGCAACAGCACC
GGCATGATCAGGCTTTGAACGGCACGTCGGAGGAGGAGACGGTGCGGCCCTACCCGCGGA
AGTGGGAGAGCTTCATCATGGACAAGGTCCCCGAGGTGCGGCTCCGTGTGGCGGCGCCGC
GGGGAGCCGAGGAGGATCACCGGTGCGACGTCCAGCACGACGCGCCGTTGCTCGTCATGT
CCGCGGGGGGATACACCGGCAACCTGTTCCACGCGTTCAACGACGGGTTCCTGCCGTCGT
GGGTGACGGTGCAGCACCTCCGCCGGCGCGTCGTGCTCGGGGTGCTCTCGTACAACCCCT
GGTGGGCCGGCATGTTCAGCGAGGTCATCTCCGGCCTCTCCGACCACCACGTGGTTGACC
TCCTCCACGACACGCGCACGCACTGCTTCCCGGGCGCCATCGTGGGGACCCGCTACCACG
GCATCCTCGTCGTAGACTCCGCCAGGCTCCGGGACAACAAGACCATCGTTGACTTCCACC
AGATGCTCGCCGACGCGTACGAGAGGCCGCCACGGGAGACGACGACGACGACGACAGTAG
AGCAGCGGCGGCGGCCAAGGCTGGGGATCGTGTCGCGCAAGGGGACGCGGGTGATCGAGA
ACCAGGCGGCGGTGGCGCGGCTGGCGTCGTCGGTGGGGTTCGACGTGGAAATCCTGGAGA
CGGCGGACGGTCGGCCGCTCTCGACGTGGTACGCGTCGCTGCGCGCCTGCGACGCGCTGG
TGGGCGTGCACGGCGCGGACCTGACCAAGTTCCTGTTCCTGCGGCCGGGGCACGCGTCGC
TGACCCAGATCGCGCCGCTGGGGGTGTCCCCGATCGCGCAGGAGGACTTCGGTGTCCCCG
CCGCCCGGATGGGGCTGGAGTACGAGCAGTACGAGGTGCGCGCCGGCGAGAGCTCGCTGG
CGCGCCTCTACGCGGCGGACGACGCGGTGCTGGCCGACCCGGAGAAGGCGATGCGGGAAC
AGGGATGGGACCTCGTGGCGCGCGTCTACCTCGGCGGCCAGAACGTCACCCTTGACCTCG
CTAGGTTCCGCCGGACGCTGGCGAGGATGCACGCGCACGCGTTGCAGCAGCGGCGGCGCC
GGCGGGAGAGACGGTGATGGCCGGCCGCGACAGGTATGGCCGGCTAGTGACAGGTACGTA
CTACGGACGGCAGCGCACCGCGGCCGGCCGGCTGTGGCAGGGCATCTCGGGAGCTTGACA
AGTGTTGTGCTCTGGTCACCATATGAATGCATCGTCACGGTACCGTGTAGTAGTGCATTT
TGGATGGATGGGACAGAAGAGGCGTTCGTGTTATTGTGTCCTTTTTGTCGTGTGCCGTGT
GCGTGACGGGGTCGGAAATACGTGGAATATTGCCGACGACCGCTAACGTGACGGTAGCAT
ACCCGATCGAATGTCCGCACACATATGGTGTGACGATGCACCGTTGACACATACTGTATC
TGCAACATTATAAATAACATATCTTGATTATATCTGCATCCTGCATGCATGTATGCATAC
TCACTTTTTTGGGAGTATTATGTTTAGGAATTCTTTTCATGAACCTGTACATGTGGGTGT
GATTCCCTATGCTACACTGACCTCAGAAGTTATATAGAGTTGCTTTGATTTTTTTTAGAT
GGTGTTATATATTTATATTTGCTTTGCTGACCCAACTGAATCTGAATACATACACCTCTG
CCTC