Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

EES04236
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:3:73302465:73307198:-1 gene:SORBI_3003G430100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGGCTCGAGCCCGGCCGCCGCCGGTTGCCGCGCTCCTCCTCCTCGTCCTCCTC
CTAACCGGCGCGGCGGGATCGTCGACGACGACATCAACGACGAGCCCCATCAAGACGGTG
GTGGTGCTGGTGATGGAGAACCGGTCGTTCGACCACATGCTTGGTTGGATGAAGCGGCTG
AACCCCGAGATCGACGGCGTGACGGGCCGGGAGTGGAACCCGGCCAACACGTCGGACCCG
TCGTCGGGGCGCGTCTACTTCGGCGACGGCGCGGCGTACGTGGACCCGGACCCGGGCCAC
TCGTTCCAGGAGATCCGGCAGCAGATCTTCGGCTCCGACGACGCGTCCGGCCCGGCCCGG
ATGGACGGCTTCGTGCAGCAGGCGGCGTCCATCGGCGGCGGCAACATGACCGACGCCGTC
ATGCACGGCTTCGCCCCCGACAGCGTCGCCGTGTACCGCGAGCTGGTGTCGCAGTTCGCC
GTCTGCGACCGGTGGTTCGCGTCCGTGCCGTCGTCCACGCAGCCCAACAGGTTGTTCGTC
CACTCCGGAACGTCCGGCGGCGCCACCAGCAACAACCCGACGCTGCTGGCGGAGGGGTAC
CCGCAGCGGACCATCTTCGACAACCTGCACGACGCCGGGCTGTCCTTCGGCGTCTACTTC
CAGGACGTCCCCGCGGTGCTCTTCTACCGGAACCTCCGGAAGCTCAAGTACCTGCTGGAC
TTCCACCCGCTCCGCCCGTCCTTCGCCGACCACGCCCGCCGTGGCGTCCTCCCCAACTAC
GCCGTCATCGAGCAGCACTACCTGGACTCGAAGCTGGACCCGGCCAACGACGACCACCCG
TCGCACGACGTGTACCAGGGCCAGATGCTCGTCAAGTACGTCTACGAGACGCTGCGCGCG
TCCCCGCAGTGGAACCAGACGCTGCTCGTCATCACCTACGACGAGCACGGCGGCTTCTTC
GACCACGTCCCCACGCCCGTCGCCGGCGTGCCCAGCCCCGACGGCATCGTCGGCCCACCG
CCATACAACTTCACCTTCGACCGACTCGGCGTCCGCGTCCCTGCCATCCTCGTGTCACCC
TGGATCGACAAGGGGACCGTCGTCCACGCTCCGACCGGACCGACGCCGACGTCGCAGTAC
GAGCACTCGTCCATCCCGGCCACGGTGAAGAAGATCTTCAACCTGCCGCAGGGTTTCCTG
ACGAAGCGGGACGCGTGGGCGGGGACGTTTGAGGGCGTCGTGCAGAAGAGGACCGAGCCA
CGGACGGACTGCCCCGAGCAGCTGCCGACGCCGACGAGGATCAGGCAGACGGAGGCCGAC
GAGGAGGCCAAGCTCAGCGAGTTCCAGCAGGAGATCATCCAGCTCGCGTCCGTGCTCAAC
GGGGACCACCAGCTGGCCAGCTTGCAGGACAGGATCAGGGACGAAATGAACGTCAGGGAA
GGCATCGACTACATGAAGGCCGCCGTCAAGCGCTACTTCGAGGCCGGCGCGTCCGCCAGG
CGGATGGGCGTCGACGGCGAGCAGATCGTCAAGATGAGGCCATCCCTCACCACCAGGATC
CAGCGCCCATAG

Peptide Sequence

PEP ID

EES04236
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:3:73302465:73307198:-1 gene:SORBI_3003G430100 transcript:EES04236 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAARARPPPVAALLLLVLLLTGAAGSSTTTSTTSPIKTVVVLVMENRSFDHMLGWMKRL
NPEIDGVTGREWNPANTSDPSSGRVYFGDGAAYVDPDPGHSFQEIRQQIFGSDDASGPAR
MDGFVQQAASIGGGNMTDAVMHGFAPDSVAVYRELVSQFAVCDRWFASVPSSTQPNRLFV
HSGTSGGATSNNPTLLAEGYPQRTIFDNLHDAGLSFGVYFQDVPAVLFYRNLRKLKYLLD
FHPLRPSFADHARRGVLPNYAVIEQHYLDSKLDPANDDHPSHDVYQGQMLVKYVYETLRA
SPQWNQTLLVITYDEHGGFFDHVPTPVAGVPSPDGIVGPPPYNFTFDRLGVRVPAILVSP
WIDKGTVVHAPTGPTPTSQYEHSSIPATVKKIFNLPQGFLTKRDAWAGTFEGVVQKRTEP
RTDCPEQLPTPTRIRQTEADEEAKLSEFQQEIIQLASVLNGDHQLASLQDRIRDEMNVRE
GIDYMKAAVKRYFEAGASARRMGVDGEQIVKMRPSLTTRIQRP

Transcript Sequence

Transcript ID

EES04236
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:3:73302465:73307198:-1 gene:SORBI_3003G430100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCACGAGCACGAGCTCCCAACCCAGAGGCCGCCGTCCTCACACTCCCTCCCTCCCCGAC
CCCACCACTTGGTCGCAGTCGCAGTGAGCGAACAAGCAAGCAACAATGGCGGCGGCTCGA
GCCCGGCCGCCGCCGGTTGCCGCGCTCCTCCTCCTCGTCCTCCTCCTAACCGGCGCGGCG
GGATCGTCGACGACGACATCAACGACGAGCCCCATCAAGACGGTGGTGGTGCTGGTGATG
GAGAACCGGTCGTTCGACCACATGCTTGGTTGGATGAAGCGGCTGAACCCCGAGATCGAC
GGCGTGACGGGCCGGGAGTGGAACCCGGCCAACACGTCGGACCCGTCGTCGGGGCGCGTC
TACTTCGGCGACGGCGCGGCGTACGTGGACCCGGACCCGGGCCACTCGTTCCAGGAGATC
CGGCAGCAGATCTTCGGCTCCGACGACGCGTCCGGCCCGGCCCGGATGGACGGCTTCGTG
CAGCAGGCGGCGTCCATCGGCGGCGGCAACATGACCGACGCCGTCATGCACGGCTTCGCC
CCCGACAGCGTCGCCGTGTACCGCGAGCTGGTGTCGCAGTTCGCCGTCTGCGACCGGTGG
TTCGCGTCCGTGCCGTCGTCCACGCAGCCCAACAGGTTGTTCGTCCACTCCGGAACGTCC
GGCGGCGCCACCAGCAACAACCCGACGCTGCTGGCGGAGGGGTACCCGCAGCGGACCATC
TTCGACAACCTGCACGACGCCGGGCTGTCCTTCGGCGTCTACTTCCAGGACGTCCCCGCG
GTGCTCTTCTACCGGAACCTCCGGAAGCTCAAGTACCTGCTGGACTTCCACCCGCTCCGC
CCGTCCTTCGCCGACCACGCCCGCCGTGGCGTCCTCCCCAACTACGCCGTCATCGAGCAG
CACTACCTGGACTCGAAGCTGGACCCGGCCAACGACGACCACCCGTCGCACGACGTGTAC
CAGGGCCAGATGCTCGTCAAGTACGTCTACGAGACGCTGCGCGCGTCCCCGCAGTGGAAC
CAGACGCTGCTCGTCATCACCTACGACGAGCACGGCGGCTTCTTCGACCACGTCCCCACG
CCCGTCGCCGGCGTGCCCAGCCCCGACGGCATCGTCGGCCCACCGCCATACAACTTCACC
TTCGACCGACTCGGCGTCCGCGTCCCTGCCATCCTCGTGTCACCCTGGATCGACAAGGGG
ACCGTCGTCCACGCTCCGACCGGACCGACGCCGACGTCGCAGTACGAGCACTCGTCCATC
CCGGCCACGGTGAAGAAGATCTTCAACCTGCCGCAGGGTTTCCTGACGAAGCGGGACGCG
TGGGCGGGGACGTTTGAGGGCGTCGTGCAGAAGAGGACCGAGCCACGGACGGACTGCCCC
GAGCAGCTGCCGACGCCGACGAGGATCAGGCAGACGGAGGCCGACGAGGAGGCCAAGCTC
AGCGAGTTCCAGCAGGAGATCATCCAGCTCGCGTCCGTGCTCAACGGGGACCACCAGCTG
GCCAGCTTGCAGGACAGGATCAGGGACGAAATGAACGTCAGGGAAGGCATCGACTACATG
AAGGCCGCCGTCAAGCGCTACTTCGAGGCCGGCGCGTCCGCCAGGCGGATGGGCGTCGAC
GGCGAGCAGATCGTCAAGATGAGGCCATCCCTCACCACCAGGATCCAGCGCCCATAGAGA
CAGATCAAATTAAAGCATATATAGGAATTATTGGACTGGTCATTGTGTTCAGAAATTAAA
TTGGATTCCATATATACGGATCACAGTCAATTAGGATGTGCCCGTGCCCTGTGCTAGATC
AAAACATGGGTGTGCTGTACAAATGAATGCTAATTGGTTTGGAAATACATACAGATTCGC
ACTGTGCTTGGCAGTACTACTGCCAAGAGAGGATTATTGTCCCAAATCGTTGAATGCACT
TATAAAAGGTTCACCTGCTTTT